RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 FKBP8Q14318 412 aa15.26■□□□□ 0.03
TROAP-210ENST00000549534 TAOK3Q9H2K8 898 aa15.26■□□□□ 0.03
TROAP-210ENST00000549534 CYP27B1O15528 508 aa15.25■□□□□ 0.03
TROAP-210ENST00000549534 TM4SF1P30408 202 aa15.25■□□□□ 0.03
TROAP-210ENST00000549534 NKX1-1Q15270 411 aaPredicted RBP15.25■□□□□ 0.03
TROAP-210ENST00000549534 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.25■□□□□ 0.03
TROAP-210ENST00000549534 INSRP06213 1382 aa15.24■□□□□ 0.03
TROAP-210ENST00000549534 NME9Q86XW9 330 aa15.24■□□□□ 0.03
TROAP-210ENST00000549534 SAGE1Q9NXZ1 904 aa15.24■□□□□ 0.03
TROAP-210ENST00000549534 TMOD3Q9NYL9 352 aa15.24■□□□□ 0.03
TROAP-210ENST00000549534 ASAP1Q9ULH1 1129 aa15.24■□□□□ 0.03
TROAP-210ENST00000549534 USP42Q9H9J4 1324 aaKnown RBP15.23■□□□□ 0.03
TROAP-210ENST00000549534 H0YIN7 160 aa15.23■□□□□ 0.03
TROAP-210ENST00000549534 CIAPIN1Q6FI81 312 aa15.23■□□□□ 0.03
TROAP-210ENST00000549534 CTU1Q7Z7A3 348 aaKnown RBP15.23■□□□□ 0.03
TROAP-210ENST00000549534 HPS5Q9UPZ3 1129 aa15.23■□□□□ 0.03
TROAP-210ENST00000549534 ITGB4P16144 1822 aa15.22■□□□□ 0.03
TROAP-210ENST00000549534 HOXC9P31274 260 aa15.22■□□□□ 0.03
TROAP-210ENST00000549534 PKN2Q16513 984 aaKnown RBP15.22■□□□□ 0.03
TROAP-210ENST00000549534 CST9Q5W186 159 aa15.22■□□□□ 0.03
TROAP-210ENST00000549534 C2CD5Q86YS7 1000 aa15.22■□□□□ 0.03
TROAP-210ENST00000549534 A0A0C4DFX4 3053 aa15.22■□□□□ 0.03
TROAP-210ENST00000549534 KDRP35968 1356 aa15.22■□□□□ 0.03
TROAP-210ENST00000549534 NBPF6Q5VWK0 638 aa15.21■□□□□ 0.03
TROAP-210ENST00000549534 SAPCD2Q86UD0 394 aa15.21■□□□□ 0.03
TROAP-210ENST00000549534 NBPF4Q96M43 638 aa15.21■□□□□ 0.03
TROAP-210ENST00000549534 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
TROAP-210ENST00000549534 DLEC1Q9Y238 1755 aa15.21■□□□□ 0.02
TROAP-210ENST00000549534 C21orf2O43822 256 aa15.2■□□□□ 0.02
TROAP-210ENST00000549534 NOGQ13253 232 aa15.2■□□□□ 0.02
TROAP-210ENST00000549534 AKAP4Q5JQC9 854 aa15.2■□□□□ 0.02
TROAP-210ENST00000549534 ATG3Q9NT62 314 aa15.2■□□□□ 0.02
TROAP-210ENST00000549534 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
TROAP-210ENST00000549534 AMPHP49418 695 aa15.18■□□□□ 0.02
TROAP-210ENST00000549534 SOGA3Q5TF21 947 aa15.18■□□□□ 0.02
TROAP-210ENST00000549534 SBNO2Q9Y2G9 1366 aa15.18■□□□□ 0.02
TROAP-210ENST00000549534 ZNF831Q5JPB2 1677 aa15.18■□□□□ 0.02
TROAP-210ENST00000549534 MON2Q7Z3U7 1717 aa15.17■□□□□ 0.02
TROAP-210ENST00000549534 FER1L6Q2WGJ9 1857 aa15.16■□□□□ 0.02
TROAP-210ENST00000549534 SZT2Q5T011 3432 aa15.15■□□□□ 0.02
TROAP-210ENST00000549534 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
TROAP-210ENST00000549534 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
TROAP-210ENST00000549534 COLQQ9Y215 455 aaPredicted RBP15.15■□□□□ 0.02
TROAP-210ENST00000549534 RNF123Q5XPI4 1314 aa15.15■□□□□ 0.02
TROAP-210ENST00000549534 RTL1A6NKG5 1358 aa15.14■□□□□ 0.01
TROAP-210ENST00000549534 FMR1Q06787 632 aaKnown RBP eCLIP15.14■□□□□ 0.01
TROAP-210ENST00000549534 ZNF541Q9H0D2 1346 aa15.14■□□□□ 0.01
TROAP-210ENST00000549534 GPC2Q8N158 579 aa15.13■□□□□ 0.01
TROAP-210ENST00000549534 ZNF622Q969S3 477 aaKnown RBP eCLIP15.13■□□□□ 0.01
TROAP-210ENST00000549534 ZPR1O75312 459 aa15.12■□□□□ 0.01
TROAP-210ENST00000549534 SERPINB2P05120 415 aa15.12■□□□□ 0.01
TROAP-210ENST00000549534 RBM42Q9BTD8 480 aaKnown RBP15.12■□□□□ 0.01
TROAP-210ENST00000549534 RGPD2P0DJD1 1756 aa15.11■□□□□ 0.01
TROAP-210ENST00000549534 TRAF5O00463 557 aa15.11■□□□□ 0.01
TROAP-210ENST00000549534 NFIXQ14938 502 aa15.11■□□□□ 0.01
TROAP-210ENST00000549534 SPG7Q9UQ90 795 aa15.11■□□□□ 0.01
TROAP-210ENST00000549534 COL5A3P25940 1745 aaPredicted RBP15.11■□□□□ 0.01
TROAP-210ENST00000549534 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
TROAP-210ENST00000549534 EDC4Q6P2E9 1401 aaKnown RBP15.1■□□□□ 0.01
TROAP-210ENST00000549534 BICDL1Q6ZP65 573 aa15.1■□□□□ 0.01
TROAP-210ENST00000549534 TRPM7Q96QT4 1865 aa15.1■□□□□ 0.01
TROAP-210ENST00000549534 CELF2O95319 508 aaKnown RBP15.09■□□□□ 0.01
TROAP-210ENST00000549534 LMOD1P29536 600 aaPredicted RBP15.09■□□□□ 0.01
TROAP-210ENST00000549534 PDE6BP35913 854 aa15.09■□□□□ 0.01
TROAP-210ENST00000549534 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
TROAP-210ENST00000549534 USPL1Q5W0Q7 1092 aa15.09■□□□□ 0.01
TROAP-210ENST00000549534 USP50Q70EL3 339 aaPredicted RBP15.09■□□□□ 0.01
TROAP-210ENST00000549534 HDGFL2Q7Z4V5 671 aaPredicted RBP15.09■□□□□ 0.01
TROAP-210ENST00000549534 CNKSR1Q969H4 720 aa15.09■□□□□ 0.01
TROAP-210ENST00000549534 RNF186Q9NXI6 227 aa15.09■□□□□ 0.01
TROAP-210ENST00000549534 FZD9O00144 591 aa15.08■□□□□ 0
TROAP-210ENST00000549534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.08■□□□□ 0
TROAP-210ENST00000549534 MKI67P46013 3256 aaKnown RBP15.08■□□□□ 0
TROAP-210ENST00000549534 ZIC5Q96T25 663 aa15.07■□□□□ 0
TROAP-210ENST00000549534 BRIP1Q9BX63 1249 aa15.07■□□□□ 0
TROAP-210ENST00000549534 TRPA1O75762 1119 aa15.06■□□□□ 0
TROAP-210ENST00000549534 FBXO46Q6PJ61 603 aaPredicted RBP15.05■□□□□ -0
TROAP-210ENST00000549534 IFNL2Q8IZJ0 200 aa15.05■□□□□ -0
TROAP-210ENST00000549534 COG3Q96JB2 828 aa15.05■□□□□ -0
TROAP-210ENST00000549534 CARMIL3Q8ND23 1372 aa15.05■□□□□ -0
TROAP-210ENST00000549534 COL6A3P12111 3177 aa15.04■□□□□ -0
TROAP-210ENST00000549534 MYH14Q7Z406 1995 aaKnown RBP15.04■□□□□ -0
TROAP-210ENST00000549534 AFDNP55196 1824 aaKnown RBP15.04■□□□□ -0
TROAP-210ENST00000549534 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -0
TROAP-210ENST00000549534 CCDC93Q567U6 631 aa15.04■□□□□ -0
TROAP-210ENST00000549534 STYK1Q6J9G0 422 aa15.04■□□□□ -0
TROAP-210ENST00000549534 NARFQ9UHQ1 456 aa15.04■□□□□ -0
TROAP-210ENST00000549534 HDAC9Q9UKV0 1011 aa15.04■□□□□ -0
TROAP-210ENST00000549534 ERVV-2B6SEH9 535 aa15.03■□□□□ -0
TROAP-210ENST00000549534 INTS3Q68E01 1043 aaKnown RBP15.03■□□□□ -0
TROAP-210ENST00000549534 PRPF40BQ6NWY9 871 aaKnown RBP15.03■□□□□ -0
TROAP-210ENST00000549534 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
TROAP-210ENST00000549534 CCDC102AQ96A19 550 aa15.03■□□□□ -0
TROAP-210ENST00000549534 PHKG2P15735 406 aa15.02■□□□□ -0
TROAP-210ENST00000549534 OTUD5Q96G74 571 aa15.02■□□□□ -0
TROAP-210ENST00000549534 FAM155AB1AL88 458 aaPredicted RBP15.01□□□□□ -0.01
TROAP-210ENST00000549534 KIF23Q02241 960 aaPredicted RBP15.01□□□□□ -0.01
TROAP-210ENST00000549534 INTS5Q6P9B9 1019 aaKnown RBP15.01□□□□□ -0.01
TROAP-210ENST00000549534 TERF2IPQ9NYB0 399 aa15.01□□□□□ -0.01
TROAP-210ENST00000549534 TRIOBPQ9H2D6 2365 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms