RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ARFGEF1Q9Y6D6 1849 aa15.92■□□□□ 0.14
HDAC7-226ENST00000547259 KIF3CO14782 793 aa15.92■□□□□ 0.14
HDAC7-226ENST00000547259 NEFMP07197 916 aa15.92■□□□□ 0.14
HDAC7-226ENST00000547259 DPEP1P16444 411 aa15.92■□□□□ 0.14
HDAC7-226ENST00000547259 CCDC146Q8IYE0 955 aa15.92■□□□□ 0.14
HDAC7-226ENST00000547259 BRCA1P38398 1863 aaKnown RBP15.92■□□□□ 0.14
HDAC7-226ENST00000547259 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
HDAC7-226ENST00000547259 ZPR1O75312 459 aa15.91■□□□□ 0.14
HDAC7-226ENST00000547259 APLP1P51693 650 aa15.91■□□□□ 0.14
HDAC7-226ENST00000547259 KIAA1551Q9HCM1 1747 aa15.91■□□□□ 0.14
HDAC7-226ENST00000547259 DALRD3Q5D0E6 543 aaKnown RBP15.9■□□□□ 0.14
HDAC7-226ENST00000547259 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
HDAC7-226ENST00000547259 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
HDAC7-226ENST00000547259 C16orf71Q8IYS4 520 aaPredicted RBP15.89■□□□□ 0.13
HDAC7-226ENST00000547259 SLC52A2Q9HAB3 445 aa15.89■□□□□ 0.13
HDAC7-226ENST00000547259 PLEKHF1Q96S99 279 aa15.88■□□□□ 0.13
HDAC7-226ENST00000547259 KDM2BQ8NHM5 1336 aa15.88■□□□□ 0.13
HDAC7-226ENST00000547259 FKBP8Q14318 412 aa15.87■□□□□ 0.13
HDAC7-226ENST00000547259 KCNA3P22001 575 aa15.86■□□□□ 0.13
HDAC7-226ENST00000547259 INTS5Q6P9B9 1019 aaKnown RBP15.86■□□□□ 0.13
HDAC7-226ENST00000547259 VSIG10Q8N0Z9 540 aa15.86■□□□□ 0.13
HDAC7-226ENST00000547259 PHACTR3Q96KR7 559 aa15.86■□□□□ 0.13
HDAC7-226ENST00000547259 TJP1Q07157 1748 aa15.85■□□□□ 0.13
HDAC7-226ENST00000547259 TM4SF1P30408 202 aa15.85■□□□□ 0.13
HDAC7-226ENST00000547259 C9orf131Q5VYM1 1079 aa15.85■□□□□ 0.13
HDAC7-226ENST00000547259 GAS2L2Q8NHY3 880 aa15.85■□□□□ 0.13
HDAC7-226ENST00000547259 RBM46Q8TBY0 533 aaKnown RBP15.85■□□□□ 0.13
HDAC7-226ENST00000547259 SRP68Q9UHB9 627 aaKnown RBP15.85■□□□□ 0.13
HDAC7-226ENST00000547259 RNMTO43148 476 aaKnown RBP15.84■□□□□ 0.13
HDAC7-226ENST00000547259 NARFQ9UHQ1 456 aa15.84■□□□□ 0.13
HDAC7-226ENST00000547259 ZC3H4Q9UPT8 1303 aaKnown RBP15.84■□□□□ 0.13
HDAC7-226ENST00000547259 POLRMTO00411 1230 aaKnown RBP15.83■□□□□ 0.12
HDAC7-226ENST00000547259 APAF1O14727 1248 aa15.83■□□□□ 0.12
HDAC7-226ENST00000547259 STARD3NLO95772 234 aa15.83■□□□□ 0.12
HDAC7-226ENST00000547259 CYP19A1P11511 503 aaPredicted RBP15.83■□□□□ 0.12
HDAC7-226ENST00000547259 DDR1Q08345 913 aa15.83■□□□□ 0.12
HDAC7-226ENST00000547259 FSTL1Q12841 308 aa15.83■□□□□ 0.12
HDAC7-226ENST00000547259 NFE2L2Q16236 605 aa15.83■□□□□ 0.12
HDAC7-226ENST00000547259 MTHFSDQ2M296 383 aaKnown RBP15.83■□□□□ 0.12
HDAC7-226ENST00000547259 USPL1Q5W0Q7 1092 aa15.83■□□□□ 0.12
HDAC7-226ENST00000547259 DNAJC10Q8IXB1 793 aa15.83■□□□□ 0.12
HDAC7-226ENST00000547259 TEX13AQ9BXU3 409 aaPredicted RBP15.83■□□□□ 0.12
HDAC7-226ENST00000547259 SOS1Q07889 1333 aaPredicted RBP15.83■□□□□ 0.12
HDAC7-226ENST00000547259 SBF1O95248 1867 aa15.82■□□□□ 0.12
HDAC7-226ENST00000547259 A0A087WZG4 1122 aa15.82■□□□□ 0.12
HDAC7-226ENST00000547259 TTC5Q8N0Z6 440 aa15.82■□□□□ 0.12
HDAC7-226ENST00000547259 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
HDAC7-226ENST00000547259 RNF181Q9P0P0 153 aa15.82■□□□□ 0.12
HDAC7-226ENST00000547259 PDZRN3Q9UPQ7 1066 aa15.82■□□□□ 0.12
HDAC7-226ENST00000547259 RRP7AQ9Y3A4 280 aaKnown RBP15.82■□□□□ 0.12
HDAC7-226ENST00000547259 MRC1P22897 1456 aa15.82■□□□□ 0.12
HDAC7-226ENST00000547259 NEUROD2Q15784 382 aa15.81■□□□□ 0.12
HDAC7-226ENST00000547259 NMRK2Q9NPI5 230 aa15.81■□□□□ 0.12
HDAC7-226ENST00000547259 ADAMTS7Q9UKP4 1686 aa15.81■□□□□ 0.12
HDAC7-226ENST00000547259 COL15A1P39059 1388 aa15.8■□□□□ 0.12
HDAC7-226ENST00000547259 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
HDAC7-226ENST00000547259 HNRNPUQ00839 825 aaKnown RBP eCLIP15.8■□□□□ 0.12
HDAC7-226ENST00000547259 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
HDAC7-226ENST00000547259 CHRNA5P30532 468 aa15.79■□□□□ 0.12
HDAC7-226ENST00000547259 RIPK4P57078 832 aa15.79■□□□□ 0.12
HDAC7-226ENST00000547259 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
HDAC7-226ENST00000547259 YTHDC1Q96MU7 727 aaKnown RBP15.79■□□□□ 0.12
HDAC7-226ENST00000547259 AFDNP55196 1824 aaKnown RBP15.79■□□□□ 0.12
HDAC7-226ENST00000547259 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
HDAC7-226ENST00000547259 H0YIN7 160 aa15.78■□□□□ 0.12
HDAC7-226ENST00000547259 SERPINB2P05120 415 aa15.78■□□□□ 0.12
HDAC7-226ENST00000547259 LMOD3Q0VAK6 560 aa15.78■□□□□ 0.12
HDAC7-226ENST00000547259 TEFQ10587 303 aa15.78■□□□□ 0.12
HDAC7-226ENST00000547259 NFIXQ14938 502 aa15.78■□□□□ 0.12
HDAC7-226ENST00000547259 TTLL6Q8N841 843 aa15.78■□□□□ 0.12
HDAC7-226ENST00000547259 SALL2Q9Y467 1007 aaPredicted RBP15.78■□□□□ 0.12
HDAC7-226ENST00000547259 TNRC6CQ9HCJ0 1690 aaKnown RBP15.78■□□□□ 0.12
HDAC7-226ENST00000547259 SIPA1L3O60292 1781 aaPredicted RBP15.77■□□□□ 0.12
HDAC7-226ENST00000547259 LMNB1P20700 586 aa15.77■□□□□ 0.12
HDAC7-226ENST00000547259 DNAJC5GQ8N7S2 189 aa15.77■□□□□ 0.12
HDAC7-226ENST00000547259 RTF1Q92541 710 aaKnown RBP15.77■□□□□ 0.12
HDAC7-226ENST00000547259 ZBTB1Q9Y2K1 713 aa15.77■□□□□ 0.12
HDAC7-226ENST00000547259 NRXN2Q9P2S2 1712 aa15.77■□□□□ 0.11
HDAC7-226ENST00000547259 SMC1BQ8NDV3 1235 aa15.76■□□□□ 0.11
HDAC7-226ENST00000547259 KCPQ6ZWJ8 1503 aa15.76■□□□□ 0.11
HDAC7-226ENST00000547259 UBR2Q8IWV8 1755 aa15.76■□□□□ 0.11
HDAC7-226ENST00000547259 DLEC1Q9Y238 1755 aa15.75■□□□□ 0.11
HDAC7-226ENST00000547259 WDR90Q96KV7 1748 aa15.75■□□□□ 0.11
HDAC7-226ENST00000547259 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
HDAC7-226ENST00000547259 PDE6BP35913 854 aa15.75■□□□□ 0.11
HDAC7-226ENST00000547259 EIF5P55010 431 aaKnown RBP15.75■□□□□ 0.11
HDAC7-226ENST00000547259 NGEFQ8N5V2 710 aa15.75■□□□□ 0.11
HDAC7-226ENST00000547259 RRAGCQ9HB90 399 aa15.75■□□□□ 0.11
HDAC7-226ENST00000547259 CCDC88AQ3V6T2 1871 aa15.74■□□□□ 0.11
HDAC7-226ENST00000547259 HTATSF1O43719 755 aaKnown RBP15.74■□□□□ 0.11
HDAC7-226ENST00000547259 VEGFAP15692 232 aaPredicted RBP15.74■□□□□ 0.11
HDAC7-226ENST00000547259 ZNF790Q6PG37 636 aa15.74■□□□□ 0.11
HDAC7-226ENST00000547259 C2CD5Q86YS7 1000 aa15.74■□□□□ 0.11
HDAC7-226ENST00000547259 GLTPD2A6NH11 291 aa15.73■□□□□ 0.11
HDAC7-226ENST00000547259 IL6STP40189 918 aaPredicted RBP15.73■□□□□ 0.11
HDAC7-226ENST00000547259 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
HDAC7-226ENST00000547259 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
HDAC7-226ENST00000547259 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
HDAC7-226ENST00000547259 DPY19L2Q6NUT2 758 aa15.73■□□□□ 0.11
HDAC7-226ENST00000547259 MCM10Q7L590 875 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms