RNA–Protein interactions for RNA: ENST00000549077.5

EIF4B-204, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 5

Gene EIF4B, Length 885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-204ENST00000549077 PCDH11XQ9BZA7 1347 aa11.5□□□□□ -0.57
EIF4B-204ENST00000549077 PCDH11YQ9BZA8 1340 aa11.5□□□□□ -0.57
EIF4B-204ENST00000549077 SBNO2Q9Y2G9 1366 aa11.5□□□□□ -0.57
EIF4B-204ENST00000549077 COL6A3P12111 3177 aa11.5□□□□□ -0.57
EIF4B-204ENST00000549077 CD163L1Q9NR16 1453 aa11.5□□□□□ -0.57
EIF4B-204ENST00000549077 FER1L6Q2WGJ9 1857 aa11.49□□□□□ -0.57
EIF4B-204ENST00000549077 KCNA4P22459 653 aa11.49□□□□□ -0.57
EIF4B-204ENST00000549077 HOXC9P31274 260 aa11.49□□□□□ -0.57
EIF4B-204ENST00000549077 TTLL6Q8N841 843 aa11.49□□□□□ -0.57
EIF4B-204ENST00000549077 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
EIF4B-204ENST00000549077 KDRP35968 1356 aa11.49□□□□□ -0.57
EIF4B-204ENST00000549077 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
EIF4B-204ENST00000549077 AFDNP55196 1824 aaKnown RBP11.49□□□□□ -0.57
EIF4B-204ENST00000549077 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
EIF4B-204ENST00000549077 IQCA1LA6NCM1 817 aa11.48□□□□□ -0.57
EIF4B-204ENST00000549077 ECE1P42892 770 aa11.48□□□□□ -0.57
EIF4B-204ENST00000549077 NBPF15Q8N660 670 aa11.48□□□□□ -0.57
EIF4B-204ENST00000549077 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
EIF4B-204ENST00000549077 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
EIF4B-204ENST00000549077 MAP3K19Q56UN5 1328 aa11.48□□□□□ -0.57
EIF4B-204ENST00000549077 CARMIL3Q8ND23 1372 aa11.47□□□□□ -0.57
EIF4B-204ENST00000549077 RPS6KA4O75676 772 aa11.47□□□□□ -0.57
EIF4B-204ENST00000549077 CST9Q5W186 159 aa11.47□□□□□ -0.57
EIF4B-204ENST00000549077 RAPGEF4Q8WZA2 1011 aa11.47□□□□□ -0.57
EIF4B-204ENST00000549077 ZIC5Q96T25 663 aa11.47□□□□□ -0.57
EIF4B-204ENST00000549077 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.57
EIF4B-204ENST00000549077 C21orf2O43822 256 aa11.46□□□□□ -0.57
EIF4B-204ENST00000549077 TATP17735 454 aaPredicted RBP11.46□□□□□ -0.57
EIF4B-204ENST00000549077 TM4SF1P30408 202 aa11.46□□□□□ -0.57
EIF4B-204ENST00000549077 MAP2K2P36507 400 aa11.46□□□□□ -0.57
EIF4B-204ENST00000549077 CIAPIN1Q6FI81 312 aa11.46□□□□□ -0.57
EIF4B-204ENST00000549077 C2CD5Q86YS7 1000 aa11.46□□□□□ -0.57
EIF4B-204ENST00000549077 RNF39Q9H2S5 420 aa11.46□□□□□ -0.57
EIF4B-204ENST00000549077 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
EIF4B-204ENST00000549077 USP42Q9H9J4 1324 aaKnown RBP11.45□□□□□ -0.58
EIF4B-204ENST00000549077 TRAF5O00463 557 aa11.45□□□□□ -0.58
EIF4B-204ENST00000549077 CA12O43570 354 aa11.45□□□□□ -0.58
EIF4B-204ENST00000549077 EPHX2P34913 555 aa11.45□□□□□ -0.58
EIF4B-204ENST00000549077 SLC17A8Q8NDX2 589 aa11.45□□□□□ -0.58
EIF4B-204ENST00000549077 RNF123Q5XPI4 1314 aa11.44□□□□□ -0.58
EIF4B-204ENST00000549077 EVC2Q86UK5 1308 aa11.44□□□□□ -0.58
EIF4B-204ENST00000549077 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
EIF4B-204ENST00000549077 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
EIF4B-204ENST00000549077 TLL2Q9Y6L7 1015 aa11.44□□□□□ -0.58
EIF4B-204ENST00000549077 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
EIF4B-204ENST00000549077 BRPF1P55201 1214 aaPredicted RBP11.43□□□□□ -0.58
EIF4B-204ENST00000549077 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
EIF4B-204ENST00000549077 AMPHP49418 695 aa11.42□□□□□ -0.58
EIF4B-204ENST00000549077 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
EIF4B-204ENST00000549077 TAOK3Q9H2K8 898 aa11.42□□□□□ -0.58
EIF4B-204ENST00000549077 NRXN2Q9P2S2 1712 aa11.42□□□□□ -0.58
EIF4B-204ENST00000549077 TRPM7Q96QT4 1865 aa11.42□□□□□ -0.58
EIF4B-204ENST00000549077 CEP290O15078 2479 aa11.42□□□□□ -0.58
EIF4B-204ENST00000549077 BRCA2P51587 3418 aa11.41□□□□□ -0.58
EIF4B-204ENST00000549077 COL11A2P13942 1736 aaPredicted RBP11.41□□□□□ -0.58
EIF4B-204ENST00000549077 NKX1-1Q15270 411 aaPredicted RBP11.41□□□□□ -0.58
EIF4B-204ENST00000549077 HPS5Q9UPZ3 1129 aa11.41□□□□□ -0.58
EIF4B-204ENST00000549077 RANBP2P49792 3224 aaKnown RBP11.4□□□□□ -0.58
EIF4B-204ENST00000549077 NFIXQ14938 502 aa11.4□□□□□ -0.58
EIF4B-204ENST00000549077 STAC3Q96MF2 364 aa11.4□□□□□ -0.58
EIF4B-204ENST00000549077 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.59
EIF4B-204ENST00000549077 LTBP3Q9NS15 1303 aa11.39□□□□□ -0.59
EIF4B-204ENST00000549077 H0YIN7 160 aa11.39□□□□□ -0.59
EIF4B-204ENST00000549077 RRS1Q15050 365 aaKnown RBP11.39□□□□□ -0.59
EIF4B-204ENST00000549077 USPL1Q5W0Q7 1092 aa11.39□□□□□ -0.59
EIF4B-204ENST00000549077 SMG6Q86US8 1419 aaKnown RBP11.39□□□□□ -0.59
EIF4B-204ENST00000549077 ZNF622Q969S3 477 aaKnown RBP eCLIP11.39□□□□□ -0.59
EIF4B-204ENST00000549077 SLX4Q8IY92 1834 aa11.39□□□□□ -0.59
EIF4B-204ENST00000549077 PITPNM2Q9BZ72 1349 aa11.38□□□□□ -0.59
EIF4B-204ENST00000549077 CACNA1SQ13698 1873 aa11.38□□□□□ -0.59
EIF4B-204ENST00000549077 CRKLP46109 303 aaKnown RBP11.38□□□□□ -0.59
EIF4B-204ENST00000549077 SAPCD2Q86UD0 394 aa11.38□□□□□ -0.59
EIF4B-204ENST00000549077 PNMA8AQ86V59 439 aaPredicted RBP11.38□□□□□ -0.59
EIF4B-204ENST00000549077 CCDC24Q8N4L8 307 aa11.38□□□□□ -0.59
EIF4B-204ENST00000549077 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
EIF4B-204ENST00000549077 ZNF831Q5JPB2 1677 aa11.38□□□□□ -0.59
EIF4B-204ENST00000549077 SCN11AQ9UI33 1791 aa11.38□□□□□ -0.59
EIF4B-204ENST00000549077 SERPINB2P05120 415 aa11.37□□□□□ -0.59
EIF4B-204ENST00000549077 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
EIF4B-204ENST00000549077 HSP90AB2PQ58FF8 381 aa11.35□□□□□ -0.59
EIF4B-204ENST00000549077 CTU1Q7Z7A3 348 aaKnown RBP11.35□□□□□ -0.59
EIF4B-204ENST00000549077 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
EIF4B-204ENST00000549077 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
EIF4B-204ENST00000549077 UNC80Q8N2C7 3258 aa11.35□□□□□ -0.59
EIF4B-204ENST00000549077 HTTP42858 3142 aa11.34□□□□□ -0.59
EIF4B-204ENST00000549077 A0A1W2PP64 1363 aa11.34□□□□□ -0.59
EIF4B-204ENST00000549077 CELF2O95319 508 aaKnown RBP11.34□□□□□ -0.59
EIF4B-204ENST00000549077 INTS5Q6P9B9 1019 aaKnown RBP11.34□□□□□ -0.59
EIF4B-204ENST00000549077 BICDL1Q6ZP65 573 aa11.34□□□□□ -0.59
EIF4B-204ENST00000549077 TMC1Q8TDI8 760 aa11.34□□□□□ -0.59
EIF4B-204ENST00000549077 ZNF277Q9NRM2 450 aaPredicted RBP11.34□□□□□ -0.59
EIF4B-204ENST00000549077 TJP1Q07157 1748 aa11.34□□□□□ -0.59
EIF4B-204ENST00000549077 CENPFP49454 3210 aa11.33□□□□□ -0.59
EIF4B-204ENST00000549077 RTL1A6NKG5 1358 aa11.33□□□□□ -0.6
EIF4B-204ENST00000549077 TRPA1O75762 1119 aa11.33□□□□□ -0.6
EIF4B-204ENST00000549077 OLFM4Q6UX06 510 aa11.33□□□□□ -0.6
EIF4B-204ENST00000549077 INSRP06213 1382 aa11.32□□□□□ -0.6
EIF4B-204ENST00000549077 PTCD1O75127 700 aaKnown RBP11.32□□□□□ -0.6
EIF4B-204ENST00000549077 ZPR1O75312 459 aa11.32□□□□□ -0.6
EIF4B-204ENST00000549077 PHKG2P15735 406 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms