RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 PPP1R9BQ96SB3 815 aa21.13■□□□□ 0.97
LETMD1-210ENST00000547555 SBF2Q86WG5 1849 aa21.13■□□□□ 0.97
LETMD1-210ENST00000547555 NFE2L2Q16236 605 aa21.12■□□□□ 0.97
LETMD1-210ENST00000547555 KRT27Q7Z3Y8 459 aa21.12■□□□□ 0.97
LETMD1-210ENST00000547555 IFNL2Q8IZJ0 200 aa21.12■□□□□ 0.97
LETMD1-210ENST00000547555 ZBTB40Q9NUA8 1239 aa21.12■□□□□ 0.97
LETMD1-210ENST00000547555 DOT1LQ8TEK3 1739 aa21.12■□□□□ 0.97
LETMD1-210ENST00000547555 MAP3K5Q99683 1374 aa21.12■□□□□ 0.97
LETMD1-210ENST00000547555 NKX1-1Q15270 411 aaPredicted RBP21.12■□□□□ 0.97
LETMD1-210ENST00000547555 AKAP4Q5JQC9 854 aa21.12■□□□□ 0.97
LETMD1-210ENST00000547555 DDX54Q8TDD1 881 aaKnown RBP21.12■□□□□ 0.97
LETMD1-210ENST00000547555 TMPOP42166 694 aaKnown RBP21.11■□□□□ 0.97
LETMD1-210ENST00000547555 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
LETMD1-210ENST00000547555 C1orf141Q5JVX7 400 aa21.11■□□□□ 0.97
LETMD1-210ENST00000547555 ANP32BQ92688 251 aaKnown RBP21.11■□□□□ 0.97
LETMD1-210ENST00000547555 ARHGAP45Q92619 1136 aa21.1■□□□□ 0.97
LETMD1-210ENST00000547555 KDM6AO15550 1401 aaPredicted RBP21.1■□□□□ 0.97
LETMD1-210ENST00000547555 TRIM27P14373 513 aa21.09■□□□□ 0.97
LETMD1-210ENST00000547555 SMC4Q9NTJ3 1288 aa21.09■□□□□ 0.97
LETMD1-210ENST00000547555 ITGB4P16144 1822 aa21.09■□□□□ 0.97
LETMD1-210ENST00000547555 HSP90AB1P08238 724 aaKnown RBP21.09■□□□□ 0.97
LETMD1-210ENST00000547555 NHSQ6T4R5 1651 aa21.08■□□□□ 0.96
LETMD1-210ENST00000547555 GNAT3A8MTJ3 354 aa21.08■□□□□ 0.96
LETMD1-210ENST00000547555 TNPO1Q92973 898 aaKnown RBP21.08■□□□□ 0.96
LETMD1-210ENST00000547555 MRC1P22897 1456 aa21.08■□□□□ 0.96
LETMD1-210ENST00000547555 MAP7D2Q96T17 732 aa21.07■□□□□ 0.96
LETMD1-210ENST00000547555 PANK2Q9BZ23 570 aa21.07■□□□□ 0.96
LETMD1-210ENST00000547555 SIPA1L3O60292 1781 aaPredicted RBP21.07■□□□□ 0.96
LETMD1-210ENST00000547555 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
LETMD1-210ENST00000547555 KLHL40Q2TBA0 621 aa21.06■□□□□ 0.96
LETMD1-210ENST00000547555 DCAF5Q96JK2 942 aa21.06■□□□□ 0.96
LETMD1-210ENST00000547555 PDCL3Q9H2J4 239 aa21.06■□□□□ 0.96
LETMD1-210ENST00000547555 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
LETMD1-210ENST00000547555 KAT6BQ8WYB5 2073 aa21.05■□□□□ 0.96
LETMD1-210ENST00000547555 RIPK4P57078 832 aa21.05■□□□□ 0.96
LETMD1-210ENST00000547555 FAM182BQ5T319 152 aa21.05■□□□□ 0.96
LETMD1-210ENST00000547555 CHD1LQ86WJ1 897 aa21.05■□□□□ 0.96
LETMD1-210ENST00000547555 RRP7AQ9Y3A4 280 aaKnown RBP21.05■□□□□ 0.96
LETMD1-210ENST00000547555 EP400Q96L91 3159 aa21.05■□□□□ 0.96
LETMD1-210ENST00000547555 K7ELQ4 463 aaPredicted RBP21.04■□□□□ 0.96
LETMD1-210ENST00000547555 CALD1Q05682 793 aaKnown RBP21.04■□□□□ 0.96
LETMD1-210ENST00000547555 FAM196AQ6ZSG2 479 aa21.04■□□□□ 0.96
LETMD1-210ENST00000547555 RNMTO43148 476 aaKnown RBP21.03■□□□□ 0.96
LETMD1-210ENST00000547555 LMOD3Q0VAK6 560 aa21.03■□□□□ 0.96
LETMD1-210ENST00000547555 NEUROD2Q15784 382 aa21.03■□□□□ 0.96
LETMD1-210ENST00000547555 ZSCAN30Q86W11 494 aa21.03■□□□□ 0.96
LETMD1-210ENST00000547555 SSH1Q8WYL5 1049 aa21.03■□□□□ 0.96
LETMD1-210ENST00000547555 NUCB2P80303 420 aa21.02■□□□□ 0.96
LETMD1-210ENST00000547555 MPRIPQ6WCQ1 1025 aa21.02■□□□□ 0.96
LETMD1-210ENST00000547555 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.02■□□□□ 0.96
LETMD1-210ENST00000547555 ITPRIPQ8IWB1 547 aa21.02■□□□□ 0.96
LETMD1-210ENST00000547555 GZF1Q9H116 711 aaPredicted RBP21.02■□□□□ 0.96
LETMD1-210ENST00000547555 TRIM35Q9UPQ4 493 aa21.02■□□□□ 0.96
LETMD1-210ENST00000547555 ZNF445P59923 1031 aa21.02■□□□□ 0.95
LETMD1-210ENST00000547555 IL17REQ8NFR9 667 aa21.02■□□□□ 0.95
LETMD1-210ENST00000547555 MCM5P33992 734 aa21.01■□□□□ 0.95
LETMD1-210ENST00000547555 EXOSC9Q06265 439 aaKnown RBP21.01■□□□□ 0.95
LETMD1-210ENST00000547555 RTF1Q92541 710 aaKnown RBP21.01■□□□□ 0.95
LETMD1-210ENST00000547555 LGR6Q9HBX8 967 aa21.01■□□□□ 0.95
LETMD1-210ENST00000547555 TNS1Q9HBL0 1735 aaKnown RBP21■□□□□ 0.95
LETMD1-210ENST00000547555 ERVV-2B6SEH9 535 aa21■□□□□ 0.95
LETMD1-210ENST00000547555 MTERF4Q7Z6M4 381 aaKnown RBP21■□□□□ 0.95
LETMD1-210ENST00000547555 TNNQ9UQP3 1299 aa21■□□□□ 0.95
LETMD1-210ENST00000547555 BTAF1O14981 1849 aa21■□□□□ 0.95
LETMD1-210ENST00000547555 MCM10Q7L590 875 aa20.99■□□□□ 0.95
LETMD1-210ENST00000547555 CWC22Q9HCG8 908 aaKnown RBP20.99■□□□□ 0.95
LETMD1-210ENST00000547555 PAPPAQ13219 1627 aa20.99■□□□□ 0.95
LETMD1-210ENST00000547555 OFD1O75665 1012 aa20.99■□□□□ 0.95
LETMD1-210ENST00000547555 DCTN1Q14203 1278 aa20.99■□□□□ 0.95
LETMD1-210ENST00000547555 RABEP1Q15276 862 aa20.98■□□□□ 0.95
LETMD1-210ENST00000547555 BCL2L13Q9BXK5 485 aa20.98■□□□□ 0.95
LETMD1-210ENST00000547555 KLHL34Q8N239 644 aa20.97■□□□□ 0.95
LETMD1-210ENST00000547555 PKNOX2Q96KN3 472 aa20.97■□□□□ 0.95
LETMD1-210ENST00000547555 SLC52A2Q9HAB3 445 aa20.97■□□□□ 0.95
LETMD1-210ENST00000547555 NOB1Q9ULX3 412 aaKnown RBP20.97■□□□□ 0.95
LETMD1-210ENST00000547555 TMEM57Q8N5G2 664 aa20.96■□□□□ 0.95
LETMD1-210ENST00000547555 ACSBG1Q96GR2 724 aa20.96■□□□□ 0.95
LETMD1-210ENST00000547555 KIF2CQ99661 725 aa20.96■□□□□ 0.95
LETMD1-210ENST00000547555 NASPP49321 788 aaPredicted RBP20.96■□□□□ 0.95
LETMD1-210ENST00000547555 PRIM1P49642 420 aaKnown RBP20.96■□□□□ 0.95
LETMD1-210ENST00000547555 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
LETMD1-210ENST00000547555 KDM3BQ7LBC6 1761 aa20.95■□□□□ 0.94
LETMD1-210ENST00000547555 KCNQ2O43526 872 aa20.95■□□□□ 0.94
LETMD1-210ENST00000547555 ILDR2Q71H61 639 aa20.95■□□□□ 0.94
LETMD1-210ENST00000547555 CDC45O75419 566 aa20.94■□□□□ 0.94
LETMD1-210ENST00000547555 UBR2Q8IWV8 1755 aa20.94■□□□□ 0.94
LETMD1-210ENST00000547555 MSNP26038 577 aaKnown RBP20.93■□□□□ 0.94
LETMD1-210ENST00000547555 CABP4P57796 275 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 TEFQ10587 303 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 BCL11BQ9C0K0 894 aaPredicted RBP20.93■□□□□ 0.94
LETMD1-210ENST00000547555 TMOD3Q9NYL9 352 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 ZNF500O60304 480 aaPredicted RBP20.93■□□□□ 0.94
LETMD1-210ENST00000547555 CSPP1Q1MSJ5 1256 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 PTF1AQ7RTS3 328 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 NFATC2IPQ8NCF5 419 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 SPRYD3Q8NCJ5 442 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 PIGBQ92521 554 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 RGPD3A6NKT7 1758 aaPredicted RBP20.93■□□□□ 0.94
LETMD1-210ENST00000547555 RGPD4Q7Z3J3 1758 aa20.93■□□□□ 0.94
LETMD1-210ENST00000547555 ERBB4Q15303 1308 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms