RNA–Protein interactions for RNA: ENST00000547441.1

PRKD1-206, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-206ENST00000547441 CNTNAP4Q9C0A0 1308 aa13.21□□□□□ -0.29
PRKD1-206ENST00000547441 PLCB2Q00722 1185 aa13.21□□□□□ -0.29
PRKD1-206ENST00000547441 FSTL1Q12841 308 aa13.21□□□□□ -0.29
PRKD1-206ENST00000547441 PARP3Q9Y6F1 533 aa13.21□□□□□ -0.29
PRKD1-206ENST00000547441 MYH14Q7Z406 1995 aaKnown RBP13.2□□□□□ -0.3
PRKD1-206ENST00000547441 KCPQ6ZWJ8 1503 aa13.2□□□□□ -0.3
PRKD1-206ENST00000547441 KCNA3P22001 575 aa13.2□□□□□ -0.3
PRKD1-206ENST00000547441 RFC4P35249 363 aa13.2□□□□□ -0.3
PRKD1-206ENST00000547441 TNNT2P45379 298 aaPredicted RBP13.2□□□□□ -0.3
PRKD1-206ENST00000547441 HTRA3P83110 453 aa13.2□□□□□ -0.3
PRKD1-206ENST00000547441 COL13A1Q5TAT6 717 aaPredicted RBP13.2□□□□□ -0.3
PRKD1-206ENST00000547441 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
PRKD1-206ENST00000547441 TNRC6CQ9HCJ0 1690 aaKnown RBP13.2□□□□□ -0.3
PRKD1-206ENST00000547441 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
PRKD1-206ENST00000547441 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
PRKD1-206ENST00000547441 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
PRKD1-206ENST00000547441 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
PRKD1-206ENST00000547441 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
PRKD1-206ENST00000547441 SBF1O95248 1867 aa13.17□□□□□ -0.3
PRKD1-206ENST00000547441 EIF4A2Q14240 407 aaKnown RBP13.17□□□□□ -0.3
PRKD1-206ENST00000547441 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
PRKD1-206ENST00000547441 RNF181Q9P0P0 153 aa13.17□□□□□ -0.3
PRKD1-206ENST00000547441 KDM6AO15550 1401 aaPredicted RBP13.16□□□□□ -0.3
PRKD1-206ENST00000547441 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
PRKD1-206ENST00000547441 ZEB1P37275 1124 aaPredicted RBP13.16□□□□□ -0.3
PRKD1-206ENST00000547441 DDR1Q08345 913 aa13.15□□□□□ -0.3
PRKD1-206ENST00000547441 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
PRKD1-206ENST00000547441 USP42Q9H9J4 1324 aaKnown RBP13.14□□□□□ -0.31
PRKD1-206ENST00000547441 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
PRKD1-206ENST00000547441 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
PRKD1-206ENST00000547441 TNS4Q8IZW8 715 aa13.14□□□□□ -0.31
PRKD1-206ENST00000547441 SMC1BQ8NDV3 1235 aa13.14□□□□□ -0.31
PRKD1-206ENST00000547441 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
PRKD1-206ENST00000547441 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
PRKD1-206ENST00000547441 TJP1Q07157 1748 aa13.13□□□□□ -0.31
PRKD1-206ENST00000547441 MTHFSP49914 203 aa13.13□□□□□ -0.31
PRKD1-206ENST00000547441 CABP4P57796 275 aa13.13□□□□□ -0.31
PRKD1-206ENST00000547441 ADAMTS7Q9UKP4 1686 aa13.12□□□□□ -0.31
PRKD1-206ENST00000547441 PTCD1O75127 700 aaKnown RBP13.12□□□□□ -0.31
PRKD1-206ENST00000547441 CHRNA5P30532 468 aa13.12□□□□□ -0.31
PRKD1-206ENST00000547441 PRELPP51888 382 aa13.12□□□□□ -0.31
PRKD1-206ENST00000547441 PLEKHO1Q53GL0 409 aaPredicted RBP13.12□□□□□ -0.31
PRKD1-206ENST00000547441 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
PRKD1-206ENST00000547441 POLRMTO00411 1230 aaKnown RBP13.11□□□□□ -0.31
PRKD1-206ENST00000547441 IL13P35225 146 aa13.11□□□□□ -0.31
PRKD1-206ENST00000547441 AMOTQ4VCS5 1084 aa13.11□□□□□ -0.31
PRKD1-206ENST00000547441 CIZ1Q9ULV3 898 aaPredicted RBP13.11□□□□□ -0.31
PRKD1-206ENST00000547441 RGL2O15211 777 aa13.1□□□□□ -0.31
PRKD1-206ENST00000547441 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
PRKD1-206ENST00000547441 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
PRKD1-206ENST00000547441 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
PRKD1-206ENST00000547441 TM4SF1P30408 202 aa13.09□□□□□ -0.31
PRKD1-206ENST00000547441 RASSF7Q02833 373 aa13.09□□□□□ -0.31
PRKD1-206ENST00000547441 INTS5Q6P9B9 1019 aaKnown RBP13.09□□□□□ -0.31
PRKD1-206ENST00000547441 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
PRKD1-206ENST00000547441 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
PRKD1-206ENST00000547441 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
PRKD1-206ENST00000547441 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
PRKD1-206ENST00000547441 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.32
PRKD1-206ENST00000547441 GLTPD2A6NH11 291 aa13.08□□□□□ -0.32
PRKD1-206ENST00000547441 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.32
PRKD1-206ENST00000547441 LMNB1P20700 586 aa13.08□□□□□ -0.32
PRKD1-206ENST00000547441 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
PRKD1-206ENST00000547441 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
PRKD1-206ENST00000547441 ZPR1O75312 459 aa13.07□□□□□ -0.32
PRKD1-206ENST00000547441 HSPA1AP0DMV8 641 aaKnown RBP13.07□□□□□ -0.32
PRKD1-206ENST00000547441 HSPA1BP0DMV9 641 aaKnown RBP13.07□□□□□ -0.32
PRKD1-206ENST00000547441 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
PRKD1-206ENST00000547441 CFAP53Q96M91 514 aa13.07□□□□□ -0.32
PRKD1-206ENST00000547441 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
PRKD1-206ENST00000547441 USPL1Q5W0Q7 1092 aa13.06□□□□□ -0.32
PRKD1-206ENST00000547441 AEBP1Q8IUX7 1158 aa13.06□□□□□ -0.32
PRKD1-206ENST00000547441 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
PRKD1-206ENST00000547441 NFIXQ14938 502 aa13.05□□□□□ -0.32
PRKD1-206ENST00000547441 PRR29P0C7W0 189 aa13.04□□□□□ -0.32
PRKD1-206ENST00000547441 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
PRKD1-206ENST00000547441 DNAJC10Q8IXB1 793 aa13.04□□□□□ -0.32
PRKD1-206ENST00000547441 TTLL6Q8N841 843 aa13.04□□□□□ -0.32
PRKD1-206ENST00000547441 COL15A1P39059 1388 aa13.04□□□□□ -0.32
PRKD1-206ENST00000547441 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
PRKD1-206ENST00000547441 MRC1P22897 1456 aa13.04□□□□□ -0.32
PRKD1-206ENST00000547441 NFKBIEO00221 500 aa13.03□□□□□ -0.32
PRKD1-206ENST00000547441 CYP19A1P11511 503 aaPredicted RBP13.03□□□□□ -0.32
PRKD1-206ENST00000547441 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
PRKD1-206ENST00000547441 NARFQ9UHQ1 456 aa13.03□□□□□ -0.32
PRKD1-206ENST00000547441 SERPINB2P05120 415 aa13.02□□□□□ -0.33
PRKD1-206ENST00000547441 CNGB1Q14028 1251 aaPredicted RBP13.02□□□□□ -0.33
PRKD1-206ENST00000547441 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
PRKD1-206ENST00000547441 NUDCQ9Y266 331 aa13.02□□□□□ -0.33
PRKD1-206ENST00000547441 CARMIL3Q8ND23 1372 aa13.02□□□□□ -0.33
PRKD1-206ENST00000547441 POTECB2RU33 542 aa13.01□□□□□ -0.33
PRKD1-206ENST00000547441 NUBP1P53384 320 aa13.01□□□□□ -0.33
PRKD1-206ENST00000547441 RALBP1Q15311 655 aa13.01□□□□□ -0.33
PRKD1-206ENST00000547441 AKAP4Q5JQC9 854 aa13.01□□□□□ -0.33
PRKD1-206ENST00000547441 C2CD5Q86YS7 1000 aa13.01□□□□□ -0.33
PRKD1-206ENST00000547441 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
PRKD1-206ENST00000547441 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
PRKD1-206ENST00000547441 ZBTB1Q9Y2K1 713 aa13.01□□□□□ -0.33
PRKD1-206ENST00000547441 DICER1Q9UPY3 1922 aaKnown RBP13.01□□□□□ -0.33
PRKD1-206ENST00000547441 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms