RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 ELL2O00472 640 aaPredicted RBP14.41□□□□□ -0.1
TROAP-204ENST00000546776 KCNQ3O43525 872 aa14.41□□□□□ -0.1
TROAP-204ENST00000546776 PTCD1O75127 700 aaKnown RBP14.41□□□□□ -0.1
TROAP-204ENST00000546776 ATF5Q9Y2D1 282 aaPredicted RBP14.41□□□□□ -0.1
TROAP-204ENST00000546776 CACNA1FO60840 1977 aa14.41□□□□□ -0.1
TROAP-204ENST00000546776 PNPLA7Q6ZV29 1317 aa14.41□□□□□ -0.1
TROAP-204ENST00000546776 LAMB4A4D0S4 1761 aa14.4□□□□□ -0.1
TROAP-204ENST00000546776 HEG1Q9ULI3 1381 aa14.4□□□□□ -0.1
TROAP-204ENST00000546776 VAMP4O75379 141 aa14.4□□□□□ -0.1
TROAP-204ENST00000546776 SNRPA1P09661 255 aaKnown RBP14.4□□□□□ -0.1
TROAP-204ENST00000546776 POLD1P28340 1107 aa14.4□□□□□ -0.1
TROAP-204ENST00000546776 ALDH1L2Q3SY69 923 aa14.4□□□□□ -0.1
TROAP-204ENST00000546776 VSIG10Q8N0Z9 540 aa14.4□□□□□ -0.1
TROAP-204ENST00000546776 TSPYL6Q8N831 410 aa14.4□□□□□ -0.1
TROAP-204ENST00000546776 ZNF496Q96IT1 587 aaPredicted RBP14.4□□□□□ -0.1
TROAP-204ENST00000546776 PDGFDQ9GZP0 370 aaPredicted RBP14.4□□□□□ -0.1
TROAP-204ENST00000546776 KCPQ6ZWJ8 1503 aa14.4□□□□□ -0.1
TROAP-204ENST00000546776 CASZ1Q86V15 1759 aa14.39□□□□□ -0.11
TROAP-204ENST00000546776 C5P01031 1676 aa14.39□□□□□ -0.11
TROAP-204ENST00000546776 SRCAPQ6ZRS2 3230 aa14.39□□□□□ -0.11
TROAP-204ENST00000546776 GIGYF1O75420 1035 aaPredicted RBP14.39□□□□□ -0.11
TROAP-204ENST00000546776 ITPK1Q13572 414 aa14.39□□□□□ -0.11
TROAP-204ENST00000546776 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
TROAP-204ENST00000546776 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.39□□□□□ -0.11
TROAP-204ENST00000546776 LINC00116Q8NCU8 138 aa14.39□□□□□ -0.11
TROAP-204ENST00000546776 STK31Q9BXU1 1019 aa14.39□□□□□ -0.11
TROAP-204ENST00000546776 TEX13AQ9BXU3 409 aaPredicted RBP14.39□□□□□ -0.11
TROAP-204ENST00000546776 SSFA2P28290 1259 aa14.38□□□□□ -0.11
TROAP-204ENST00000546776 RARSP54136 660 aaKnown RBP14.38□□□□□ -0.11
TROAP-204ENST00000546776 KRT24Q2M2I5 525 aa14.38□□□□□ -0.11
TROAP-204ENST00000546776 RC3H1Q5TC82 1133 aaKnown RBP14.38□□□□□ -0.11
TROAP-204ENST00000546776 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
TROAP-204ENST00000546776 SMC4Q9NTJ3 1288 aa14.38□□□□□ -0.11
TROAP-204ENST00000546776 RTCBQ9Y3I0 505 aaKnown RBP14.38□□□□□ -0.11
TROAP-204ENST00000546776 ZNF831Q5JPB2 1677 aa14.38□□□□□ -0.11
TROAP-204ENST00000546776 QSER1Q2KHR3 1735 aa14.38□□□□□ -0.11
TROAP-204ENST00000546776 GNPATO15228 680 aa14.37□□□□□ -0.11
TROAP-204ENST00000546776 COL23A1Q86Y22 540 aaPredicted RBP14.37□□□□□ -0.11
TROAP-204ENST00000546776 C4BP0C0L5 1744 aa14.37□□□□□ -0.11
TROAP-204ENST00000546776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.36□□□□□ -0.11
TROAP-204ENST00000546776 PHF14O94880 888 aa14.36□□□□□ -0.11
TROAP-204ENST00000546776 KIF16BQ96L93 1317 aa14.36□□□□□ -0.11
TROAP-204ENST00000546776 CNTNAP4Q9C0A0 1308 aa14.36□□□□□ -0.11
TROAP-204ENST00000546776 CICQ96RK0 1608 aaPredicted RBP14.35□□□□□ -0.11
TROAP-204ENST00000546776 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 STARD3NLO95772 234 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 ADRA2BP18089 450 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 EIF2S2P20042 333 aaKnown RBP14.35□□□□□ -0.11
TROAP-204ENST00000546776 CANXP27824 592 aaKnown RBP14.35□□□□□ -0.11
TROAP-204ENST00000546776 PTGER2P43116 358 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 TRAPPC3LQ5T215 181 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 SSH1Q8WYL5 1049 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 SLC4A9Q96Q91 983 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 DBF4Q9UBU7 674 aaPredicted RBP14.35□□□□□ -0.11
TROAP-204ENST00000546776 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
TROAP-204ENST00000546776 TAF1LQ8IZX4 1826 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 ERBB4Q15303 1308 aa14.35□□□□□ -0.11
TROAP-204ENST00000546776 IPO8O15397 1037 aaKnown RBP14.34□□□□□ -0.11
TROAP-204ENST00000546776 ARXQ96QS3 562 aa14.34□□□□□ -0.11
TROAP-204ENST00000546776 RPS6KA4O75676 772 aa14.33□□□□□ -0.12
TROAP-204ENST00000546776 BRPF1P55201 1214 aaPredicted RBP14.33□□□□□ -0.12
TROAP-204ENST00000546776 BCL2L13Q9BXK5 485 aa14.33□□□□□ -0.12
TROAP-204ENST00000546776 TJP1Q07157 1748 aa14.32□□□□□ -0.12
TROAP-204ENST00000546776 BCAR3O75815 825 aa14.32□□□□□ -0.12
TROAP-204ENST00000546776 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
TROAP-204ENST00000546776 MS4A1P11836 297 aa14.32□□□□□ -0.12
TROAP-204ENST00000546776 RFC4P35249 363 aa14.32□□□□□ -0.12
TROAP-204ENST00000546776 CRKLP46109 303 aaKnown RBP14.32□□□□□ -0.12
TROAP-204ENST00000546776 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
TROAP-204ENST00000546776 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
TROAP-204ENST00000546776 NECTIN2Q92692 538 aa14.32□□□□□ -0.12
TROAP-204ENST00000546776 PRAMEF22A3QJZ6 481 aa14.31□□□□□ -0.12
TROAP-204ENST00000546776 NEFLP07196 543 aa14.31□□□□□ -0.12
TROAP-204ENST00000546776 RRP1P56182 461 aaKnown RBP14.31□□□□□ -0.12
TROAP-204ENST00000546776 NPM2Q86SE8 214 aaKnown RBP14.31□□□□□ -0.12
TROAP-204ENST00000546776 FRAT1Q92837 279 aaPredicted RBP14.31□□□□□ -0.12
TROAP-204ENST00000546776 SGIP1Q9BQI5 828 aa14.31□□□□□ -0.12
TROAP-204ENST00000546776 DDX21Q9NR30 783 aaKnown RBP eCLIP14.31□□□□□ -0.12
TROAP-204ENST00000546776 CCDC87Q9NVE4 849 aa14.31□□□□□ -0.12
TROAP-204ENST00000546776 HYPKQ9NX55 129 aa14.31□□□□□ -0.12
TROAP-204ENST00000546776 USP16Q9Y5T5 823 aa14.31□□□□□ -0.12
TROAP-204ENST00000546776 COL5A3P25940 1745 aaPredicted RBP14.3□□□□□ -0.12
TROAP-204ENST00000546776 TUBGCP6Q96RT7 1819 aa14.3□□□□□ -0.12
TROAP-204ENST00000546776 TCERG1O14776 1098 aaKnown RBP14.3□□□□□ -0.12
TROAP-204ENST00000546776 ZKSCAN2Q63HK3 967 aa14.3□□□□□ -0.12
TROAP-204ENST00000546776 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
TROAP-204ENST00000546776 CHPF2Q9P2E5 772 aa14.3□□□□□ -0.12
TROAP-204ENST00000546776 PTPRCP08575 1304 aa14.3□□□□□ -0.12
TROAP-204ENST00000546776 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
TROAP-204ENST00000546776 CYP19A1P11511 503 aaPredicted RBP14.29□□□□□ -0.12
TROAP-204ENST00000546776 NLGN1Q8N2Q7 840 aa14.29□□□□□ -0.12
TROAP-204ENST00000546776 ARHGAP45Q92619 1136 aa14.29□□□□□ -0.12
TROAP-204ENST00000546776 ARHGEF1Q92888 912 aaKnown RBP14.29□□□□□ -0.12
TROAP-204ENST00000546776 API5Q9BZZ5 524 aaKnown RBP14.29□□□□□ -0.12
TROAP-204ENST00000546776 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
TROAP-204ENST00000546776 NOB1Q9ULX3 412 aaKnown RBP14.29□□□□□ -0.12
TROAP-204ENST00000546776 UBR3Q6ZT12 1888 aa14.29□□□□□ -0.12
TROAP-204ENST00000546776 DDX58O95786 925 aaKnown RBP14.28□□□□□ -0.12
TROAP-204ENST00000546776 INTS5Q6P9B9 1019 aaKnown RBP14.28□□□□□ -0.12
TROAP-204ENST00000546776 AMIGO3Q86WK7 504 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms