RNA–Protein interactions for RNA: ENST00000548598.5

RACGAP1-213, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-213ENST00000548598 DLG5Q8TDM6 1919 aa22.58■■□□□ 1.21
RACGAP1-213ENST00000548598 SCN7AQ01118 1682 aa22.58■■□□□ 1.2
RACGAP1-213ENST00000548598 DDR1Q08345 913 aa22.56■■□□□ 1.2
RACGAP1-213ENST00000548598 AFDNP55196 1824 aaKnown RBP22.55■■□□□ 1.2
RACGAP1-213ENST00000548598 HTATSF1O43719 755 aaKnown RBP22.55■■□□□ 1.2
RACGAP1-213ENST00000548598 STARD3NLO95772 234 aa22.55■■□□□ 1.2
RACGAP1-213ENST00000548598 USPL1Q5W0Q7 1092 aa22.55■■□□□ 1.2
RACGAP1-213ENST00000548598 NARFQ9UHQ1 456 aa22.55■■□□□ 1.2
RACGAP1-213ENST00000548598 ADCY9O60503 1353 aa22.54■■□□□ 1.2
RACGAP1-213ENST00000548598 POLRMTO00411 1230 aaKnown RBP22.54■■□□□ 1.2
RACGAP1-213ENST00000548598 ZPR1O75312 459 aa22.54■■□□□ 1.2
RACGAP1-213ENST00000548598 TM4SF1P30408 202 aa22.54■■□□□ 1.2
RACGAP1-213ENST00000548598 EIF5P55010 431 aaKnown RBP22.54■■□□□ 1.2
RACGAP1-213ENST00000548598 FMNL2Q96PY5 1086 aa22.54■■□□□ 1.2
RACGAP1-213ENST00000548598 TEX13AQ9BXU3 409 aaPredicted RBP22.54■■□□□ 1.2
RACGAP1-213ENST00000548598 BTBD11A6QL63 1104 aa22.53■■□□□ 1.2
RACGAP1-213ENST00000548598 RTF1Q92541 710 aaKnown RBP22.53■■□□□ 1.2
RACGAP1-213ENST00000548598 PLEKHF1Q96S99 279 aa22.53■■□□□ 1.2
RACGAP1-213ENST00000548598 ARFGEF1Q9Y6D6 1849 aa22.52■■□□□ 1.2
RACGAP1-213ENST00000548598 RALBP1Q15311 655 aa22.52■■□□□ 1.2
RACGAP1-213ENST00000548598 MCM10Q7L590 875 aa22.52■■□□□ 1.2
RACGAP1-213ENST00000548598 BCL2L12Q9HB09 334 aa22.52■■□□□ 1.2
RACGAP1-213ENST00000548598 BCORQ6W2J9 1755 aa22.51■■□□□ 1.19
RACGAP1-213ENST00000548598 KCNQ3O43525 872 aa22.51■■□□□ 1.19
RACGAP1-213ENST00000548598 WWC3Q9ULE0 1092 aa22.51■■□□□ 1.19
RACGAP1-213ENST00000548598 KDM3BQ7LBC6 1761 aa22.5■■□□□ 1.19
RACGAP1-213ENST00000548598 CANXP27824 592 aaKnown RBP22.5■■□□□ 1.19
RACGAP1-213ENST00000548598 LAMB4A4D0S4 1761 aa22.49■■□□□ 1.19
RACGAP1-213ENST00000548598 A0A0G2JLW4 131 aa22.49■■□□□ 1.19
RACGAP1-213ENST00000548598 DCTN1Q14203 1278 aa22.49■■□□□ 1.19
RACGAP1-213ENST00000548598 DLEC1Q9Y238 1755 aa22.48■■□□□ 1.19
RACGAP1-213ENST00000548598 DPEP1P16444 411 aa22.48■■□□□ 1.19
RACGAP1-213ENST00000548598 KCNA3P22001 575 aa22.48■■□□□ 1.19
RACGAP1-213ENST00000548598 IL6STP40189 918 aaPredicted RBP22.48■■□□□ 1.19
RACGAP1-213ENST00000548598 NFIXQ14938 502 aa22.48■■□□□ 1.19
RACGAP1-213ENST00000548598 A0A087WZG4 1122 aa22.47■■□□□ 1.19
RACGAP1-213ENST00000548598 ATP10DQ9P241 1426 aa22.47■■□□□ 1.19
RACGAP1-213ENST00000548598 DDX10Q13206 875 aaKnown RBP22.46■■□□□ 1.19
RACGAP1-213ENST00000548598 NEFMP07197 916 aa22.45■■□□□ 1.18
RACGAP1-213ENST00000548598 NFE2L2Q16236 605 aa22.44■■□□□ 1.18
RACGAP1-213ENST00000548598 MYBBP1AQ9BQG0 1328 aaKnown RBP22.44■■□□□ 1.18
RACGAP1-213ENST00000548598 BCS1LQ9Y276 419 aa22.44■■□□□ 1.18
RACGAP1-213ENST00000548598 PRAMEF22A3QJZ6 481 aa22.43■■□□□ 1.18
RACGAP1-213ENST00000548598 A1BGP04217 495 aa22.43■■□□□ 1.18
RACGAP1-213ENST00000548598 SNRPA1P09661 255 aaKnown RBP22.43■■□□□ 1.18
RACGAP1-213ENST00000548598 TAF7Q15545 349 aaPredicted RBP22.43■■□□□ 1.18
RACGAP1-213ENST00000548598 PNNQ9H307 717 aaKnown RBP22.43■■□□□ 1.18
RACGAP1-213ENST00000548598 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
RACGAP1-213ENST00000548598 ANKRD31Q8N7Z5 1873 aa22.41■■□□□ 1.18
RACGAP1-213ENST00000548598 SERPINB2P05120 415 aa22.41■■□□□ 1.18
RACGAP1-213ENST00000548598 PIM2Q9P1W9 311 aa22.41■■□□□ 1.18
RACGAP1-213ENST00000548598 CARMIL3Q8ND23 1372 aa22.4■■□□□ 1.18
RACGAP1-213ENST00000548598 MAPK8IP3Q9UPT6 1336 aa22.4■■□□□ 1.18
RACGAP1-213ENST00000548598 CAMTA2O94983 1202 aa22.4■■□□□ 1.18
RACGAP1-213ENST00000548598 TBC1D2BQ9UPU7 963 aa22.4■■□□□ 1.18
RACGAP1-213ENST00000548598 CHRNA5P30532 468 aa22.39■■□□□ 1.17
RACGAP1-213ENST00000548598 TBC1D9BQ66K14 1250 aa22.39■■□□□ 1.17
RACGAP1-213ENST00000548598 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.17
RACGAP1-213ENST00000548598 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
RACGAP1-213ENST00000548598 ZNF330Q9Y3S2 320 aaPredicted RBP22.38■■□□□ 1.17
RACGAP1-213ENST00000548598 COL11A2P13942 1736 aaPredicted RBP22.37■■□□□ 1.17
RACGAP1-213ENST00000548598 C1QTNF8P60827 252 aa22.37■■□□□ 1.17
RACGAP1-213ENST00000548598 DALRD3Q5D0E6 543 aaKnown RBP22.37■■□□□ 1.17
RACGAP1-213ENST00000548598 DZIP3Q86Y13 1208 aaKnown RBP22.36■■□□□ 1.17
RACGAP1-213ENST00000548598 MIS18AQ9NYP9 233 aa22.36■■□□□ 1.17
RACGAP1-213ENST00000548598 NBPF26B4DH59 902 aa22.35■■□□□ 1.17
RACGAP1-213ENST00000548598 RGL2O15211 777 aa22.35■■□□□ 1.17
RACGAP1-213ENST00000548598 PIP4K2AP48426 406 aaPredicted RBP22.35■■□□□ 1.17
RACGAP1-213ENST00000548598 NBPF10Q6P3W6 841 aaKnown RBP22.35■■□□□ 1.17
RACGAP1-213ENST00000548598 BICDL1Q6ZP65 573 aa22.35■■□□□ 1.17
RACGAP1-213ENST00000548598 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
RACGAP1-213ENST00000548598 NBPF15Q8N660 670 aa22.35■■□□□ 1.17
RACGAP1-213ENST00000548598 THUMPD2Q9BTF0 503 aaKnown RBP22.35■■□□□ 1.17
RACGAP1-213ENST00000548598 SBF1O95248 1867 aa22.34■■□□□ 1.17
RACGAP1-213ENST00000548598 EIF4A1P60842 406 aaKnown RBP22.33■■□□□ 1.17
RACGAP1-213ENST00000548598 PRR5LQ6MZQ0 368 aa22.33■■□□□ 1.17
RACGAP1-213ENST00000548598 CLEC4GQ6UXB4 293 aa22.33■■□□□ 1.17
RACGAP1-213ENST00000548598 ARHGAP27Q6ZUM4 889 aa22.33■■□□□ 1.17
RACGAP1-213ENST00000548598 PRKRIP1Q9H875 184 aaPredicted RBP22.32■■□□□ 1.16
RACGAP1-213ENST00000548598 GPBP1L1Q9HC44 474 aaPredicted RBP22.32■■□□□ 1.16
RACGAP1-213ENST00000548598 TMPOP42166 694 aaKnown RBP22.31■■□□□ 1.16
RACGAP1-213ENST00000548598 ARFGEF2Q9Y6D5 1785 aa22.3■■□□□ 1.16
RACGAP1-213ENST00000548598 RIPK4P57078 832 aa22.3■■□□□ 1.16
RACGAP1-213ENST00000548598 SETDB2Q96T68 719 aa22.3■■□□□ 1.16
RACGAP1-213ENST00000548598 BRIP1Q9BX63 1249 aa22.3■■□□□ 1.16
RACGAP1-213ENST00000548598 PDZRN3Q9UPQ7 1066 aa22.3■■□□□ 1.16
RACGAP1-213ENST00000548598 C2CD5Q86YS7 1000 aa22.29■■□□□ 1.16
RACGAP1-213ENST00000548598 ZNF652Q9Y2D9 606 aa22.29■■□□□ 1.16
RACGAP1-213ENST00000548598 LMOD3Q0VAK6 560 aa22.28■■□□□ 1.16
RACGAP1-213ENST00000548598 CNBD1Q8NA66 436 aa22.28■■□□□ 1.16
RACGAP1-213ENST00000548598 BABAM1Q9NWV8 329 aa22.28■■□□□ 1.16
RACGAP1-213ENST00000548598 NUP98P52948 1817 aa22.27■■□□□ 1.16
RACGAP1-213ENST00000548598 H0YIN7 160 aa22.27■■□□□ 1.16
RACGAP1-213ENST00000548598 PDE6BP35913 854 aa22.27■■□□□ 1.16
RACGAP1-213ENST00000548598 TTLL6Q8N841 843 aa22.27■■□□□ 1.16
RACGAP1-213ENST00000548598 ZNF526Q8TF50 670 aaPredicted RBP22.27■■□□□ 1.16
RACGAP1-213ENST00000548598 TSPYL4Q9UJ04 414 aa22.26■■□□□ 1.15
RACGAP1-213ENST00000548598 ERBB4Q15303 1308 aa22.26■■□□□ 1.15
RACGAP1-213ENST00000548598 WDR43Q15061 677 aaKnown RBP eCLIP22.25■■□□□ 1.15
RACGAP1-213ENST00000548598 C9orf131Q5VYM1 1079 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms