RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 CCDC88AQ3V6T2 1871 aa18.58■□□□□ 0.57
CDX2-202ENST00000548877 USPL1Q5W0Q7 1092 aa18.58■□□□□ 0.56
CDX2-202ENST00000548877 TNS4Q8IZW8 715 aa18.58■□□□□ 0.56
CDX2-202ENST00000548877 NARFQ9UHQ1 456 aa18.58■□□□□ 0.56
CDX2-202ENST00000548877 NFIXQ14938 502 aa18.57■□□□□ 0.56
CDX2-202ENST00000548877 DNAJC10Q8IXB1 793 aa18.57■□□□□ 0.56
CDX2-202ENST00000548877 MRC1P22897 1456 aa18.57■□□□□ 0.56
CDX2-202ENST00000548877 CYP19A1P11511 503 aaPredicted RBP18.56■□□□□ 0.56
CDX2-202ENST00000548877 RASSF7Q02833 373 aa18.56■□□□□ 0.56
CDX2-202ENST00000548877 SULT6B1Q6IMI4 303 aa18.56■□□□□ 0.56
CDX2-202ENST00000548877 SLC52A2Q9HAB3 445 aa18.56■□□□□ 0.56
CDX2-202ENST00000548877 AKAP4Q5JQC9 854 aa18.55■□□□□ 0.56
CDX2-202ENST00000548877 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
CDX2-202ENST00000548877 VIRMAQ69YN4 1812 aaKnown RBP18.55■□□□□ 0.56
CDX2-202ENST00000548877 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
CDX2-202ENST00000548877 IL13P35225 146 aa18.54■□□□□ 0.56
CDX2-202ENST00000548877 TTLL6Q8N841 843 aa18.54■□□□□ 0.56
CDX2-202ENST00000548877 PANK3Q9H999 370 aa18.54■□□□□ 0.56
CDX2-202ENST00000548877 DICER1Q9UPY3 1922 aaKnown RBP18.53■□□□□ 0.56
CDX2-202ENST00000548877 POTECB2RU33 542 aa18.53■□□□□ 0.56
CDX2-202ENST00000548877 SERPINB2P05120 415 aa18.53■□□□□ 0.56
CDX2-202ENST00000548877 VSIG10Q8N0Z9 540 aa18.53■□□□□ 0.56
CDX2-202ENST00000548877 COL15A1P39059 1388 aa18.53■□□□□ 0.56
CDX2-202ENST00000548877 NFKBIEO00221 500 aa18.52■□□□□ 0.56
CDX2-202ENST00000548877 HSPA1AP0DMV8 641 aaKnown RBP18.52■□□□□ 0.56
CDX2-202ENST00000548877 HSPA1BP0DMV9 641 aaKnown RBP18.52■□□□□ 0.56
CDX2-202ENST00000548877 LGR6Q9HBX8 967 aa18.51■□□□□ 0.55
CDX2-202ENST00000548877 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
CDX2-202ENST00000548877 ZBTB1Q9Y2K1 713 aa18.51■□□□□ 0.55
CDX2-202ENST00000548877 UBR2Q8IWV8 1755 aa18.5■□□□□ 0.55
CDX2-202ENST00000548877 FER1L6Q2WGJ9 1857 aa18.5■□□□□ 0.55
CDX2-202ENST00000548877 H0YIN7 160 aa18.5■□□□□ 0.55
CDX2-202ENST00000548877 MORC1Q86VD1 984 aa18.5■□□□□ 0.55
CDX2-202ENST00000548877 C2CD5Q86YS7 1000 aa18.5■□□□□ 0.55
CDX2-202ENST00000548877 RNMTO43148 476 aaKnown RBP18.49■□□□□ 0.55
CDX2-202ENST00000548877 CAPN15O75808 1086 aa18.49■□□□□ 0.55
CDX2-202ENST00000548877 ANKRD31Q8N7Z5 1873 aa18.49■□□□□ 0.55
CDX2-202ENST00000548877 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
CDX2-202ENST00000548877 SLC39A6Q13433 755 aa18.48■□□□□ 0.55
CDX2-202ENST00000548877 DPY19L2Q6NUT2 758 aa18.48■□□□□ 0.55
CDX2-202ENST00000548877 POLR3GLQ9BT43 218 aa18.48■□□□□ 0.55
CDX2-202ENST00000548877 EIF5P55010 431 aaKnown RBP18.47■□□□□ 0.55
CDX2-202ENST00000548877 LTBP3Q9NS15 1303 aa18.46■□□□□ 0.55
CDX2-202ENST00000548877 BRIP1Q9BX63 1249 aa18.45■□□□□ 0.54
CDX2-202ENST00000548877 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
CDX2-202ENST00000548877 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
CDX2-202ENST00000548877 A0A087WZG4 1122 aa18.44■□□□□ 0.54
CDX2-202ENST00000548877 EIF4G2P78344 907 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDX2-202ENST00000548877 STARD3NLO95772 234 aa18.43■□□□□ 0.54
CDX2-202ENST00000548877 PDE6BP35913 854 aa18.43■□□□□ 0.54
CDX2-202ENST00000548877 SCN7AQ01118 1682 aa18.43■□□□□ 0.54
CDX2-202ENST00000548877 COL11A2P13942 1736 aaPredicted RBP18.43■□□□□ 0.54
CDX2-202ENST00000548877 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
CDX2-202ENST00000548877 ERFEQ4G0M1 354 aa18.42■□□□□ 0.54
CDX2-202ENST00000548877 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
CDX2-202ENST00000548877 ARFGEF2Q9Y6D5 1785 aa18.41■□□□□ 0.54
CDX2-202ENST00000548877 HSPA5P11021 654 aaKnown RBP18.41■□□□□ 0.54
CDX2-202ENST00000548877 CANXP27824 592 aaKnown RBP18.41■□□□□ 0.54
CDX2-202ENST00000548877 AMER1Q5JTC6 1135 aaPredicted RBP18.41■□□□□ 0.54
CDX2-202ENST00000548877 TBC1D9BQ66K14 1250 aa18.41■□□□□ 0.54
CDX2-202ENST00000548877 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
CDX2-202ENST00000548877 C21orf2O43822 256 aa18.4■□□□□ 0.54
CDX2-202ENST00000548877 PRR5LQ6MZQ0 368 aa18.4■□□□□ 0.54
CDX2-202ENST00000548877 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
CDX2-202ENST00000548877 SLX4Q8IY92 1834 aa18.39■□□□□ 0.54
CDX2-202ENST00000548877 IL6STP40189 918 aaPredicted RBP18.39■□□□□ 0.53
CDX2-202ENST00000548877 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.53
CDX2-202ENST00000548877 ZNF622Q969S3 477 aaKnown RBP eCLIP18.39■□□□□ 0.53
CDX2-202ENST00000548877 SIPA1L3O60292 1781 aaPredicted RBP18.39■□□□□ 0.53
CDX2-202ENST00000548877 SCN4AP35499 1836 aa18.39■□□□□ 0.53
CDX2-202ENST00000548877 HMOX1P09601 288 aa18.38■□□□□ 0.53
CDX2-202ENST00000548877 STYK1Q6J9G0 422 aa18.38■□□□□ 0.53
CDX2-202ENST00000548877 CNKSR1Q969H4 720 aa18.38■□□□□ 0.53
CDX2-202ENST00000548877 TAOK3Q9H2K8 898 aa18.38■□□□□ 0.53
CDX2-202ENST00000548877 PASKQ96RG2 1323 aa18.38■□□□□ 0.53
CDX2-202ENST00000548877 CNTNAP1P78357 1384 aa18.38■□□□□ 0.53
CDX2-202ENST00000548877 HEG1Q9ULI3 1381 aa18.38■□□□□ 0.53
CDX2-202ENST00000548877 SOGA3Q5TF21 947 aa18.37■□□□□ 0.53
CDX2-202ENST00000548877 ZNF496Q96IT1 587 aaPredicted RBP18.37■□□□□ 0.53
CDX2-202ENST00000548877 L3MBTL3Q96JM7 780 aaPredicted RBP18.37■□□□□ 0.53
CDX2-202ENST00000548877 PRDM10Q9NQV6 1147 aa18.37■□□□□ 0.53
CDX2-202ENST00000548877 DDNO94850 711 aaPredicted RBP18.36■□□□□ 0.53
CDX2-202ENST00000548877 SRGNP10124 158 aa18.36■□□□□ 0.53
CDX2-202ENST00000548877 ZNF790Q6PG37 636 aa18.36■□□□□ 0.53
CDX2-202ENST00000548877 TTC5Q8N0Z6 440 aa18.36■□□□□ 0.53
CDX2-202ENST00000548877 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
CDX2-202ENST00000548877 POTEJP0CG39 1038 aa18.35■□□□□ 0.53
CDX2-202ENST00000548877 MKRN1Q9UHC7 482 aaKnown RBP18.35■□□□□ 0.53
CDX2-202ENST00000548877 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
CDX2-202ENST00000548877 IQCA1LA6NCM1 817 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 FOXN1O15353 648 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 DIAPH1O60610 1272 aaKnown RBP18.34■□□□□ 0.53
CDX2-202ENST00000548877 CAMTA2O94983 1202 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 LDHDQ86WU2 507 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 C7orf43Q8WVR3 580 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 MASTLQ96GX5 879 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 SETDB2Q96T68 719 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 TBC1D2BQ9UPU7 963 aa18.34■□□□□ 0.53
CDX2-202ENST00000548877 CACNA1SQ13698 1873 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms