RNA–Protein interactions for RNA: ENST00000548498.5

SLC48A1-206, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 618 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-206ENST00000548498 CRKLP46109 303 aaKnown RBP13.38□□□□□ -0.27
SLC48A1-206ENST00000548498 SMC1BQ8NDV3 1235 aa13.38□□□□□ -0.27
SLC48A1-206ENST00000548498 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-206ENST00000548498 HSPA1AP0DMV8 641 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-206ENST00000548498 HSPA1BP0DMV9 641 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-206ENST00000548498 POLRMTO00411 1230 aaKnown RBP13.36□□□□□ -0.27
SLC48A1-206ENST00000548498 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-206ENST00000548498 TNNT2P45379 298 aaPredicted RBP13.35□□□□□ -0.27
SLC48A1-206ENST00000548498 CABP4P57796 275 aa13.35□□□□□ -0.27
SLC48A1-206ENST00000548498 ZNF530Q6P9A1 599 aaPredicted RBP13.35□□□□□ -0.27
SLC48A1-206ENST00000548498 PANK3Q9H999 370 aa13.35□□□□□ -0.27
SLC48A1-206ENST00000548498 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
SLC48A1-206ENST00000548498 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
SLC48A1-206ENST00000548498 MRC1P22897 1456 aa13.35□□□□□ -0.27
SLC48A1-206ENST00000548498 CARMIL3Q8ND23 1372 aa13.34□□□□□ -0.27
SLC48A1-206ENST00000548498 INTS5Q6P9B9 1019 aaKnown RBP13.34□□□□□ -0.27
SLC48A1-206ENST00000548498 AEBP1Q8IUX7 1158 aa13.34□□□□□ -0.27
SLC48A1-206ENST00000548498 SIPA1L3O60292 1781 aaPredicted RBP13.33□□□□□ -0.28
SLC48A1-206ENST00000548498 BCORQ6W2J9 1755 aa13.33□□□□□ -0.28
SLC48A1-206ENST00000548498 TM4SF1P30408 202 aa13.33□□□□□ -0.28
SLC48A1-206ENST00000548498 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
SLC48A1-206ENST00000548498 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
SLC48A1-206ENST00000548498 SLX4Q8IY92 1834 aa13.33□□□□□ -0.28
SLC48A1-206ENST00000548498 GLTPD2A6NH11 291 aa13.32□□□□□ -0.28
SLC48A1-206ENST00000548498 PER1O15534 1290 aaPredicted RBP13.32□□□□□ -0.28
SLC48A1-206ENST00000548498 LMNB1P20700 586 aa13.32□□□□□ -0.28
SLC48A1-206ENST00000548498 PLEKHO1Q53GL0 409 aaPredicted RBP13.32□□□□□ -0.28
SLC48A1-206ENST00000548498 NFATC2IPQ8NCF5 419 aa13.32□□□□□ -0.28
SLC48A1-206ENST00000548498 SOS1Q07889 1333 aaPredicted RBP13.32□□□□□ -0.28
SLC48A1-206ENST00000548498 SCN4AP35499 1836 aa13.32□□□□□ -0.28
SLC48A1-206ENST00000548498 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
SLC48A1-206ENST00000548498 NFKBIEO00221 500 aa13.31□□□□□ -0.28
SLC48A1-206ENST00000548498 VEGFAP15692 232 aaPredicted RBP13.31□□□□□ -0.28
SLC48A1-206ENST00000548498 MTHFSP49914 203 aa13.31□□□□□ -0.28
SLC48A1-206ENST00000548498 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
SLC48A1-206ENST00000548498 COL15A1P39059 1388 aa13.31□□□□□ -0.28
SLC48A1-206ENST00000548498 POTECB2RU33 542 aa13.3□□□□□ -0.28
SLC48A1-206ENST00000548498 NFIXQ14938 502 aa13.3□□□□□ -0.28
SLC48A1-206ENST00000548498 AMOTQ4VCS5 1084 aa13.29□□□□□ -0.28
SLC48A1-206ENST00000548498 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
SLC48A1-206ENST00000548498 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
SLC48A1-206ENST00000548498 BCL2L12Q9HB09 334 aa13.29□□□□□ -0.28
SLC48A1-206ENST00000548498 ADAMTSL1Q8N6G6 1762 aa13.28□□□□□ -0.28
SLC48A1-206ENST00000548498 ZPR1O75312 459 aa13.28□□□□□ -0.28
SLC48A1-206ENST00000548498 KNSTRNQ9Y448 316 aa13.28□□□□□ -0.28
SLC48A1-206ENST00000548498 C2CD5Q86YS7 1000 aa13.27□□□□□ -0.29
SLC48A1-206ENST00000548498 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
SLC48A1-206ENST00000548498 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.29
SLC48A1-206ENST00000548498 SERPINB2P05120 415 aa13.26□□□□□ -0.29
SLC48A1-206ENST00000548498 CYP19A1P11511 503 aaPredicted RBP13.26□□□□□ -0.29
SLC48A1-206ENST00000548498 TTLL6Q8N841 843 aa13.26□□□□□ -0.29
SLC48A1-206ENST00000548498 MKRN1Q9UHC7 482 aaKnown RBP13.26□□□□□ -0.29
SLC48A1-206ENST00000548498 POTEIP0CG38 1075 aa13.25□□□□□ -0.29
SLC48A1-206ENST00000548498 POTEJP0CG39 1038 aa13.25□□□□□ -0.29
SLC48A1-206ENST00000548498 SLC39A6Q13433 755 aa13.25□□□□□ -0.29
SLC48A1-206ENST00000548498 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
SLC48A1-206ENST00000548498 POLR3GLQ9BT43 218 aa13.25□□□□□ -0.29
SLC48A1-206ENST00000548498 MORC1Q86VD1 984 aa13.24□□□□□ -0.29
SLC48A1-206ENST00000548498 SLC52A2Q9HAB3 445 aa13.24□□□□□ -0.29
SLC48A1-206ENST00000548498 FOXN1O15353 648 aa13.23□□□□□ -0.29
SLC48A1-206ENST00000548498 LGR6Q9HBX8 967 aa13.23□□□□□ -0.29
SLC48A1-206ENST00000548498 CREBZFQ9NS37 354 aa13.23□□□□□ -0.29
SLC48A1-206ENST00000548498 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
SLC48A1-206ENST00000548498 THSD7BQ9C0I4 1608 aa13.23□□□□□ -0.29
SLC48A1-206ENST00000548498 CNTNAP1P78357 1384 aa13.22□□□□□ -0.29
SLC48A1-206ENST00000548498 H0YIN7 160 aa13.22□□□□□ -0.29
SLC48A1-206ENST00000548498 CHADLQ6NUI6 762 aa13.22□□□□□ -0.29
SLC48A1-206ENST00000548498 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
SLC48A1-206ENST00000548498 TRPM7Q96QT4 1865 aa13.22□□□□□ -0.29
SLC48A1-206ENST00000548498 C21orf2O43822 256 aa13.21□□□□□ -0.29
SLC48A1-206ENST00000548498 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
SLC48A1-206ENST00000548498 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
SLC48A1-206ENST00000548498 AKAP4Q5JQC9 854 aa13.21□□□□□ -0.29
SLC48A1-206ENST00000548498 CCDC24Q8N4L8 307 aa13.21□□□□□ -0.29
SLC48A1-206ENST00000548498 DDNO94850 711 aaPredicted RBP13.2□□□□□ -0.3
SLC48A1-206ENST00000548498 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
SLC48A1-206ENST00000548498 IL13P35225 146 aa13.2□□□□□ -0.3
SLC48A1-206ENST00000548498 TBC1D9BQ66K14 1250 aa13.2□□□□□ -0.3
SLC48A1-206ENST00000548498 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
SLC48A1-206ENST00000548498 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLC48A1-206ENST00000548498 PASKQ96RG2 1323 aa13.19□□□□□ -0.3
SLC48A1-206ENST00000548498 LTBP3Q9NS15 1303 aa13.19□□□□□ -0.3
SLC48A1-206ENST00000548498 RNMTO43148 476 aaKnown RBP13.19□□□□□ -0.3
SLC48A1-206ENST00000548498 PRR5LQ6MZQ0 368 aa13.19□□□□□ -0.3
SLC48A1-206ENST00000548498 EIF5P55010 431 aaKnown RBP13.18□□□□□ -0.3
SLC48A1-206ENST00000548498 TAOK3Q9H2K8 898 aa13.18□□□□□ -0.3
SLC48A1-206ENST00000548498 LTBP1Q14766 1721 aa13.18□□□□□ -0.3
SLC48A1-206ENST00000548498 SLC34A2O95436 690 aa13.17□□□□□ -0.3
SLC48A1-206ENST00000548498 PRDM10Q9NQV6 1147 aa13.17□□□□□ -0.3
SLC48A1-206ENST00000548498 HMOX1P09601 288 aa13.16□□□□□ -0.3
SLC48A1-206ENST00000548498 PDE6BP35913 854 aa13.16□□□□□ -0.3
SLC48A1-206ENST00000548498 VEGFBP49765 207 aa13.16□□□□□ -0.3
SLC48A1-206ENST00000548498 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
SLC48A1-206ENST00000548498 BRIP1Q9BX63 1249 aa13.16□□□□□ -0.3
SLC48A1-206ENST00000548498 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
SLC48A1-206ENST00000548498 MTHFSDQ2M296 383 aaKnown RBP13.15□□□□□ -0.3
SLC48A1-206ENST00000548498 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
SLC48A1-206ENST00000548498 TBC1D2BQ9UPU7 963 aa13.15□□□□□ -0.3
SLC48A1-206ENST00000548498 NUP98P52948 1817 aa13.15□□□□□ -0.3
SLC48A1-206ENST00000548498 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms