RNA–Protein interactions for RNA: ENST00000549606.5

CDK4-206, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2 BASIC

Gene CDK4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-206ENST00000549606 RSPH6AQ9H0K4 717 aa21.1■□□□□ 0.97
CDK4-206ENST00000549606 COL15A1P39059 1388 aa21.1■□□□□ 0.97
CDK4-206ENST00000549606 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
CDK4-206ENST00000549606 U2AF1L5P0DN76 240 aaPredicted RBP21.09■□□□□ 0.97
CDK4-206ENST00000549606 CANXP27824 592 aaKnown RBP21.09■□□□□ 0.97
CDK4-206ENST00000549606 U2AF1Q01081 240 aaKnown RBP eCLIP21.09■□□□□ 0.97
CDK4-206ENST00000549606 GPBP1L1Q9HC44 474 aaPredicted RBP21.09■□□□□ 0.97
CDK4-206ENST00000549606 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
CDK4-206ENST00000549606 FCHSD2O94868 740 aa21.08■□□□□ 0.97
CDK4-206ENST00000549606 STARD3NLO95772 234 aa21.08■□□□□ 0.97
CDK4-206ENST00000549606 TM4SF1P30408 202 aa21.08■□□□□ 0.97
CDK4-206ENST00000549606 ZNF790Q6PG37 636 aa21.08■□□□□ 0.97
CDK4-206ENST00000549606 ZNF496Q96IT1 587 aaPredicted RBP21.08■□□□□ 0.97
CDK4-206ENST00000549606 NARFQ9UHQ1 456 aa21.08■□□□□ 0.97
CDK4-206ENST00000549606 ADCY9O60503 1353 aa21.08■□□□□ 0.96
CDK4-206ENST00000549606 POLRMTO00411 1230 aaKnown RBP21.07■□□□□ 0.96
CDK4-206ENST00000549606 KCNA3P22001 575 aa21.06■□□□□ 0.96
CDK4-206ENST00000549606 ARHGAP27Q6ZUM4 889 aa21.06■□□□□ 0.96
CDK4-206ENST00000549606 HEG1Q9ULI3 1381 aa21.06■□□□□ 0.96
CDK4-206ENST00000549606 PIM2Q9P1W9 311 aa21.05■□□□□ 0.96
CDK4-206ENST00000549606 AFDNP55196 1824 aaKnown RBP21.04■□□□□ 0.96
CDK4-206ENST00000549606 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
CDK4-206ENST00000549606 TEX13AQ9BXU3 409 aaPredicted RBP21.04■□□□□ 0.96
CDK4-206ENST00000549606 CEMIPQ8WUJ3 1361 aa21.04■□□□□ 0.96
CDK4-206ENST00000549606 CHRNA5P30532 468 aa21.03■□□□□ 0.96
CDK4-206ENST00000549606 NFIXQ14938 502 aa21.03■□□□□ 0.96
CDK4-206ENST00000549606 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
CDK4-206ENST00000549606 ZNF330Q9Y3S2 320 aaPredicted RBP21.03■□□□□ 0.96
CDK4-206ENST00000549606 ARFGEF1Q9Y6D6 1849 aa21.03■□□□□ 0.96
CDK4-206ENST00000549606 KCNQ3O43525 872 aa21.02■□□□□ 0.96
CDK4-206ENST00000549606 EIF5P55010 431 aaKnown RBP21.02■□□□□ 0.96
CDK4-206ENST00000549606 RTF1Q92541 710 aaKnown RBP21.02■□□□□ 0.96
CDK4-206ENST00000549606 BCL2L12Q9HB09 334 aa21.02■□□□□ 0.96
CDK4-206ENST00000549606 A0A087WZG4 1122 aa21.01■□□□□ 0.95
CDK4-206ENST00000549606 DALRD3Q5D0E6 543 aaKnown RBP21.01■□□□□ 0.95
CDK4-206ENST00000549606 MCM10Q7L590 875 aa21.01■□□□□ 0.95
CDK4-206ENST00000549606 SERPINB2P05120 415 aa21■□□□□ 0.95
CDK4-206ENST00000549606 BICDL1Q6ZP65 573 aa21■□□□□ 0.95
CDK4-206ENST00000549606 NRXN2Q9P2S2 1712 aa20.99■□□□□ 0.95
CDK4-206ENST00000549606 A1BGP04217 495 aa20.99■□□□□ 0.95
CDK4-206ENST00000549606 DCTN1Q14203 1278 aa20.98■□□□□ 0.95
CDK4-206ENST00000549606 NPM2Q86SE8 214 aaKnown RBP20.98■□□□□ 0.95
CDK4-206ENST00000549606 TBC1D2BQ9UPU7 963 aa20.98■□□□□ 0.95
CDK4-206ENST00000549606 IL6STP40189 918 aaPredicted RBP20.97■□□□□ 0.95
CDK4-206ENST00000549606 SCN7AQ01118 1682 aa20.96■□□□□ 0.95
CDK4-206ENST00000549606 NEFMP07197 916 aa20.95■□□□□ 0.94
CDK4-206ENST00000549606 TBC1D9BQ66K14 1250 aa20.95■□□□□ 0.94
CDK4-206ENST00000549606 USP16Q9Y5T5 823 aa20.95■□□□□ 0.94
CDK4-206ENST00000549606 PRAMEF22A3QJZ6 481 aa20.94■□□□□ 0.94
CDK4-206ENST00000549606 HTATSF1O43719 755 aaKnown RBP20.94■□□□□ 0.94
CDK4-206ENST00000549606 C9orf131Q5VYM1 1079 aa20.94■□□□□ 0.94
CDK4-206ENST00000549606 DLG5Q8TDM6 1919 aa20.94■□□□□ 0.94
CDK4-206ENST00000549606 DLEC1Q9Y238 1755 aa20.93■□□□□ 0.94
CDK4-206ENST00000549606 PIP4K2AP48426 406 aaPredicted RBP20.93■□□□□ 0.94
CDK4-206ENST00000549606 KIF3CO14782 793 aa20.92■□□□□ 0.94
CDK4-206ENST00000549606 SNRPA1P09661 255 aaKnown RBP20.92■□□□□ 0.94
CDK4-206ENST00000549606 C2CD5Q86YS7 1000 aa20.92■□□□□ 0.94
CDK4-206ENST00000549606 CARMIL3Q8ND23 1372 aa20.92■□□□□ 0.94
CDK4-206ENST00000549606 H0YIN7 160 aa20.91■□□□□ 0.94
CDK4-206ENST00000549606 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
CDK4-206ENST00000549606 DZIP3Q86Y13 1208 aaKnown RBP20.91■□□□□ 0.94
CDK4-206ENST00000549606 CAMTA2O94983 1202 aa20.9■□□□□ 0.94
CDK4-206ENST00000549606 CCDC24Q8N4L8 307 aa20.9■□□□□ 0.94
CDK4-206ENST00000549606 MIS18AQ9NYP9 233 aa20.9■□□□□ 0.94
CDK4-206ENST00000549606 RNF181Q9P0P0 153 aa20.9■□□□□ 0.94
CDK4-206ENST00000549606 SBF1O95248 1867 aa20.9■□□□□ 0.94
CDK4-206ENST00000549606 BCORQ6W2J9 1755 aa20.9■□□□□ 0.94
CDK4-206ENST00000549606 TTLL6Q8N841 843 aa20.89■□□□□ 0.93
CDK4-206ENST00000549606 SETDB2Q96T68 719 aa20.89■□□□□ 0.93
CDK4-206ENST00000549606 ANKRD31Q8N7Z5 1873 aa20.89■□□□□ 0.93
CDK4-206ENST00000549606 NPHP1O15259 732 aa20.88■□□□□ 0.93
CDK4-206ENST00000549606 PRR5LQ6MZQ0 368 aa20.88■□□□□ 0.93
CDK4-206ENST00000549606 PLEKHF1Q96S99 279 aa20.88■□□□□ 0.93
CDK4-206ENST00000549606 ZNF622Q969S3 477 aaKnown RBP eCLIP20.87■□□□□ 0.93
CDK4-206ENST00000549606 BRIP1Q9BX63 1249 aa20.87■□□□□ 0.93
CDK4-206ENST00000549606 NMRK2Q9NPI5 230 aa20.87■□□□□ 0.93
CDK4-206ENST00000549606 CEP350Q5VT06 3117 aa20.87■□□□□ 0.93
CDK4-206ENST00000549606 PDE6BP35913 854 aa20.86■□□□□ 0.93
CDK4-206ENST00000549606 RASSF7Q02833 373 aa20.86■□□□□ 0.93
CDK4-206ENST00000549606 PNNQ9H307 717 aaKnown RBP20.86■□□□□ 0.93
CDK4-206ENST00000549606 MAPK8IP3Q9UPT6 1336 aa20.85■□□□□ 0.93
CDK4-206ENST00000549606 HSPA6P17066 643 aa20.85■□□□□ 0.93
CDK4-206ENST00000549606 NFE2L2Q16236 605 aa20.85■□□□□ 0.93
CDK4-206ENST00000549606 CNBD1Q8NA66 436 aa20.85■□□□□ 0.93
CDK4-206ENST00000549606 NBPF26B4DH59 902 aa20.84■□□□□ 0.93
CDK4-206ENST00000549606 NBPF10Q6P3W6 841 aaKnown RBP20.84■□□□□ 0.93
CDK4-206ENST00000549606 NBPF15Q8N660 670 aa20.84■□□□□ 0.93
CDK4-206ENST00000549606 KDM3BQ7LBC6 1761 aa20.84■□□□□ 0.93
CDK4-206ENST00000549606 COL11A2P13942 1736 aaPredicted RBP20.84■□□□□ 0.93
CDK4-206ENST00000549606 CCDC88AQ3V6T2 1871 aa20.84■□□□□ 0.93
CDK4-206ENST00000549606 LAMB4A4D0S4 1761 aa20.83■□□□□ 0.93
CDK4-206ENST00000549606 TOMM70O94826 608 aa20.83■□□□□ 0.93
CDK4-206ENST00000549606 ST5P78524 1137 aa20.83■□□□□ 0.93
CDK4-206ENST00000549606 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.93
CDK4-206ENST00000549606 RALBP1Q15311 655 aa20.83■□□□□ 0.93
CDK4-206ENST00000549606 PNISRQ8TF01 805 aaKnown RBP20.83■□□□□ 0.93
CDK4-206ENST00000549606 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.93
CDK4-206ENST00000549606 ZNF219Q9P2Y4 722 aaPredicted RBP20.83■□□□□ 0.93
CDK4-206ENST00000549606 PDZRN3Q9UPQ7 1066 aa20.83■□□□□ 0.93
CDK4-206ENST00000549606 ZNF652Q9Y2D9 606 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms