RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 DDR1Q08345 913 aa25.13■■□□□ 1.61
CHPT1-202ENST00000546490 ZBTB1Q9Y2K1 713 aa25.13■■□□□ 1.61
CHPT1-202ENST00000546490 DPEP1P16444 411 aa25.12■■□□□ 1.61
CHPT1-202ENST00000546490 PRKAR2BP31323 418 aa25.11■■□□□ 1.61
CHPT1-202ENST00000546490 USPL1Q5W0Q7 1092 aa25.11■■□□□ 1.61
CHPT1-202ENST00000546490 NUDCQ9Y266 331 aa25.11■■□□□ 1.61
CHPT1-202ENST00000546490 RSPH6AQ9H0K4 717 aa25.1■■□□□ 1.61
CHPT1-202ENST00000546490 NARFQ9UHQ1 456 aa25.1■■□□□ 1.61
CHPT1-202ENST00000546490 CEMIPQ8WUJ3 1361 aa25.09■■□□□ 1.61
CHPT1-202ENST00000546490 HEG1Q9ULI3 1381 aa25.09■■□□□ 1.61
CHPT1-202ENST00000546490 POLRMTO00411 1230 aaKnown RBP25.09■■□□□ 1.61
CHPT1-202ENST00000546490 FCHSD2O94868 740 aa25.09■■□□□ 1.61
CHPT1-202ENST00000546490 IL17REQ8NFR9 667 aa25.09■■□□□ 1.61
CHPT1-202ENST00000546490 ZNF526Q8TF50 670 aaPredicted RBP25.09■■□□□ 1.61
CHPT1-202ENST00000546490 STARD3NLO95772 234 aa25.08■■□□□ 1.61
CHPT1-202ENST00000546490 PPP2R1AP30153 589 aa25.08■■□□□ 1.61
CHPT1-202ENST00000546490 ZNF790Q6PG37 636 aa25.08■■□□□ 1.61
CHPT1-202ENST00000546490 TM4SF1P30408 202 aa25.07■■□□□ 1.6
CHPT1-202ENST00000546490 BCORQ6W2J9 1755 aa25.07■■□□□ 1.6
CHPT1-202ENST00000546490 ZNF496Q96IT1 587 aaPredicted RBP25.06■■□□□ 1.6
CHPT1-202ENST00000546490 PIM2Q9P1W9 311 aa25.06■■□□□ 1.6
CHPT1-202ENST00000546490 U2AF1L5P0DN76 240 aaPredicted RBP25.05■■□□□ 1.6
CHPT1-202ENST00000546490 KCNA3P22001 575 aa25.05■■□□□ 1.6
CHPT1-202ENST00000546490 CANXP27824 592 aaKnown RBP25.05■■□□□ 1.6
CHPT1-202ENST00000546490 U2AF1Q01081 240 aaKnown RBP eCLIP25.05■■□□□ 1.6
CHPT1-202ENST00000546490 PHACTR3Q96KR7 559 aa25.05■■□□□ 1.6
CHPT1-202ENST00000546490 DLG5Q8TDM6 1919 aa25.05■■□□□ 1.6
CHPT1-202ENST00000546490 ARHGAP27Q6ZUM4 889 aa25.04■■□□□ 1.6
CHPT1-202ENST00000546490 TEX13AQ9BXU3 409 aaPredicted RBP25.04■■□□□ 1.6
CHPT1-202ENST00000546490 NFIXQ14938 502 aa25.03■■□□□ 1.6
CHPT1-202ENST00000546490 FMNL2Q96PY5 1086 aa25.03■■□□□ 1.6
CHPT1-202ENST00000546490 SBF1O95248 1867 aa25.02■■□□□ 1.6
CHPT1-202ENST00000546490 A0A087WZG4 1122 aa25.02■■□□□ 1.6
CHPT1-202ENST00000546490 DALRD3Q5D0E6 543 aaKnown RBP25.02■■□□□ 1.6
CHPT1-202ENST00000546490 LAMB4A4D0S4 1761 aa25.01■■□□□ 1.59
CHPT1-202ENST00000546490 ANKRD31Q8N7Z5 1873 aa25.01■■□□□ 1.59
CHPT1-202ENST00000546490 EIF5P55010 431 aaKnown RBP25.01■■□□□ 1.59
CHPT1-202ENST00000546490 BCL2L12Q9HB09 334 aa25.01■■□□□ 1.59
CHPT1-202ENST00000546490 BTBD11A6QL63 1104 aa25■■□□□ 1.59
CHPT1-202ENST00000546490 CHRNA5P30532 468 aa25■■□□□ 1.59
CHPT1-202ENST00000546490 RTF1Q92541 710 aaKnown RBP25■■□□□ 1.59
CHPT1-202ENST00000546490 CEP350Q5VT06 3117 aa25■■□□□ 1.59
CHPT1-202ENST00000546490 SERPINB2P05120 415 aa24.98■■□□□ 1.59
CHPT1-202ENST00000546490 IL6STP40189 918 aaPredicted RBP24.98■■□□□ 1.59
CHPT1-202ENST00000546490 ZNF330Q9Y3S2 320 aaPredicted RBP24.98■■□□□ 1.59
CHPT1-202ENST00000546490 NPM2Q86SE8 214 aaKnown RBP24.97■■□□□ 1.59
CHPT1-202ENST00000546490 COL11A2P13942 1736 aaPredicted RBP24.97■■□□□ 1.59
CHPT1-202ENST00000546490 KDM3BQ7LBC6 1761 aa24.95■■□□□ 1.59
CHPT1-202ENST00000546490 TNRC6CQ9HCJ0 1690 aaKnown RBP24.95■■□□□ 1.58
CHPT1-202ENST00000546490 TIAM2Q8IVF5 1701 aa24.95■■□□□ 1.58
CHPT1-202ENST00000546490 CARMIL3Q8ND23 1372 aa24.94■■□□□ 1.58
CHPT1-202ENST00000546490 CACNA1SQ13698 1873 aa24.94■■□□□ 1.58
CHPT1-202ENST00000546490 BICDL1Q6ZP65 573 aa24.94■■□□□ 1.58
CHPT1-202ENST00000546490 MCM10Q7L590 875 aa24.94■■□□□ 1.58
CHPT1-202ENST00000546490 CCDC88AQ3V6T2 1871 aa24.94■■□□□ 1.58
CHPT1-202ENST00000546490 KIF3CO14782 793 aa24.93■■□□□ 1.58
CHPT1-202ENST00000546490 KCNQ3O43525 872 aa24.93■■□□□ 1.58
CHPT1-202ENST00000546490 HTATSF1O43719 755 aaKnown RBP24.93■■□□□ 1.58
CHPT1-202ENST00000546490 NEFMP07197 916 aa24.93■■□□□ 1.58
CHPT1-202ENST00000546490 C9orf131Q5VYM1 1079 aa24.93■■□□□ 1.58
CHPT1-202ENST00000546490 TBC1D2BQ9UPU7 963 aa24.92■■□□□ 1.58
CHPT1-202ENST00000546490 ARFGEF2Q9Y6D5 1785 aa24.92■■□□□ 1.58
CHPT1-202ENST00000546490 A1BGP04217 495 aa24.91■■□□□ 1.58
CHPT1-202ENST00000546490 TBC1D9BQ66K14 1250 aa24.91■■□□□ 1.58
CHPT1-202ENST00000546490 DCTN1Q14203 1278 aa24.89■■□□□ 1.58
CHPT1-202ENST00000546490 C2CD5Q86YS7 1000 aa24.89■■□□□ 1.58
CHPT1-202ENST00000546490 RNF181Q9P0P0 153 aa24.89■■□□□ 1.58
CHPT1-202ENST00000546490 H0YIN7 160 aa24.88■■□□□ 1.57
CHPT1-202ENST00000546490 SNRPA1P09661 255 aaKnown RBP24.88■■□□□ 1.57
CHPT1-202ENST00000546490 HSPA6P17066 643 aa24.88■■□□□ 1.57
CHPT1-202ENST00000546490 CAMTA2O94983 1202 aa24.87■■□□□ 1.57
CHPT1-202ENST00000546490 DZIP3Q86Y13 1208 aaKnown RBP24.87■■□□□ 1.57
CHPT1-202ENST00000546490 TTLL6Q8N841 843 aa24.87■■□□□ 1.57
CHPT1-202ENST00000546490 PDZRN3Q9UPQ7 1066 aa24.87■■□□□ 1.57
CHPT1-202ENST00000546490 USP16Q9Y5T5 823 aa24.87■■□□□ 1.57
CHPT1-202ENST00000546490 FER1L6Q2WGJ9 1857 aa24.85■■□□□ 1.57
CHPT1-202ENST00000546490 DICER1Q9UPY3 1922 aaKnown RBP24.85■■□□□ 1.57
CHPT1-202ENST00000546490 PRAMEF22A3QJZ6 481 aa24.85■■□□□ 1.57
CHPT1-202ENST00000546490 NPHP1O15259 732 aa24.85■■□□□ 1.57
CHPT1-202ENST00000546490 PRR5LQ6MZQ0 368 aa24.85■■□□□ 1.57
CHPT1-202ENST00000546490 SETDB2Q96T68 719 aa24.85■■□□□ 1.57
CHPT1-202ENST00000546490 NMRK2Q9NPI5 230 aa24.85■■□□□ 1.57
CHPT1-202ENST00000546490 KDM2BQ8NHM5 1336 aa24.85■■□□□ 1.57
CHPT1-202ENST00000546490 TOMM70O94826 608 aa24.84■■□□□ 1.57
CHPT1-202ENST00000546490 PDE6BP35913 854 aa24.84■■□□□ 1.57
CHPT1-202ENST00000546490 PIP4K2AP48426 406 aaPredicted RBP24.84■■□□□ 1.57
CHPT1-202ENST00000546490 RASSF7Q02833 373 aa24.84■■□□□ 1.57
CHPT1-202ENST00000546490 CNBD1Q8NA66 436 aa24.84■■□□□ 1.57
CHPT1-202ENST00000546490 BRIP1Q9BX63 1249 aa24.84■■□□□ 1.57
CHPT1-202ENST00000546490 ZC3H4Q9UPT8 1303 aaKnown RBP24.84■■□□□ 1.57
CHPT1-202ENST00000546490 TAF7Q15545 349 aaPredicted RBP24.83■■□□□ 1.57
CHPT1-202ENST00000546490 ZNF652Q9Y2D9 606 aa24.83■■□□□ 1.57
CHPT1-202ENST00000546490 MAPK8IP3Q9UPT6 1336 aa24.83■■□□□ 1.56
CHPT1-202ENST00000546490 ST5P78524 1137 aa24.82■■□□□ 1.56
CHPT1-202ENST00000546490 PNNQ9H307 717 aaKnown RBP24.82■■□□□ 1.56
CHPT1-202ENST00000546490 PNISRQ8TF01 805 aaKnown RBP24.81■■□□□ 1.56
CHPT1-202ENST00000546490 LMNB1P20700 586 aa24.8■■□□□ 1.56
CHPT1-202ENST00000546490 NFE2L2Q16236 605 aa24.8■■□□□ 1.56
CHPT1-202ENST00000546490 CLEC4GQ6UXB4 293 aa24.8■■□□□ 1.56
CHPT1-202ENST00000546490 ZNF622Q969S3 477 aaKnown RBP eCLIP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms