RNA–Protein interactions for RNA: ENST00000548279.5

CACNB3-208, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-208ENST00000548279 C10orf71Q711Q0 1435 aa30.72■■■□□ 2.51
CACNB3-208ENST00000548279 MYBBP1AQ9BQG0 1328 aaKnown RBP30.72■■■□□ 2.51
CACNB3-208ENST00000548279 HTATSF1O43719 755 aaKnown RBP30.71■■■□□ 2.51
CACNB3-208ENST00000548279 FMNL2Q96PY5 1086 aa30.71■■■□□ 2.51
CACNB3-208ENST00000548279 CANXP27824 592 aaKnown RBP30.7■■■□□ 2.51
CACNB3-208ENST00000548279 USPL1Q5W0Q7 1092 aa30.7■■■□□ 2.51
CACNB3-208ENST00000548279 WWC3Q9ULE0 1092 aa30.7■■■□□ 2.51
CACNB3-208ENST00000548279 N4BP2Q86UW6 1770 aaPredicted RBP30.69■■■□□ 2.5
CACNB3-208ENST00000548279 DDR1Q08345 913 aa30.69■■■□□ 2.5
CACNB3-208ENST00000548279 PXDNLA1KZ92 1463 aa30.69■■■□□ 2.5
CACNB3-208ENST00000548279 STARD3NLO95772 234 aa30.68■■■□□ 2.5
CACNB3-208ENST00000548279 PARP3Q9Y6F1 533 aa30.67■■■□□ 2.5
CACNB3-208ENST00000548279 PRAMEF22A3QJZ6 481 aa30.66■■■□□ 2.5
CACNB3-208ENST00000548279 NFE2L2Q16236 605 aa30.66■■■□□ 2.5
CACNB3-208ENST00000548279 BCL2L12Q9HB09 334 aa30.66■■■□□ 2.5
CACNB3-208ENST00000548279 NARFQ9UHQ1 456 aa30.66■■■□□ 2.5
CACNB3-208ENST00000548279 ZPR1O75312 459 aa30.65■■■□□ 2.5
CACNB3-208ENST00000548279 NEFMP07197 916 aa30.65■■■□□ 2.5
CACNB3-208ENST00000548279 EIF5P55010 431 aaKnown RBP30.65■■■□□ 2.5
CACNB3-208ENST00000548279 TEX13AQ9BXU3 409 aaPredicted RBP30.65■■■□□ 2.5
CACNB3-208ENST00000548279 A1BGP04217 495 aa30.64■■■□□ 2.5
CACNB3-208ENST00000548279 TM4SF1P30408 202 aa30.64■■■□□ 2.5
CACNB3-208ENST00000548279 THUMPD2Q9BTF0 503 aaKnown RBP30.64■■■□□ 2.5
CACNB3-208ENST00000548279 KDM3BQ7LBC6 1761 aa30.64■■■□□ 2.49
CACNB3-208ENST00000548279 ZEB1P37275 1124 aaPredicted RBP30.63■■■□□ 2.49
CACNB3-208ENST00000548279 MIS18AQ9NYP9 233 aa30.63■■■□□ 2.49
CACNB3-208ENST00000548279 USP16Q9Y5T5 823 aa30.63■■■□□ 2.49
CACNB3-208ENST00000548279 MAPK8IP3Q9UPT6 1336 aa30.63■■■□□ 2.49
CACNB3-208ENST00000548279 POLRMTO00411 1230 aaKnown RBP30.62■■■□□ 2.49
CACNB3-208ENST00000548279 GRIN3BO60391 1043 aa30.62■■■□□ 2.49
CACNB3-208ENST00000548279 TAF7Q15545 349 aaPredicted RBP30.62■■■□□ 2.49
CACNB3-208ENST00000548279 PRKRIP1Q9H875 184 aaPredicted RBP30.62■■■□□ 2.49
CACNB3-208ENST00000548279 SCN7AQ01118 1682 aa30.62■■■□□ 2.49
CACNB3-208ENST00000548279 AFDNP55196 1824 aaKnown RBP30.61■■■□□ 2.49
CACNB3-208ENST00000548279 PNNQ9H307 717 aaKnown RBP30.6■■■□□ 2.49
CACNB3-208ENST00000548279 A0A0G2JLW4 131 aa30.59■■■□□ 2.49
CACNB3-208ENST00000548279 PIP4K2AP48426 406 aaPredicted RBP30.59■■■□□ 2.49
CACNB3-208ENST00000548279 NFIXQ14938 502 aa30.59■■■□□ 2.49
CACNB3-208ENST00000548279 ZNF784Q8NCA9 323 aaPredicted RBP30.59■■■□□ 2.49
CACNB3-208ENST00000548279 BRCA1P38398 1863 aaKnown RBP30.59■■■□□ 2.49
CACNB3-208ENST00000548279 TGFB2P61812 414 aa30.58■■■□□ 2.49
CACNB3-208ENST00000548279 ZNF330Q9Y3S2 320 aaPredicted RBP30.58■■■□□ 2.49
CACNB3-208ENST00000548279 NRXN2Q9P2S2 1712 aa30.58■■■□□ 2.49
CACNB3-208ENST00000548279 SNRPA1P09661 255 aaKnown RBP30.57■■■□□ 2.48
CACNB3-208ENST00000548279 DPEP1P16444 411 aa30.57■■■□□ 2.48
CACNB3-208ENST00000548279 IL6STP40189 918 aaPredicted RBP30.57■■■□□ 2.48
CACNB3-208ENST00000548279 TBC1D2BQ9UPU7 963 aa30.56■■■□□ 2.48
CACNB3-208ENST00000548279 CCDC146Q8IYE0 955 aa30.55■■■□□ 2.48
CACNB3-208ENST00000548279 LAMB4A4D0S4 1761 aa30.55■■■□□ 2.48
CACNB3-208ENST00000548279 BCORQ6W2J9 1755 aa30.54■■■□□ 2.48
CACNB3-208ENST00000548279 A0A087WZG4 1122 aa30.54■■■□□ 2.48
CACNB3-208ENST00000548279 KCNA3P22001 575 aa30.54■■■□□ 2.48
CACNB3-208ENST00000548279 TMPOP42166 694 aaKnown RBP30.52■■■□□ 2.48
CACNB3-208ENST00000548279 RIPK4P57078 832 aa30.52■■■□□ 2.48
CACNB3-208ENST00000548279 NBPF26B4DH59 902 aa30.5■■■□□ 2.47
CACNB3-208ENST00000548279 CAMTA2O94983 1202 aa30.5■■■□□ 2.47
CACNB3-208ENST00000548279 TBC1D9BQ66K14 1250 aa30.5■■■□□ 2.47
CACNB3-208ENST00000548279 NBPF10Q6P3W6 841 aaKnown RBP30.5■■■□□ 2.47
CACNB3-208ENST00000548279 BICDL1Q6ZP65 573 aa30.5■■■□□ 2.47
CACNB3-208ENST00000548279 NBPF15Q8N660 670 aa30.5■■■□□ 2.47
CACNB3-208ENST00000548279 PNISRQ8TF01 805 aaKnown RBP30.5■■■□□ 2.47
CACNB3-208ENST00000548279 RRP7AQ9Y3A4 280 aaKnown RBP30.5■■■□□ 2.47
CACNB3-208ENST00000548279 SERPINB2P05120 415 aa30.49■■■□□ 2.47
CACNB3-208ENST00000548279 EIF4A1P60842 406 aaKnown RBP30.49■■■□□ 2.47
CACNB3-208ENST00000548279 ADAMTS8Q9UP79 889 aa30.49■■■□□ 2.47
CACNB3-208ENST00000548279 BCS1LQ9Y276 419 aa30.49■■■□□ 2.47
CACNB3-208ENST00000548279 CHRNA5P30532 468 aa30.48■■■□□ 2.47
CACNB3-208ENST00000548279 WDR43Q15061 677 aaKnown RBP eCLIP30.48■■■□□ 2.47
CACNB3-208ENST00000548279 CARMIL3Q8ND23 1372 aa30.48■■■□□ 2.47
CACNB3-208ENST00000548279 DZIP3Q86Y13 1208 aaKnown RBP30.47■■■□□ 2.47
CACNB3-208ENST00000548279 GIGYF1O75420 1035 aaPredicted RBP30.45■■■□□ 2.47
CACNB3-208ENST00000548279 RUNDC1Q96C34 613 aa30.45■■■□□ 2.47
CACNB3-208ENST00000548279 NEUROD2Q15784 382 aa30.44■■■□□ 2.46
CACNB3-208ENST00000548279 ARFGEF1Q9Y6D6 1849 aa30.44■■■□□ 2.46
CACNB3-208ENST00000548279 NPM2Q86SE8 214 aaKnown RBP30.43■■■□□ 2.46
CACNB3-208ENST00000548279 ANKRD31Q8N7Z5 1873 aa30.43■■■□□ 2.46
CACNB3-208ENST00000548279 DLEC1Q9Y238 1755 aa30.42■■■□□ 2.46
CACNB3-208ENST00000548279 PIM2Q9P1W9 311 aa30.41■■■□□ 2.46
CACNB3-208ENST00000548279 TSPYL4Q9UJ04 414 aa30.41■■■□□ 2.46
CACNB3-208ENST00000548279 TRIM35Q9UPQ4 493 aa30.41■■■□□ 2.46
CACNB3-208ENST00000548279 ADCY9O60503 1353 aa30.41■■■□□ 2.46
CACNB3-208ENST00000548279 ZNF316A6NFI3 1004 aaPredicted RBP30.4■■■□□ 2.46
CACNB3-208ENST00000548279 LMOD3Q0VAK6 560 aa30.39■■■□□ 2.46
CACNB3-208ENST00000548279 CCDC184Q52MB2 194 aa30.39■■■□□ 2.46
CACNB3-208ENST00000548279 ATP10DQ9P241 1426 aa30.39■■■□□ 2.45
CACNB3-208ENST00000548279 PRR5LQ6MZQ0 368 aa30.38■■■□□ 2.45
CACNB3-208ENST00000548279 CCDC24Q8N4L8 307 aa30.38■■■□□ 2.45
CACNB3-208ENST00000548279 COL11A2P13942 1736 aaPredicted RBP30.36■■■□□ 2.45
CACNB3-208ENST00000548279 DALRD3Q5D0E6 543 aaKnown RBP30.35■■■□□ 2.45
CACNB3-208ENST00000548279 SETDB2Q96T68 719 aa30.35■■■□□ 2.45
CACNB3-208ENST00000548279 ARHGAP27Q6ZUM4 889 aa30.34■■■□□ 2.45
CACNB3-208ENST00000548279 CLEC4GQ6UXB4 293 aa30.33■■■□□ 2.45
CACNB3-208ENST00000548279 NGEFQ8N5V2 710 aa30.33■■■□□ 2.45
CACNB3-208ENST00000548279 BABAM1Q9NWV8 329 aa30.33■■■□□ 2.45
CACNB3-208ENST00000548279 HLFQ16534 295 aa30.32■■■□□ 2.44
CACNB3-208ENST00000548279 C2CD5Q86YS7 1000 aa30.32■■■□□ 2.44
CACNB3-208ENST00000548279 MYL6BP14649 208 aa30.31■■■□□ 2.44
CACNB3-208ENST00000548279 TTLL7Q6ZT98 887 aa30.3■■■□□ 2.44
CACNB3-208ENST00000548279 CNBD1Q8NA66 436 aa30.3■■■□□ 2.44
CACNB3-208ENST00000548279 ZNF652Q9Y2D9 606 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms