RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SLC4A9Q96Q91 983 aa11.75□□□□□ -0.53
TROAP-208ENST00000548817 NRXN2Q9P2S2 1712 aa11.74□□□□□ -0.53
TROAP-208ENST00000548817 TNRC18O15417 2968 aaPredicted RBP11.74□□□□□ -0.53
TROAP-208ENST00000548817 IQCA1LA6NCM1 817 aa11.74□□□□□ -0.53
TROAP-208ENST00000548817 RASSF10A6NK89 507 aa11.74□□□□□ -0.53
TROAP-208ENST00000548817 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
TROAP-208ENST00000548817 TM4SF1P30408 202 aa11.74□□□□□ -0.53
TROAP-208ENST00000548817 THSD7BQ9C0I4 1608 aa11.74□□□□□ -0.53
TROAP-208ENST00000548817 SCN4AP35499 1836 aa11.74□□□□□ -0.53
TROAP-208ENST00000548817 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
TROAP-208ENST00000548817 LTBP3Q9NS15 1303 aa11.72□□□□□ -0.53
TROAP-208ENST00000548817 ERFEQ4G0M1 354 aa11.72□□□□□ -0.53
TROAP-208ENST00000548817 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
TROAP-208ENST00000548817 FER1L6Q2WGJ9 1857 aa11.72□□□□□ -0.53
TROAP-208ENST00000548817 AFDNP55196 1824 aaKnown RBP11.72□□□□□ -0.53
TROAP-208ENST00000548817 ADAMTS7Q9UKP4 1686 aa11.71□□□□□ -0.53
TROAP-208ENST00000548817 PPM1GO15355 546 aaPredicted RBP11.71□□□□□ -0.53
TROAP-208ENST00000548817 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
TROAP-208ENST00000548817 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
TROAP-208ENST00000548817 ANKRD26Q9UPS8 1709 aa11.71□□□□□ -0.54
TROAP-208ENST00000548817 ITGBL1O95965 494 aaPredicted RBP11.7□□□□□ -0.54
TROAP-208ENST00000548817 POTEIP0CG38 1075 aa11.7□□□□□ -0.54
TROAP-208ENST00000548817 POTEJP0CG39 1038 aa11.7□□□□□ -0.54
TROAP-208ENST00000548817 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
TROAP-208ENST00000548817 TRIM26Q12899 539 aaPredicted RBP11.7□□□□□ -0.54
TROAP-208ENST00000548817 DEFB115Q30KQ5 88 aa11.7□□□□□ -0.54
TROAP-208ENST00000548817 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
TROAP-208ENST00000548817 BEGAINQ9BUH8 593 aa11.7□□□□□ -0.54
TROAP-208ENST00000548817 KIF20BQ96Q89 1820 aa11.7□□□□□ -0.54
TROAP-208ENST00000548817 WDR33Q9C0J8 1336 aaKnown RBP11.69□□□□□ -0.54
TROAP-208ENST00000548817 H0YIN7 160 aa11.69□□□□□ -0.54
TROAP-208ENST00000548817 ZPR1O75312 459 aa11.69□□□□□ -0.54
TROAP-208ENST00000548817 DDNO94850 711 aaPredicted RBP11.68□□□□□ -0.54
TROAP-208ENST00000548817 C2CD5Q86YS7 1000 aa11.68□□□□□ -0.54
TROAP-208ENST00000548817 TAF1DQ9H5J8 278 aaPredicted RBP11.68□□□□□ -0.54
TROAP-208ENST00000548817 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
TROAP-208ENST00000548817 TJP1Q07157 1748 aa11.68□□□□□ -0.54
TROAP-208ENST00000548817 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
TROAP-208ENST00000548817 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
TROAP-208ENST00000548817 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
TROAP-208ENST00000548817 WASHC2AQ641Q2 1341 aa11.66□□□□□ -0.54
TROAP-208ENST00000548817 CA12O43570 354 aa11.66□□□□□ -0.54
TROAP-208ENST00000548817 ECE1P42892 770 aa11.66□□□□□ -0.54
TROAP-208ENST00000548817 NFIXQ14938 502 aa11.66□□□□□ -0.54
TROAP-208ENST00000548817 SOGA3Q5TF21 947 aa11.66□□□□□ -0.54
TROAP-208ENST00000548817 EYA1Q99502 592 aa11.66□□□□□ -0.54
TROAP-208ENST00000548817 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
TROAP-208ENST00000548817 SERPINB2P05120 415 aa11.65□□□□□ -0.54
TROAP-208ENST00000548817 CABP4P57796 275 aa11.65□□□□□ -0.54
TROAP-208ENST00000548817 USPL1Q5W0Q7 1092 aa11.65□□□□□ -0.54
TROAP-208ENST00000548817 INTS5Q6P9B9 1019 aaKnown RBP11.65□□□□□ -0.54
TROAP-208ENST00000548817 PNMA8AQ86V59 439 aaPredicted RBP11.65□□□□□ -0.54
TROAP-208ENST00000548817 CARD14Q9BXL6 1004 aa11.65□□□□□ -0.54
TROAP-208ENST00000548817 NARFQ9UHQ1 456 aa11.65□□□□□ -0.54
TROAP-208ENST00000548817 SOS1Q07889 1333 aaPredicted RBP11.64□□□□□ -0.55
TROAP-208ENST00000548817 PTCD1O75127 700 aaKnown RBP11.64□□□□□ -0.55
TROAP-208ENST00000548817 PRPF38BQ5VTL8 546 aaKnown RBP11.64□□□□□ -0.55
TROAP-208ENST00000548817 CFAP44Q96MT7 982 aa11.64□□□□□ -0.55
TROAP-208ENST00000548817 MCOLN1Q9GZU1 580 aa11.64□□□□□ -0.55
TROAP-208ENST00000548817 ABT1Q9ULW3 272 aaKnown RBP11.64□□□□□ -0.55
TROAP-208ENST00000548817 LTBP1Q14766 1721 aa11.63□□□□□ -0.55
TROAP-208ENST00000548817 C21orf2O43822 256 aa11.63□□□□□ -0.55
TROAP-208ENST00000548817 PDE6BP35913 854 aa11.63□□□□□ -0.55
TROAP-208ENST00000548817 CAPNS2Q96L46 248 aa11.63□□□□□ -0.55
TROAP-208ENST00000548817 HACL1Q9UJ83 578 aa11.63□□□□□ -0.55
TROAP-208ENST00000548817 ARFGEF2Q9Y6D5 1785 aa11.63□□□□□ -0.55
TROAP-208ENST00000548817 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
TROAP-208ENST00000548817 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
TROAP-208ENST00000548817 MAP2K2P36507 400 aa11.62□□□□□ -0.55
TROAP-208ENST00000548817 TNNT2P45379 298 aaPredicted RBP11.62□□□□□ -0.55
TROAP-208ENST00000548817 EAPPQ56P03 285 aaPredicted RBP11.62□□□□□ -0.55
TROAP-208ENST00000548817 CNTROBQ8N137 903 aa11.62□□□□□ -0.55
TROAP-208ENST00000548817 GPR101Q96P66 508 aaPredicted RBP11.62□□□□□ -0.55
TROAP-208ENST00000548817 BRIP1Q9BX63 1249 aa11.62□□□□□ -0.55
TROAP-208ENST00000548817 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
TROAP-208ENST00000548817 COL11A2P13942 1736 aaPredicted RBP11.62□□□□□ -0.55
TROAP-208ENST00000548817 EPHX2P34913 555 aa11.61□□□□□ -0.55
TROAP-208ENST00000548817 AMOTQ4VCS5 1084 aa11.61□□□□□ -0.55
TROAP-208ENST00000548817 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
TROAP-208ENST00000548817 COL15A1P39059 1388 aa11.61□□□□□ -0.55
TROAP-208ENST00000548817 PLEKHO1Q53GL0 409 aaPredicted RBP11.6□□□□□ -0.55
TROAP-208ENST00000548817 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
TROAP-208ENST00000548817 PCGF6Q9BYE7 350 aa11.6□□□□□ -0.55
TROAP-208ENST00000548817 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
TROAP-208ENST00000548817 DDX21Q9NR30 783 aaKnown RBP eCLIP11.6□□□□□ -0.55
TROAP-208ENST00000548817 POLKQ9UBT6 870 aa11.6□□□□□ -0.55
TROAP-208ENST00000548817 MTHFSP49914 203 aa11.59□□□□□ -0.55
TROAP-208ENST00000548817 STYK1Q6J9G0 422 aa11.59□□□□□ -0.55
TROAP-208ENST00000548817 TRPM7Q96QT4 1865 aa11.58□□□□□ -0.56
TROAP-208ENST00000548817 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.56
TROAP-208ENST00000548817 DGKZQ13574 1117 aa11.58□□□□□ -0.56
TROAP-208ENST00000548817 MAP1SQ66K74 1059 aaPredicted RBP11.58□□□□□ -0.56
TROAP-208ENST00000548817 ZNF530Q6P9A1 599 aaPredicted RBP11.58□□□□□ -0.56
TROAP-208ENST00000548817 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
TROAP-208ENST00000548817 CLSPNQ9HAW4 1339 aa11.58□□□□□ -0.56
TROAP-208ENST00000548817 BRPF1P55201 1214 aaPredicted RBP11.57□□□□□ -0.56
TROAP-208ENST00000548817 EIF4G2P78344 907 aaKnown RBP eCLIP11.57□□□□□ -0.56
TROAP-208ENST00000548817 EIF4A2Q14240 407 aaKnown RBP11.57□□□□□ -0.56
TROAP-208ENST00000548817 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
TROAP-208ENST00000548817 PAXIP1Q6ZW49 1069 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms