RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 FMNL2Q96PY5 1086 aa15.13■□□□□ 0.01
BEST3-209ENST00000548658 SOS1Q07889 1333 aaPredicted RBP15.13■□□□□ 0.01
BEST3-209ENST00000548658 KCPQ6ZWJ8 1503 aa15.12■□□□□ 0.01
BEST3-209ENST00000548658 ZNF496Q96IT1 587 aaPredicted RBP15.12■□□□□ 0.01
BEST3-209ENST00000548658 HEG1Q9ULI3 1381 aa15.11■□□□□ 0.01
BEST3-209ENST00000548658 A0A087WZG4 1122 aa15.11■□□□□ 0.01
BEST3-209ENST00000548658 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
BEST3-209ENST00000548658 NPM2Q86SE8 214 aaKnown RBP15.11■□□□□ 0.01
BEST3-209ENST00000548658 ZNF784Q8NCA9 323 aaPredicted RBP15.11■□□□□ 0.01
BEST3-209ENST00000548658 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
BEST3-209ENST00000548658 NARFQ9UHQ1 456 aa15.11■□□□□ 0.01
BEST3-209ENST00000548658 ZBTB1Q9Y2K1 713 aa15.11■□□□□ 0.01
BEST3-209ENST00000548658 GOLGB1Q14789 3259 aaKnown RBP15.1■□□□□ 0.01
BEST3-209ENST00000548658 FKBP8Q14318 412 aa15.1■□□□□ 0.01
BEST3-209ENST00000548658 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
BEST3-209ENST00000548658 UBR2Q8IWV8 1755 aa15.09■□□□□ 0.01
BEST3-209ENST00000548658 CANXP27824 592 aaKnown RBP15.09■□□□□ 0.01
BEST3-209ENST00000548658 USPL1Q5W0Q7 1092 aa15.09■□□□□ 0.01
BEST3-209ENST00000548658 COL15A1P39059 1388 aa15.09■□□□□ 0.01
BEST3-209ENST00000548658 C4AP0C0L4 1744 aa15.09■□□□□ 0.01
BEST3-209ENST00000548658 TM4SF1P30408 202 aa15.08■□□□□ 0
BEST3-209ENST00000548658 IL6STP40189 918 aaPredicted RBP15.08■□□□□ 0
BEST3-209ENST00000548658 EIF5P55010 431 aaKnown RBP15.08■□□□□ 0
BEST3-209ENST00000548658 TAF7Q15545 349 aaPredicted RBP15.08■□□□□ 0
BEST3-209ENST00000548658 MCM10Q7L590 875 aa15.08■□□□□ 0
BEST3-209ENST00000548658 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
BEST3-209ENST00000548658 SIPA1L3O60292 1781 aaPredicted RBP15.07■□□□□ 0
BEST3-209ENST00000548658 SNRPA1P09661 255 aaKnown RBP15.07■□□□□ 0
BEST3-209ENST00000548658 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
BEST3-209ENST00000548658 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
BEST3-209ENST00000548658 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
BEST3-209ENST00000548658 C10orf71Q711Q0 1435 aa15.07■□□□□ 0
BEST3-209ENST00000548658 KIF13BQ9NQT8 1826 aa15.06■□□□□ 0
BEST3-209ENST00000548658 A0A0G2JLW4 131 aa15.05■□□□□ -0
BEST3-209ENST00000548658 POLRMTO00411 1230 aaKnown RBP15.05■□□□□ -0
BEST3-209ENST00000548658 DDR1Q08345 913 aa15.05■□□□□ -0
BEST3-209ENST00000548658 NFE2L2Q16236 605 aa15.05■□□□□ -0
BEST3-209ENST00000548658 MYBBP1AQ9BQG0 1328 aaKnown RBP15.05■□□□□ -0
BEST3-209ENST00000548658 PXDNLA1KZ92 1463 aa15.04■□□□□ -0
BEST3-209ENST00000548658 KCNQ3O43525 872 aa15.04■□□□□ -0
BEST3-209ENST00000548658 DPEP1P16444 411 aa15.04■□□□□ -0
BEST3-209ENST00000548658 DCTN1Q14203 1278 aa15.04■□□□□ -0
BEST3-209ENST00000548658 NFIXQ14938 502 aa15.04■□□□□ -0
BEST3-209ENST00000548658 PIM2Q9P1W9 311 aa15.04■□□□□ -0
BEST3-209ENST00000548658 BCS1LQ9Y276 419 aa15.04■□□□□ -0
BEST3-209ENST00000548658 ZNF330Q9Y3S2 320 aaPredicted RBP15.04■□□□□ -0
BEST3-209ENST00000548658 USP16Q9Y5T5 823 aa15.03■□□□□ -0
BEST3-209ENST00000548658 A1BGP04217 495 aa15.02■□□□□ -0
BEST3-209ENST00000548658 SERPINB2P05120 415 aa15.02■□□□□ -0
BEST3-209ENST00000548658 BCL2L12Q9HB09 334 aa15.02■□□□□ -0
BEST3-209ENST00000548658 WWC3Q9ULE0 1092 aa15.02■□□□□ -0
BEST3-209ENST00000548658 LMOD3Q0VAK6 560 aa15.01□□□□□ -0.01
BEST3-209ENST00000548658 DALRD3Q5D0E6 543 aaKnown RBP15.01□□□□□ -0.01
BEST3-209ENST00000548658 TBC1D2BQ9UPU7 963 aa15.01□□□□□ -0.01
BEST3-209ENST00000548658 RGL2O15211 777 aa15□□□□□ -0.01
BEST3-209ENST00000548658 KCNA3P22001 575 aa15□□□□□ -0.01
BEST3-209ENST00000548658 CLEC4GQ6UXB4 293 aa15□□□□□ -0.01
BEST3-209ENST00000548658 PDZRN3Q9UPQ7 1066 aa15□□□□□ -0.01
BEST3-209ENST00000548658 RIPK4P57078 832 aa14.99□□□□□ -0.01
BEST3-209ENST00000548658 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
BEST3-209ENST00000548658 BICDL1Q6ZP65 573 aa14.99□□□□□ -0.01
BEST3-209ENST00000548658 ARHGAP27Q6ZUM4 889 aa14.99□□□□□ -0.01
BEST3-209ENST00000548658 DZIP3Q86Y13 1208 aaKnown RBP14.99□□□□□ -0.01
BEST3-209ENST00000548658 SETDB2Q96T68 719 aa14.99□□□□□ -0.01
BEST3-209ENST00000548658 MIS18AQ9NYP9 233 aa14.99□□□□□ -0.01
BEST3-209ENST00000548658 ZNF652Q9Y2D9 606 aa14.99□□□□□ -0.01
BEST3-209ENST00000548658 N4BP2Q86UW6 1770 aaPredicted RBP14.98□□□□□ -0.01
BEST3-209ENST00000548658 TBC1D9BQ66K14 1250 aa14.98□□□□□ -0.01
BEST3-209ENST00000548658 PRKRIP1Q9H875 184 aaPredicted RBP14.98□□□□□ -0.01
BEST3-209ENST00000548658 BABAM1Q9NWV8 329 aa14.98□□□□□ -0.01
BEST3-209ENST00000548658 U3KPZ7 1027 aaPredicted RBP14.98□□□□□ -0.01
BEST3-209ENST00000548658 KIAA1551Q9HCM1 1747 aa14.97□□□□□ -0.01
BEST3-209ENST00000548658 PRAMEF22A3QJZ6 481 aa14.97□□□□□ -0.01
BEST3-209ENST00000548658 H0YIN7 160 aa14.97□□□□□ -0.01
BEST3-209ENST00000548658 GIGYF1O75420 1035 aaPredicted RBP14.97□□□□□ -0.01
BEST3-209ENST00000548658 CAMTA2O94983 1202 aa14.97□□□□□ -0.01
BEST3-209ENST00000548658 TMPOP42166 694 aaKnown RBP14.97□□□□□ -0.01
BEST3-209ENST00000548658 GPBP1L1Q9HC44 474 aaPredicted RBP14.97□□□□□ -0.01
BEST3-209ENST00000548658 DLG5Q8TDM6 1919 aa14.97□□□□□ -0.01
BEST3-209ENST00000548658 CARMIL3Q8ND23 1372 aa14.97□□□□□ -0.01
BEST3-209ENST00000548658 NPHP1O15259 732 aa14.96□□□□□ -0.01
BEST3-209ENST00000548658 CHRNA5P30532 468 aa14.96□□□□□ -0.01
BEST3-209ENST00000548658 PDE6BP35913 854 aa14.96□□□□□ -0.01
BEST3-209ENST00000548658 EIF4A1P60842 406 aaKnown RBP14.96□□□□□ -0.01
BEST3-209ENST00000548658 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
BEST3-209ENST00000548658 BRIP1Q9BX63 1249 aa14.96□□□□□ -0.01
BEST3-209ENST00000548658 ATP10DQ9P241 1426 aa14.95□□□□□ -0.02
BEST3-209ENST00000548658 C1QTNF8P60827 252 aa14.95□□□□□ -0.02
BEST3-209ENST00000548658 THUMPD2Q9BTF0 503 aaKnown RBP14.95□□□□□ -0.02
BEST3-209ENST00000548658 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
BEST3-209ENST00000548658 ADCY9O60503 1353 aa14.95□□□□□ -0.02
BEST3-209ENST00000548658 NRXN2Q9P2S2 1712 aa14.95□□□□□ -0.02
BEST3-209ENST00000548658 NBPF26B4DH59 902 aa14.94□□□□□ -0.02
BEST3-209ENST00000548658 NBPF10Q6P3W6 841 aaKnown RBP14.94□□□□□ -0.02
BEST3-209ENST00000548658 C2CD5Q86YS7 1000 aa14.94□□□□□ -0.02
BEST3-209ENST00000548658 NBPF15Q8N660 670 aa14.94□□□□□ -0.02
BEST3-209ENST00000548658 TTLL6Q8N841 843 aa14.94□□□□□ -0.02
BEST3-209ENST00000548658 CNBD1Q8NA66 436 aa14.94□□□□□ -0.02
BEST3-209ENST00000548658 BRCA1P38398 1863 aaKnown RBP14.94□□□□□ -0.02
BEST3-209ENST00000548658 AFDNP55196 1824 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms