RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 TTC5Q8N0Z6 440 aa27.06■■□□□ 1.92
SCN8A-204ENST00000546961 NMRK2Q9NPI5 230 aa27.06■■□□□ 1.92
SCN8A-204ENST00000546961 TOMM70O94826 608 aa27.04■■□□□ 1.92
SCN8A-204ENST00000546961 STARD3NLO95772 234 aa27.04■■□□□ 1.92
SCN8A-204ENST00000546961 IL17REQ8NFR9 667 aa27.04■■□□□ 1.92
SCN8A-204ENST00000546961 GNAT3A8MTJ3 354 aa27.03■■□□□ 1.92
SCN8A-204ENST00000546961 SERPINB2P05120 415 aa27.03■■□□□ 1.92
SCN8A-204ENST00000546961 COL15A1P39059 1388 aa27.03■■□□□ 1.92
SCN8A-204ENST00000546961 TEFQ10587 303 aa27.03■■□□□ 1.92
SCN8A-204ENST00000546961 BCL2L12Q9HB09 334 aa27.03■■□□□ 1.92
SCN8A-204ENST00000546961 MRC1P22897 1456 aa27.02■■□□□ 1.92
SCN8A-204ENST00000546961 GAS2L2Q8NHY3 880 aa27.02■■□□□ 1.92
SCN8A-204ENST00000546961 RNF181Q9P0P0 153 aa27.02■■□□□ 1.92
SCN8A-204ENST00000546961 KCPQ6ZWJ8 1503 aa27■■□□□ 1.91
SCN8A-204ENST00000546961 NPC1L1Q9UHC9 1359 aa27■■□□□ 1.91
SCN8A-204ENST00000546961 BICDL1Q6ZP65 573 aa27■■□□□ 1.91
SCN8A-204ENST00000546961 ZNF496Q96IT1 587 aaPredicted RBP27■■□□□ 1.91
SCN8A-204ENST00000546961 ZNF790Q6PG37 636 aa26.99■■□□□ 1.91
SCN8A-204ENST00000546961 A0A087WZG4 1122 aa26.98■■□□□ 1.91
SCN8A-204ENST00000546961 EIF5P55010 431 aaKnown RBP26.98■■□□□ 1.91
SCN8A-204ENST00000546961 APLP1P51693 650 aa26.97■■□□□ 1.91
SCN8A-204ENST00000546961 C16orf71Q8IYS4 520 aaPredicted RBP26.97■■□□□ 1.91
SCN8A-204ENST00000546961 TEX13AQ9BXU3 409 aaPredicted RBP26.97■■□□□ 1.91
SCN8A-204ENST00000546961 ZNF330Q9Y3S2 320 aaPredicted RBP26.97■■□□□ 1.91
SCN8A-204ENST00000546961 ADAMTS7Q9UKP4 1686 aa26.97■■□□□ 1.91
SCN8A-204ENST00000546961 BRCA1P38398 1863 aaKnown RBP26.97■■□□□ 1.91
SCN8A-204ENST00000546961 C2CD5Q86YS7 1000 aa26.96■■□□□ 1.91
SCN8A-204ENST00000546961 PHACTR3Q96KR7 559 aa26.96■■□□□ 1.91
SCN8A-204ENST00000546961 CFAP53Q96M91 514 aa26.95■■□□□ 1.9
SCN8A-204ENST00000546961 RRAGCQ9HB90 399 aa26.95■■□□□ 1.9
SCN8A-204ENST00000546961 TBC1D2BQ9UPU7 963 aa26.95■■□□□ 1.9
SCN8A-204ENST00000546961 KDM2BQ8NHM5 1336 aa26.94■■□□□ 1.9
SCN8A-204ENST00000546961 H0YIN7 160 aa26.94■■□□□ 1.9
SCN8A-204ENST00000546961 TTLL6Q8N841 843 aa26.94■■□□□ 1.9
SCN8A-204ENST00000546961 HEG1Q9ULI3 1381 aa26.94■■□□□ 1.9
SCN8A-204ENST00000546961 COL3A1P02461 1466 aaPredicted RBP26.93■■□□□ 1.9
SCN8A-204ENST00000546961 ARFGEF1Q9Y6D6 1849 aa26.93■■□□□ 1.9
SCN8A-204ENST00000546961 PRKAR2BP31323 418 aa26.93■■□□□ 1.9
SCN8A-204ENST00000546961 A1BGP04217 495 aa26.92■■□□□ 1.9
SCN8A-204ENST00000546961 RASSF7Q02833 373 aa26.92■■□□□ 1.9
SCN8A-204ENST00000546961 TBC1D9BQ66K14 1250 aa26.92■■□□□ 1.9
SCN8A-204ENST00000546961 RBM46Q8TBY0 533 aaKnown RBP26.92■■□□□ 1.9
SCN8A-204ENST00000546961 FMNL2Q96PY5 1086 aa26.92■■□□□ 1.9
SCN8A-204ENST00000546961 KCNQ3O43525 872 aa26.91■■□□□ 1.9
SCN8A-204ENST00000546961 IFFO2Q5TF58 517 aa26.91■■□□□ 1.9
SCN8A-204ENST00000546961 NPM2Q86SE8 214 aaKnown RBP26.91■■□□□ 1.9
SCN8A-204ENST00000546961 NUDCQ9Y266 331 aa26.91■■□□□ 1.9
SCN8A-204ENST00000546961 BTBD11A6QL63 1104 aa26.9■■□□□ 1.9
SCN8A-204ENST00000546961 VIRMAQ69YN4 1812 aaKnown RBP26.89■■□□□ 1.9
SCN8A-204ENST00000546961 IL6STP40189 918 aaPredicted RBP26.89■■□□□ 1.9
SCN8A-204ENST00000546961 RSPH6AQ9H0K4 717 aa26.89■■□□□ 1.9
SCN8A-204ENST00000546961 LMNB1P20700 586 aa26.88■■□□□ 1.89
SCN8A-204ENST00000546961 CCDC24Q8N4L8 307 aa26.88■■□□□ 1.89
SCN8A-204ENST00000546961 DNAJC5GQ8N7S2 189 aa26.88■■□□□ 1.89
SCN8A-204ENST00000546961 ZNF622Q969S3 477 aaKnown RBP eCLIP26.88■■□□□ 1.89
SCN8A-204ENST00000546961 U2AF1L5P0DN76 240 aaPredicted RBP26.87■■□□□ 1.89
SCN8A-204ENST00000546961 U2AF1Q01081 240 aaKnown RBP eCLIP26.87■■□□□ 1.89
SCN8A-204ENST00000546961 CARMIL3Q8ND23 1372 aa26.86■■□□□ 1.89
SCN8A-204ENST00000546961 AFDNP55196 1824 aaKnown RBP26.86■■□□□ 1.89
SCN8A-204ENST00000546961 BRIP1Q9BX63 1249 aa26.86■■□□□ 1.89
SCN8A-204ENST00000546961 CEMIPQ8WUJ3 1361 aa26.85■■□□□ 1.89
SCN8A-204ENST00000546961 PDE6BP35913 854 aa26.85■■□□□ 1.89
SCN8A-204ENST00000546961 PRELPP51888 382 aa26.85■■□□□ 1.89
SCN8A-204ENST00000546961 FSTL1Q12841 308 aa26.85■■□□□ 1.89
SCN8A-204ENST00000546961 USP16Q9Y5T5 823 aa26.85■■□□□ 1.89
SCN8A-204ENST00000546961 UBR2Q8IWV8 1755 aa26.84■■□□□ 1.89
SCN8A-204ENST00000546961 PPP2R1AP30153 589 aa26.84■■□□□ 1.89
SCN8A-204ENST00000546961 PRR5LQ6MZQ0 368 aa26.84■■□□□ 1.89
SCN8A-204ENST00000546961 RTF1Q92541 710 aaKnown RBP26.84■■□□□ 1.89
SCN8A-204ENST00000546961 SETDB2Q96T68 719 aa26.84■■□□□ 1.89
SCN8A-204ENST00000546961 ZNF219Q9P2Y4 722 aaPredicted RBP26.84■■□□□ 1.89
SCN8A-204ENST00000546961 NPHP1O15259 732 aa26.82■■□□□ 1.88
SCN8A-204ENST00000546961 CAMTA2O94983 1202 aa26.82■■□□□ 1.88
SCN8A-204ENST00000546961 PIP4K2AP48426 406 aaPredicted RBP26.82■■□□□ 1.88
SCN8A-204ENST00000546961 HTRA3P83110 453 aa26.82■■□□□ 1.88
SCN8A-204ENST00000546961 MCM10Q7L590 875 aa26.82■■□□□ 1.88
SCN8A-204ENST00000546961 PDZRN3Q9UPQ7 1066 aa26.82■■□□□ 1.88
SCN8A-204ENST00000546961 NRXN2Q9P2S2 1712 aa26.82■■□□□ 1.88
SCN8A-204ENST00000546961 DZIP3Q86Y13 1208 aaKnown RBP26.81■■□□□ 1.88
SCN8A-204ENST00000546961 SBF1O95248 1867 aa26.81■■□□□ 1.88
SCN8A-204ENST00000546961 PRAMEF22A3QJZ6 481 aa26.8■■□□□ 1.88
SCN8A-204ENST00000546961 GLTPD2A6NH11 291 aa26.8■■□□□ 1.88
SCN8A-204ENST00000546961 NFKBIEO00221 500 aa26.8■■□□□ 1.88
SCN8A-204ENST00000546961 C21orf2O43822 256 aa26.8■■□□□ 1.88
SCN8A-204ENST00000546961 ZC3H4Q9UPT8 1303 aaKnown RBP26.8■■□□□ 1.88
SCN8A-204ENST00000546961 DCTN1Q14203 1278 aa26.79■■□□□ 1.88
SCN8A-204ENST00000546961 SNRPA1P09661 255 aaKnown RBP26.78■■□□□ 1.88
SCN8A-204ENST00000546961 VEGFAP15692 232 aaPredicted RBP26.78■■□□□ 1.88
SCN8A-204ENST00000546961 CNBD1Q8NA66 436 aa26.78■■□□□ 1.88
SCN8A-204ENST00000546961 SMC1BQ8NDV3 1235 aa26.77■■□□□ 1.88
SCN8A-204ENST00000546961 ST5P78524 1137 aa26.76■■□□□ 1.87
SCN8A-204ENST00000546961 DPY19L2Q6NUT2 758 aa26.74■■□□□ 1.87
SCN8A-204ENST00000546961 CNKSR1Q969H4 720 aa26.74■■□□□ 1.87
SCN8A-204ENST00000546961 SIPA1L3O60292 1781 aaPredicted RBP26.74■■□□□ 1.87
SCN8A-204ENST00000546961 HTATSF1O43719 755 aaKnown RBP26.73■■□□□ 1.87
SCN8A-204ENST00000546961 ERFEQ4G0M1 354 aa26.73■■□□□ 1.87
SCN8A-204ENST00000546961 CLEC4GQ6UXB4 293 aa26.73■■□□□ 1.87
SCN8A-204ENST00000546961 KLRG1Q96E93 195 aa26.73■■□□□ 1.87
SCN8A-204ENST00000546961 SRGNP10124 158 aa26.72■■□□□ 1.87
SCN8A-204ENST00000546961 TAF7Q15545 349 aaPredicted RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms