RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
CHMP1A-204ENST00000547687 ATF5Q9Y2D1 282 aaPredicted RBP21.05■□□□□ 0.96
CHMP1A-204ENST00000547687 VAMP4O75379 141 aa21.04■□□□□ 0.96
CHMP1A-204ENST00000547687 DZIP1LQ8IYY4 767 aaKnown RBP21.04■□□□□ 0.96
CHMP1A-204ENST00000547687 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
CHMP1A-204ENST00000547687 AKT1S1Q96B36 256 aa21.04■□□□□ 0.96
CHMP1A-204ENST00000547687 GOLGB1Q14789 3259 aaKnown RBP21.04■□□□□ 0.96
CHMP1A-204ENST00000547687 MIS18AQ9NYP9 233 aa21.04■□□□□ 0.96
CHMP1A-204ENST00000547687 SCN11AQ9UI33 1791 aa21.03■□□□□ 0.96
CHMP1A-204ENST00000547687 C1orf141Q5JVX7 400 aa21.03■□□□□ 0.96
CHMP1A-204ENST00000547687 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
CHMP1A-204ENST00000547687 SPON1Q9HCB6 807 aa21.02■□□□□ 0.96
CHMP1A-204ENST00000547687 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
CHMP1A-204ENST00000547687 MVPQ14764 893 aaKnown RBP21.02■□□□□ 0.96
CHMP1A-204ENST00000547687 TWISTNBQ3B726 338 aaPredicted RBP21.02■□□□□ 0.96
CHMP1A-204ENST00000547687 ALDH1L2Q3SY69 923 aa21.02■□□□□ 0.96
CHMP1A-204ENST00000547687 DCAF5Q96JK2 942 aa21.02■□□□□ 0.96
CHMP1A-204ENST00000547687 AKAP4Q5JQC9 854 aa21.01■□□□□ 0.95
CHMP1A-204ENST00000547687 NOB1Q9ULX3 412 aaKnown RBP21.01■□□□□ 0.95
CHMP1A-204ENST00000547687 ZNF428Q96B54 188 aa21■□□□□ 0.95
CHMP1A-204ENST00000547687 QSER1Q2KHR3 1735 aa21■□□□□ 0.95
CHMP1A-204ENST00000547687 PLEKHG2Q9H7P9 1386 aa21■□□□□ 0.95
CHMP1A-204ENST00000547687 ANP32AP39687 249 aaKnown RBP21■□□□□ 0.95
CHMP1A-204ENST00000547687 KRT24Q2M2I5 525 aa21■□□□□ 0.95
CHMP1A-204ENST00000547687 ATF7IPQ6VMQ6 1270 aa21■□□□□ 0.95
CHMP1A-204ENST00000547687 TSPYL4Q9UJ04 414 aa21■□□□□ 0.95
CHMP1A-204ENST00000547687 PNPLA7Q6ZV29 1317 aa20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 TRIM27P14373 513 aa20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 SMIM5Q71RC9 77 aa20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 ATG3Q9NT62 314 aa20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 CEMIPQ8WUJ3 1361 aa20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 IPO8O15397 1037 aaKnown RBP20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 CABP4P57796 275 aa20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
CHMP1A-204ENST00000547687 C4BP0C0L5 1744 aa20.98■□□□□ 0.95
CHMP1A-204ENST00000547687 PPP1R1BQ9UD71 204 aaPredicted RBP20.98■□□□□ 0.95
CHMP1A-204ENST00000547687 PCDHB15Q9Y5E8 787 aa20.98■□□□□ 0.95
CHMP1A-204ENST00000547687 KIF16BQ96L93 1317 aa20.98■□□□□ 0.95
CHMP1A-204ENST00000547687 LOC102724428A0A0B4J2F2 783 aa20.97■□□□□ 0.95
CHMP1A-204ENST00000547687 ERVV-2B6SEH9 535 aa20.97■□□□□ 0.95
CHMP1A-204ENST00000547687 SIK1P57059 783 aa20.97■□□□□ 0.95
CHMP1A-204ENST00000547687 NFATC2IPQ8NCF5 419 aa20.97■□□□□ 0.95
CHMP1A-204ENST00000547687 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
CHMP1A-204ENST00000547687 ANP32EQ9BTT0 268 aa20.97■□□□□ 0.95
CHMP1A-204ENST00000547687 AMIGO3Q86WK7 504 aa20.96■□□□□ 0.95
CHMP1A-204ENST00000547687 PTGER2P43116 358 aa20.95■□□□□ 0.94
CHMP1A-204ENST00000547687 RGS3P49796 1198 aa20.95■□□□□ 0.94
CHMP1A-204ENST00000547687 BRPF1P55201 1214 aaPredicted RBP20.95■□□□□ 0.94
CHMP1A-204ENST00000547687 RBM42Q9BTD8 480 aaKnown RBP20.95■□□□□ 0.94
CHMP1A-204ENST00000547687 UBR3Q6ZT12 1888 aa20.95■□□□□ 0.94
CHMP1A-204ENST00000547687 ITPK1Q13572 414 aa20.95■□□□□ 0.94
CHMP1A-204ENST00000547687 LINC00116Q8NCU8 138 aa20.95■□□□□ 0.94
CHMP1A-204ENST00000547687 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
CHMP1A-204ENST00000547687 MRPL50Q8N5N7 158 aaKnown RBP20.94■□□□□ 0.94
CHMP1A-204ENST00000547687 SLC4A9Q96Q91 983 aa20.94■□□□□ 0.94
CHMP1A-204ENST00000547687 MTFR1LQ9H019 292 aa20.94■□□□□ 0.94
CHMP1A-204ENST00000547687 RWDD1Q9H446 243 aaPredicted RBP20.94■□□□□ 0.94
CHMP1A-204ENST00000547687 DDX19BQ9UMR2 479 aa20.94■□□□□ 0.94
CHMP1A-204ENST00000547687 RNMTO43148 476 aaKnown RBP20.93■□□□□ 0.94
CHMP1A-204ENST00000547687 COL23A1Q86Y22 540 aaPredicted RBP20.93■□□□□ 0.94
CHMP1A-204ENST00000547687 ITPRIPQ8IWB1 547 aa20.93■□□□□ 0.94
CHMP1A-204ENST00000547687 PTCD1O75127 700 aaKnown RBP20.92■□□□□ 0.94
CHMP1A-204ENST00000547687 ERICH6Q7L0X2 663 aa20.92■□□□□ 0.94
CHMP1A-204ENST00000547687 IPO9Q96P70 1041 aaKnown RBP20.92■□□□□ 0.94
CHMP1A-204ENST00000547687 BABAM1Q9NWV8 329 aa20.92■□□□□ 0.94
CHMP1A-204ENST00000547687 PHF14O94880 888 aa20.92■□□□□ 0.94
CHMP1A-204ENST00000547687 TEFQ10587 303 aa20.91■□□□□ 0.94
CHMP1A-204ENST00000547687 FAM161AQ3B820 660 aa20.91■□□□□ 0.94
CHMP1A-204ENST00000547687 TMEM57Q8N5G2 664 aa20.91■□□□□ 0.94
CHMP1A-204ENST00000547687 MSL1Q68DK7 614 aa20.9■□□□□ 0.94
CHMP1A-204ENST00000547687 NPM2Q86SE8 214 aaKnown RBP20.9■□□□□ 0.94
CHMP1A-204ENST00000547687 AK7Q96M32 723 aa20.9■□□□□ 0.94
CHMP1A-204ENST00000547687 SGIP1Q9BQI5 828 aa20.9■□□□□ 0.94
CHMP1A-204ENST00000547687 MYH14Q7Z406 1995 aaKnown RBP20.9■□□□□ 0.94
CHMP1A-204ENST00000547687 ADAMTS7Q9UKP4 1686 aa20.89■□□□□ 0.93
CHMP1A-204ENST00000547687 SLC39A6Q13433 755 aa20.89■□□□□ 0.93
CHMP1A-204ENST00000547687 SLC52A2Q9HAB3 445 aa20.89■□□□□ 0.93
CHMP1A-204ENST00000547687 COL5A3P25940 1745 aaPredicted RBP20.89■□□□□ 0.93
CHMP1A-204ENST00000547687 ARHGAP45Q92619 1136 aa20.88■□□□□ 0.93
CHMP1A-204ENST00000547687 KDM3BQ7LBC6 1761 aa20.87■□□□□ 0.93
CHMP1A-204ENST00000547687 GNPATO15228 680 aa20.87■□□□□ 0.93
CHMP1A-204ENST00000547687 C8orf34Q49A92 452 aa20.87■□□□□ 0.93
CHMP1A-204ENST00000547687 TJP1Q07157 1748 aa20.86■□□□□ 0.93
CHMP1A-204ENST00000547687 MRC1P22897 1456 aa20.86■□□□□ 0.93
CHMP1A-204ENST00000547687 BTBD11A6QL63 1104 aa20.86■□□□□ 0.93
CHMP1A-204ENST00000547687 NOP58Q9Y2X3 529 aaKnown RBP20.86■□□□□ 0.93
CHMP1A-204ENST00000547687 COL24A1Q17RW2 1714 aa20.86■□□□□ 0.93
CHMP1A-204ENST00000547687 SIPA1L3O60292 1781 aaPredicted RBP20.85■□□□□ 0.93
CHMP1A-204ENST00000547687 ZNF831Q5JPB2 1677 aa20.85■□□□□ 0.93
CHMP1A-204ENST00000547687 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.85■□□□□ 0.93
CHMP1A-204ENST00000547687 KCNQ3O43525 872 aa20.85■□□□□ 0.93
CHMP1A-204ENST00000547687 KLHL34Q8N239 644 aa20.85■□□□□ 0.93
CHMP1A-204ENST00000547687 FHDC1Q9C0D6 1143 aaPredicted RBP20.85■□□□□ 0.93
CHMP1A-204ENST00000547687 ZBTB40Q9NUA8 1239 aa20.85■□□□□ 0.93
CHMP1A-204ENST00000547687 ARXQ96QS3 562 aa20.84■□□□□ 0.93
CHMP1A-204ENST00000547687 PDZRN3Q9UPQ7 1066 aa20.84■□□□□ 0.93
CHMP1A-204ENST00000547687 EIF4A1P60842 406 aaKnown RBP20.83■□□□□ 0.93
CHMP1A-204ENST00000547687 HDAC1Q13547 482 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms