RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 BRPF3Q9ULD4 1205 aa15.62■□□□□ 0.09
SCAF11-209ENST00000547018 NPHP3Q7Z494 1330 aa15.61■□□□□ 0.09
SCAF11-209ENST00000547018 XRN1Q8IZH2 1706 aaKnown RBP15.61■□□□□ 0.09
SCAF11-209ENST00000547018 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
SCAF11-209ENST00000547018 IL27Q8NEV9 243 aa15.61■□□□□ 0.09
SCAF11-209ENST00000547018 SPG7Q9UQ90 795 aa15.61■□□□□ 0.09
SCAF11-209ENST00000547018 CCDC8Q9H0W5 538 aaPredicted RBP15.6■□□□□ 0.09
SCAF11-209ENST00000547018 CYP27B1O15528 508 aa15.6■□□□□ 0.09
SCAF11-209ENST00000547018 NCLP19338 710 aaKnown RBP15.6■□□□□ 0.09
SCAF11-209ENST00000547018 CHAMP1Q96JM3 812 aa15.6■□□□□ 0.09
SCAF11-209ENST00000547018 NEK4P51957 841 aa15.59■□□□□ 0.09
SCAF11-209ENST00000547018 BEND3Q5T5X7 828 aa15.59■□□□□ 0.09
SCAF11-209ENST00000547018 KIF2CQ99661 725 aa15.59■□□□□ 0.09
SCAF11-209ENST00000547018 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
SCAF11-209ENST00000547018 RHPN1Q8TCX5 695 aa15.59■□□□□ 0.09
SCAF11-209ENST00000547018 CHMP5Q9NZZ3 219 aa15.59■□□□□ 0.09
SCAF11-209ENST00000547018 RGPD2P0DJD1 1756 aa15.58■□□□□ 0.09
SCAF11-209ENST00000547018 FMN2Q9NZ56 1722 aa15.58■□□□□ 0.09
SCAF11-209ENST00000547018 CWC27Q6UX04 472 aaKnown RBP15.58■□□□□ 0.09
SCAF11-209ENST00000547018 BRINP3Q76B58 766 aa15.58■□□□□ 0.09
SCAF11-209ENST00000547018 SLAIN2Q9P270 581 aa15.58■□□□□ 0.09
SCAF11-209ENST00000547018 NDUFB9Q9Y6M9 179 aa15.58■□□□□ 0.09
SCAF11-209ENST00000547018 ANTXR1Q9H6X2 564 aa15.58■□□□□ 0.08
SCAF11-209ENST00000547018 PHKG2P15735 406 aa15.58■□□□□ 0.08
SCAF11-209ENST00000547018 USP26Q9BXU7 913 aa15.57■□□□□ 0.08
SCAF11-209ENST00000547018 ZBTB3Q9H5J0 574 aa15.57■□□□□ 0.08
SCAF11-209ENST00000547018 CHD2O14647 1828 aaKnown RBP15.57■□□□□ 0.08
SCAF11-209ENST00000547018 ERC2O15083 957 aa15.57■□□□□ 0.08
SCAF11-209ENST00000547018 RBM25P49756 843 aaKnown RBP15.57■□□□□ 0.08
SCAF11-209ENST00000547018 UBE3BQ7Z3V4 1068 aa15.56■□□□□ 0.08
SCAF11-209ENST00000547018 SLC52A2Q9HAB3 445 aa15.56■□□□□ 0.08
SCAF11-209ENST00000547018 NEXNQ0ZGT2 675 aa15.56■□□□□ 0.08
SCAF11-209ENST00000547018 KSR2Q6VAB6 950 aa15.56■□□□□ 0.08
SCAF11-209ENST00000547018 K7ELQ4 463 aaPredicted RBP15.56■□□□□ 0.08
SCAF11-209ENST00000547018 LARP1Q6PKG0 1096 aaKnown RBP15.56■□□□□ 0.08
SCAF11-209ENST00000547018 AACSQ86V21 672 aa15.56■□□□□ 0.08
SCAF11-209ENST00000547018 BICC1Q9H694 974 aaKnown RBP15.56■□□□□ 0.08
SCAF11-209ENST00000547018 LTN1O94822 1766 aa15.56■□□□□ 0.08
SCAF11-209ENST00000547018 REC8O95072 547 aa15.55■□□□□ 0.08
SCAF11-209ENST00000547018 DDX58O95786 925 aaKnown RBP15.55■□□□□ 0.08
SCAF11-209ENST00000547018 A1BGP04217 495 aa15.55■□□□□ 0.08
SCAF11-209ENST00000547018 IFIT2P09913 472 aaKnown RBP15.55■□□□□ 0.08
SCAF11-209ENST00000547018 SSFA2P28290 1259 aa15.55■□□□□ 0.08
SCAF11-209ENST00000547018 SUCLG2Q96I99 432 aa15.55■□□□□ 0.08
SCAF11-209ENST00000547018 IL25Q9H293 177 aa15.55■□□□□ 0.08
SCAF11-209ENST00000547018 PALD1Q9ULE6 856 aa15.55■□□□□ 0.08
SCAF11-209ENST00000547018 CEMIPQ8WUJ3 1361 aa15.55■□□□□ 0.08
SCAF11-209ENST00000547018 NWD1Q149M9 1564 aa15.55■□□□□ 0.08
SCAF11-209ENST00000547018 ZGPATQ8N5A5 531 aaKnown RBP15.55■□□□□ 0.08
SCAF11-209ENST00000547018 ADAMTS2O95450 1211 aa15.54■□□□□ 0.08
SCAF11-209ENST00000547018 MCM4P33991 863 aa15.54■□□□□ 0.08
SCAF11-209ENST00000547018 KCNJ4P48050 445 aa15.54■□□□□ 0.08
SCAF11-209ENST00000547018 PKP1Q13835 747 aa15.54■□□□□ 0.08
SCAF11-209ENST00000547018 CLASRPQ8N2M8 674 aaKnown RBP15.54■□□□□ 0.08
SCAF11-209ENST00000547018 ADCY9O60503 1353 aa15.54■□□□□ 0.08
SCAF11-209ENST00000547018 KIF24Q5T7B8 1368 aa15.54■□□□□ 0.08
SCAF11-209ENST00000547018 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCAF11-209ENST00000547018 TNPO1Q92973 898 aaKnown RBP15.53■□□□□ 0.08
SCAF11-209ENST00000547018 BOLA2Q9H3K6 86 aa15.53■□□□□ 0.08
SCAF11-209ENST00000547018 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.53■□□□□ 0.08
SCAF11-209ENST00000547018 CPA1P15085 419 aa15.53■□□□□ 0.08
SCAF11-209ENST00000547018 GRM8O00222 908 aa15.53■□□□□ 0.08
SCAF11-209ENST00000547018 ANKRD13DQ6ZTN6 518 aa15.53■□□□□ 0.08
SCAF11-209ENST00000547018 EDC3Q96F86 508 aaKnown RBP15.53■□□□□ 0.08
SCAF11-209ENST00000547018 NUTM2BA6NNL0 878 aaPredicted RBP15.52■□□□□ 0.08
SCAF11-209ENST00000547018 FAM177BA6PVY3 158 aa15.52■□□□□ 0.08
SCAF11-209ENST00000547018 NUTM2EB1AL46 878 aaPredicted RBP15.52■□□□□ 0.08
SCAF11-209ENST00000547018 NUTM2AQ8IVF1 878 aaPredicted RBP15.52■□□□□ 0.08
SCAF11-209ENST00000547018 ZCRB1Q8TBF4 217 aaKnown RBP15.52■□□□□ 0.08
SCAF11-209ENST00000547018 SSH3Q8TE77 659 aa15.52■□□□□ 0.08
SCAF11-209ENST00000547018 DDX21Q9NR30 783 aaKnown RBP eCLIP15.52■□□□□ 0.08
SCAF11-209ENST00000547018 HYPKQ9NX55 129 aa15.52■□□□□ 0.08
SCAF11-209ENST00000547018 RGPD1P0DJD0 1748 aa15.52■□□□□ 0.08
SCAF11-209ENST00000547018 KIF1BPQ96EK5 621 aa15.52■□□□□ 0.07
SCAF11-209ENST00000547018 EPHA10Q5JZY3 1008 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 TAOK2Q9UL54 1235 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 SPATA31A3Q5VYP0 1347 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 A0A087WZG4 1122 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 CHMLP26374 656 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 NFAT5O94916 1531 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 TRAK2O60296 914 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 TTLL7Q6ZT98 887 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 ESYT1Q9BSJ8 1104 aa15.51■□□□□ 0.07
SCAF11-209ENST00000547018 IBTKQ9P2D0 1353 aaPredicted RBP15.5■□□□□ 0.07
SCAF11-209ENST00000547018 ST18O60284 1047 aa15.5■□□□□ 0.07
SCAF11-209ENST00000547018 IGKV5-2P06315 115 aa15.5■□□□□ 0.07
SCAF11-209ENST00000547018 SNRPA1P09661 255 aaKnown RBP15.5■□□□□ 0.07
SCAF11-209ENST00000547018 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
SCAF11-209ENST00000547018 DIAPH3Q9NSV4 1193 aa15.5■□□□□ 0.07
SCAF11-209ENST00000547018 TLR7Q9NYK1 1049 aaKnown RBP15.5■□□□□ 0.07
SCAF11-209ENST00000547018 KIAA1211Q6ZU35 1233 aa15.5■□□□□ 0.07
SCAF11-209ENST00000547018 NEUROD6Q96NK8 337 aa15.5■□□□□ 0.07
SCAF11-209ENST00000547018 KDM4FA0A1W2PPD8 638 aa15.49■□□□□ 0.07
SCAF11-209ENST00000547018 PIP4K2BP78356 416 aa15.49■□□□□ 0.07
SCAF11-209ENST00000547018 BTG4Q9NY30 223 aa15.49■□□□□ 0.07
SCAF11-209ENST00000547018 AK9Q5TCS8 1911 aa15.49■□□□□ 0.07
SCAF11-209ENST00000547018 RABEP1Q15276 862 aa15.49■□□□□ 0.07
SCAF11-209ENST00000547018 MST1RQ04912 1400 aa15.49■□□□□ 0.07
SCAF11-209ENST00000547018 LINS1Q8NG48 757 aa15.49■□□□□ 0.07
SCAF11-209ENST00000547018 DCAF5Q96JK2 942 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms