RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 C5P01031 1676 aa12.64□□□□□ -0.39
USP15-208ENST00000548524 MRC1P22897 1456 aa12.62□□□□□ -0.39
USP15-208ENST00000548524 RPS6KA4O75676 772 aa12.62□□□□□ -0.39
USP15-208ENST00000548524 CRKLP46109 303 aaKnown RBP12.62□□□□□ -0.39
USP15-208ENST00000548524 DNAJC10Q8IXB1 793 aa12.62□□□□□ -0.39
USP15-208ENST00000548524 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
USP15-208ENST00000548524 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
USP15-208ENST00000548524 RFC4P35249 363 aa12.61□□□□□ -0.39
USP15-208ENST00000548524 NUBP1P53384 320 aa12.61□□□□□ -0.39
USP15-208ENST00000548524 ARHGEF1Q92888 912 aaKnown RBP12.61□□□□□ -0.39
USP15-208ENST00000548524 QSER1Q2KHR3 1735 aa12.61□□□□□ -0.39
USP15-208ENST00000548524 BTBD11A6QL63 1104 aa12.6□□□□□ -0.39
USP15-208ENST00000548524 MCM10Q7L590 875 aa12.6□□□□□ -0.39
USP15-208ENST00000548524 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
USP15-208ENST00000548524 HTATSF1O43719 755 aaKnown RBP12.59□□□□□ -0.39
USP15-208ENST00000548524 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
USP15-208ENST00000548524 VSIG10Q8N0Z9 540 aa12.59□□□□□ -0.39
USP15-208ENST00000548524 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
USP15-208ENST00000548524 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 TUBGCP6Q96RT7 1819 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 STARD3NLO95772 234 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.4
USP15-208ENST00000548524 DCTN1Q14203 1278 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 GPR162Q16538 588 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 INTS5Q6P9B9 1019 aaKnown RBP12.58□□□□□ -0.4
USP15-208ENST00000548524 PELP1Q8IZL8 1130 aaKnown RBP12.58□□□□□ -0.4
USP15-208ENST00000548524 NLGN1Q8N2Q7 840 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
USP15-208ENST00000548524 SCN11AQ9UI33 1791 aa12.57□□□□□ -0.4
USP15-208ENST00000548524 MMP10P09238 476 aa12.57□□□□□ -0.4
USP15-208ENST00000548524 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
USP15-208ENST00000548524 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
USP15-208ENST00000548524 PLEKHF1Q96S99 279 aa12.57□□□□□ -0.4
USP15-208ENST00000548524 TEX13AQ9BXU3 409 aaPredicted RBP12.57□□□□□ -0.4
USP15-208ENST00000548524 CD2APQ9Y5K6 639 aa12.57□□□□□ -0.4
USP15-208ENST00000548524 ZPR1O75312 459 aa12.56□□□□□ -0.4
USP15-208ENST00000548524 GYS1P13807 737 aa12.56□□□□□ -0.4
USP15-208ENST00000548524 WDR43Q15061 677 aaKnown RBP eCLIP12.56□□□□□ -0.4
USP15-208ENST00000548524 PRKRIP1Q9H875 184 aaPredicted RBP12.56□□□□□ -0.4
USP15-208ENST00000548524 SRP68Q9UHB9 627 aaKnown RBP12.56□□□□□ -0.4
USP15-208ENST00000548524 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
USP15-208ENST00000548524 ZBTB1Q9Y2K1 713 aa12.56□□□□□ -0.4
USP15-208ENST00000548524 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
USP15-208ENST00000548524 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
USP15-208ENST00000548524 ZNF831Q5JPB2 1677 aa12.55□□□□□ -0.4
USP15-208ENST00000548524 ADAMTS7Q9UKP4 1686 aa12.55□□□□□ -0.4
USP15-208ENST00000548524 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
USP15-208ENST00000548524 KCNQ3O43525 872 aa12.55□□□□□ -0.4
USP15-208ENST00000548524 YY1P25490 414 aa12.55□□□□□ -0.4
USP15-208ENST00000548524 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
USP15-208ENST00000548524 RASEFQ8IZ41 740 aa12.55□□□□□ -0.4
USP15-208ENST00000548524 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
USP15-208ENST00000548524 TAF7Q15545 349 aaPredicted RBP12.54□□□□□ -0.4
USP15-208ENST00000548524 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
USP15-208ENST00000548524 PARP3Q9Y6F1 533 aa12.54□□□□□ -0.4
USP15-208ENST00000548524 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
USP15-208ENST00000548524 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
USP15-208ENST00000548524 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
USP15-208ENST00000548524 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
USP15-208ENST00000548524 PNISRQ8TF01 805 aaKnown RBP12.53□□□□□ -0.4
USP15-208ENST00000548524 ZNF330Q9Y3S2 320 aaPredicted RBP12.53□□□□□ -0.4
USP15-208ENST00000548524 A0A087WZG4 1122 aa12.52□□□□□ -0.41
USP15-208ENST00000548524 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
USP15-208ENST00000548524 RIPK4P57078 832 aa12.52□□□□□ -0.41
USP15-208ENST00000548524 CCDC146Q8IYE0 955 aa12.52□□□□□ -0.41
USP15-208ENST00000548524 THUMPD2Q9BTF0 503 aaKnown RBP12.52□□□□□ -0.41
USP15-208ENST00000548524 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
USP15-208ENST00000548524 COL15A1P39059 1388 aa12.52□□□□□ -0.41
USP15-208ENST00000548524 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
USP15-208ENST00000548524 TJP1Q07157 1748 aa12.51□□□□□ -0.41
USP15-208ENST00000548524 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
USP15-208ENST00000548524 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
USP15-208ENST00000548524 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
USP15-208ENST00000548524 NARFQ9UHQ1 456 aa12.51□□□□□ -0.41
USP15-208ENST00000548524 GRIN3BO60391 1043 aa12.5□□□□□ -0.41
USP15-208ENST00000548524 A1BGP04217 495 aa12.5□□□□□ -0.41
USP15-208ENST00000548524 TMPOP42166 694 aaKnown RBP12.5□□□□□ -0.41
USP15-208ENST00000548524 EIF5P55010 431 aaKnown RBP12.5□□□□□ -0.41
USP15-208ENST00000548524 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
USP15-208ENST00000548524 RUNDC1Q96C34 613 aa12.5□□□□□ -0.41
USP15-208ENST00000548524 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
USP15-208ENST00000548524 USP16Q9Y5T5 823 aa12.5□□□□□ -0.41
USP15-208ENST00000548524 CICQ96RK0 1608 aaPredicted RBP12.49□□□□□ -0.41
USP15-208ENST00000548524 PRAMEF22A3QJZ6 481 aa12.49□□□□□ -0.41
USP15-208ENST00000548524 IL6STP40189 918 aaPredicted RBP12.49□□□□□ -0.41
USP15-208ENST00000548524 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
USP15-208ENST00000548524 RRP7AQ9Y3A4 280 aaKnown RBP12.49□□□□□ -0.41
USP15-208ENST00000548524 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
USP15-208ENST00000548524 TM4SF1P30408 202 aa12.48□□□□□ -0.41
USP15-208ENST00000548524 TGFB2P61812 414 aa12.48□□□□□ -0.41
USP15-208ENST00000548524 DDR1Q08345 913 aa12.48□□□□□ -0.41
USP15-208ENST00000548524 GSE1Q14687 1217 aa12.48□□□□□ -0.41
USP15-208ENST00000548524 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
USP15-208ENST00000548524 TSPYL4Q9UJ04 414 aa12.48□□□□□ -0.41
USP15-208ENST00000548524 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
USP15-208ENST00000548524 POLRMTO00411 1230 aaKnown RBP12.47□□□□□ -0.41
USP15-208ENST00000548524 ANP32CO43423 234 aa12.47□□□□□ -0.41
USP15-208ENST00000548524 PIP4K2AP48426 406 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms