RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 BRD1O95696 1058 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 GPT2Q8TD30 523 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 KCNB2Q92953 911 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 PHAXQ9H814 394 aaKnown RBP8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 UBR2Q8IWV8 1755 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 SOX12O15370 315 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 CASC1Q6TDU7 716 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 INTS4Q96HW7 963 aaKnown RBP8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 UTYO14607 1347 aa8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 AFDNP55196 1824 aaKnown RBP8.75□□□□□ -1.01
PDZRN4-204ENST00000548316 TSHZ3Q63HK5 1081 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 SLC4A10Q6U841 1118 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 TMX3Q96JJ7 454 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 LGR6Q9HBX8 967 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 TJP1Q07157 1748 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 RPAP1Q9BWH6 1393 aaPredicted RBP8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 PLEKHG2Q9H7P9 1386 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 KCNQ3O43525 872 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 ST18O60284 1047 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 HSPA4P34932 840 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 MCM2P49736 904 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 FKBP5Q13451 457 aaPredicted RBP8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 TTC14Q96N46 770 aa8.74□□□□□ -1.01
PDZRN4-204ENST00000548316 PDLIM2Q96JY6 352 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 ABTB2Q8N961 1025 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 LSG1Q9H089 658 aaKnown RBP8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 SNRKQ9NRH2 765 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 MYH15Q9Y2K3 1946 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 SHANK3Q9BYB0 1731 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 JCADQ9P266 1359 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 ZSCAN23Q3MJ62 389 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 AKAP4Q5JQC9 854 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 ARHGEF25Q86VW2 580 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 USHBP1Q8N6Y0 703 aa8.73□□□□□ -1.01
PDZRN4-204ENST00000548316 APBB1O00213 710 aa8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 HDGFL1Q5TGJ6 251 aa8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 PPP1R42Q7Z4L9 355 aa8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 LAMA4Q16363 1823 aa8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 XIRP1Q702N8 1843 aaKnown RBP8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 RAD50Q92878 1312 aa8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 SGSM2O43147 1006 aa8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 RNMTO43148 476 aaKnown RBP8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 NUTM2GQ5VZR2 741 aa8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 RHPN1Q8TCX5 695 aa8.72□□□□□ -1.01
PDZRN4-204ENST00000548316 DDX60Q8IY21 1712 aaKnown RBP8.71□□□□□ -1.01
PDZRN4-204ENST00000548316 UBTFL1P0CB47 393 aaPredicted RBP8.71□□□□□ -1.01
PDZRN4-204ENST00000548316 TMEM87AQ8NBN3 555 aa8.71□□□□□ -1.01
PDZRN4-204ENST00000548316 NSFL1CQ9UNZ2 370 aaKnown RBP8.71□□□□□ -1.01
PDZRN4-204ENST00000548316 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.01
PDZRN4-204ENST00000548316 NPHP4O75161 1426 aaPredicted RBP8.71□□□□□ -1.01
PDZRN4-204ENST00000548316 NBPF7P0C2Y1 421 aaPredicted RBP8.71□□□□□ -1.02
PDZRN4-204ENST00000548316 CCDC173Q0VFZ6 552 aa8.71□□□□□ -1.02
PDZRN4-204ENST00000548316 MCTP1Q6DN14 999 aa8.71□□□□□ -1.02
PDZRN4-204ENST00000548316 DNAAF4Q8WXU2 420 aa8.71□□□□□ -1.02
PDZRN4-204ENST00000548316 CHPF2Q9P2E5 772 aa8.71□□□□□ -1.02
PDZRN4-204ENST00000548316 ALDH1L1O75891 902 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 KAZALD1Q96I82 304 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 RBSNQ9H1K0 784 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 TTC41PQ6P2S7 1318 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 ESPNB1AK53 854 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 PDIA6Q15084 440 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 KCNH5Q8NCM2 988 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 NECTIN2Q92692 538 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 CHAMP1Q96JM3 812 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 DDX49Q9Y6V7 483 aaKnown RBP8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 COL15A1P39059 1388 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 GOLGA6L22H0YM25 854 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 HSP90AA1P07900 732 aaKnown RBP8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 NEK4P51957 841 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 KIF1BPQ96EK5 621 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 SNX14Q9Y5W7 946 aa8.7□□□□□ -1.02
PDZRN4-204ENST00000548316 GIGYF1O75420 1035 aaPredicted RBP8.69□□□□□ -1.02
PDZRN4-204ENST00000548316 LRP10Q7Z4F1 713 aa8.69□□□□□ -1.02
PDZRN4-204ENST00000548316 TMEM94Q12767 1356 aa8.69□□□□□ -1.02
PDZRN4-204ENST00000548316 C1orf167Q5SNV9 1468 aa8.69□□□□□ -1.02
PDZRN4-204ENST00000548316 AMOTQ4VCS5 1084 aa8.69□□□□□ -1.02
PDZRN4-204ENST00000548316 HS1BP3Q53T59 392 aa8.69□□□□□ -1.02
PDZRN4-204ENST00000548316 NUTM1Q86Y26 1132 aa8.69□□□□□ -1.02
PDZRN4-204ENST00000548316 ABCA3Q99758 1704 aa8.69□□□□□ -1.02
PDZRN4-204ENST00000548316 PROSER3Q2NL68 480 aa8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 LRRC59Q96AG4 307 aaKnown RBP8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 LTV1Q96GA3 475 aaPredicted RBP8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 IL1RAPL2Q9NP60 686 aa8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 PI4KAP2A4QPH2 592 aa8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 ST3GAL1Q11201 340 aa8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 LRSAM1Q6UWE0 723 aa8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 RASEFQ8IZ41 740 aa8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 PI4KAP1Q8N8J0 262 aa8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.68□□□□□ -1.02
PDZRN4-204ENST00000548316 MCCP23508 829 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 NASPP49321 788 aaPredicted RBP8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 ANKLE2Q86XL3 938 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 MEGF6O75095 1541 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 PRPF40AO75400 957 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms