RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 GSPT1P15170 499 aaKnown RBP14.9□□□□□ -0.02
CCDC38-202ENST00000546386 AAMPQ13685 434 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 PDIA6Q15084 440 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 NUTM1Q86Y26 1132 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 DCTPP1Q9H773 170 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 ATP10DQ9P241 1426 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 KIF1AQ12756 1690 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 PPP1R42Q7Z4L9 355 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 RIC3Q7Z5B4 369 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 SIL1Q9H173 461 aa14.9□□□□□ -0.02
CCDC38-202ENST00000546386 C9orf78Q9NZ63 289 aaPredicted RBP14.9□□□□□ -0.02
CCDC38-202ENST00000546386 SRGAP3O43295 1099 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 FAM182BQ5T319 152 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 PLEKHM2Q8IWE5 1019 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 SLKQ9H2G2 1235 aaPredicted RBP14.89□□□□□ -0.03
CCDC38-202ENST00000546386 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
CCDC38-202ENST00000546386 ASAP1Q9ULH1 1129 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 ADCY9O60503 1353 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 BEND3Q5T5X7 828 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 GCC1Q96CN9 775 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 ACSBG1Q96GR2 724 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 DCAF5Q96JK2 942 aa14.89□□□□□ -0.03
CCDC38-202ENST00000546386 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
CCDC38-202ENST00000546386 SURF6O75683 361 aaKnown RBP14.88□□□□□ -0.03
CCDC38-202ENST00000546386 KCNQ4P56696 695 aa14.88□□□□□ -0.03
CCDC38-202ENST00000546386 MYD88Q99836 296 aa14.88□□□□□ -0.03
CCDC38-202ENST00000546386 MYT1Q01538 1121 aa14.87□□□□□ -0.03
CCDC38-202ENST00000546386 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.87□□□□□ -0.03
CCDC38-202ENST00000546386 CCDC85AQ96PX6 553 aaPredicted RBP14.87□□□□□ -0.03
CCDC38-202ENST00000546386 ZBTB3Q9H5J0 574 aa14.87□□□□□ -0.03
CCDC38-202ENST00000546386 PHRF1Q9P1Y6 1649 aaKnown RBP14.87□□□□□ -0.03
CCDC38-202ENST00000546386 RPAP2Q8IXW5 612 aaPredicted RBP14.86□□□□□ -0.03
CCDC38-202ENST00000546386 TTLL7Q6ZT98 887 aa14.86□□□□□ -0.03
CCDC38-202ENST00000546386 USP54Q70EL1 1684 aa14.86□□□□□ -0.03
CCDC38-202ENST00000546386 COL5A2P05997 1499 aaPredicted RBP14.86□□□□□ -0.03
CCDC38-202ENST00000546386 SOS1Q07889 1333 aaPredicted RBP14.86□□□□□ -0.03
CCDC38-202ENST00000546386 NCOA3Q9Y6Q9 1424 aa14.85□□□□□ -0.03
CCDC38-202ENST00000546386 TBC1D9Q6ZT07 1266 aa14.85□□□□□ -0.03
CCDC38-202ENST00000546386 UBAP1LF5GYI3 381 aa14.85□□□□□ -0.03
CCDC38-202ENST00000546386 SMIM5Q71RC9 77 aa14.85□□□□□ -0.03
CCDC38-202ENST00000546386 IGKV5-2P06315 115 aa14.84□□□□□ -0.03
CCDC38-202ENST00000546386 RILPL2Q969X0 211 aa14.84□□□□□ -0.03
CCDC38-202ENST00000546386 CHMP4BQ9H444 224 aaKnown RBP14.84□□□□□ -0.03
CCDC38-202ENST00000546386 COL18A1P39060 1754 aa14.84□□□□□ -0.03
CCDC38-202ENST00000546386 NBPF26B4DH59 902 aa14.84□□□□□ -0.03
CCDC38-202ENST00000546386 GNAI3P08754 354 aa14.84□□□□□ -0.03
CCDC38-202ENST00000546386 OS9Q13438 667 aaPredicted RBP14.84□□□□□ -0.03
CCDC38-202ENST00000546386 NBPF14Q5TI25 921 aa14.84□□□□□ -0.03
CCDC38-202ENST00000546386 NBPF10Q6P3W6 841 aaKnown RBP14.84□□□□□ -0.03
CCDC38-202ENST00000546386 NBPF15Q8N660 670 aa14.84□□□□□ -0.03
CCDC38-202ENST00000546386 CPDO75976 1380 aa14.83□□□□□ -0.03
CCDC38-202ENST00000546386 SNRPA1P09661 255 aaKnown RBP14.83□□□□□ -0.03
CCDC38-202ENST00000546386 KSR2Q6VAB6 950 aa14.83□□□□□ -0.03
CCDC38-202ENST00000546386 FMNL2Q96PY5 1086 aa14.83□□□□□ -0.03
CCDC38-202ENST00000546386 CARD10Q9BWT7 1032 aa14.83□□□□□ -0.03
CCDC38-202ENST00000546386 C22orf23Q9BZE7 217 aa14.83□□□□□ -0.03
CCDC38-202ENST00000546386 UPF2Q9HAU5 1272 aaKnown RBP14.83□□□□□ -0.03
CCDC38-202ENST00000546386 UNC5CLQ8IV45 518 aa14.83□□□□□ -0.04
CCDC38-202ENST00000546386 PIGBQ92521 554 aa14.83□□□□□ -0.04
CCDC38-202ENST00000546386 DDX21Q9NR30 783 aaKnown RBP eCLIP14.83□□□□□ -0.04
CCDC38-202ENST00000546386 LRRC37A3O60309 1634 aa14.83□□□□□ -0.04
CCDC38-202ENST00000546386 TRIM6-TRIM34B2RNG4 842 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 SDSP20132 328 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 ATP8B2P98198 1209 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 EPHA10Q5JZY3 1008 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 SUCLG2Q96I99 432 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 C8orf37Q96NL8 207 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 CHMP3Q9Y3E7 222 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 UBE3BQ7Z3V4 1068 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 BICC1Q9H694 974 aaKnown RBP14.82□□□□□ -0.04
CCDC38-202ENST00000546386 PCDH11XQ9BZA7 1347 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 PCDH11YQ9BZA8 1340 aa14.82□□□□□ -0.04
CCDC38-202ENST00000546386 HMMRO75330 724 aa14.81□□□□□ -0.04
CCDC38-202ENST00000546386 TMOD3Q9NYL9 352 aa14.81□□□□□ -0.04
CCDC38-202ENST00000546386 FAM177BA6PVY3 158 aa14.81□□□□□ -0.04
CCDC38-202ENST00000546386 PRIM1P49642 420 aaKnown RBP14.81□□□□□ -0.04
CCDC38-202ENST00000546386 LRRCC1Q9C099 1032 aa14.81□□□□□ -0.04
CCDC38-202ENST00000546386 BABAM1Q9NWV8 329 aa14.81□□□□□ -0.04
CCDC38-202ENST00000546386 VIRMAQ69YN4 1812 aaKnown RBP14.81□□□□□ -0.04
CCDC38-202ENST00000546386 SYNE4Q8N205 404 aa14.8□□□□□ -0.04
CCDC38-202ENST00000546386 KAZALD1Q96I82 304 aa14.8□□□□□ -0.04
CCDC38-202ENST00000546386 TBC1D32Q96NH3 1257 aa14.8□□□□□ -0.04
CCDC38-202ENST00000546386 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
CCDC38-202ENST00000546386 NDUFB9Q9Y6M9 179 aa14.8□□□□□ -0.04
CCDC38-202ENST00000546386 NCAPD2Q15021 1401 aa14.8□□□□□ -0.04
CCDC38-202ENST00000546386 FAM208AQ9UK61 1670 aaKnown RBP14.8□□□□□ -0.04
CCDC38-202ENST00000546386 DNAJC10Q8IXB1 793 aa14.8□□□□□ -0.04
CCDC38-202ENST00000546386 PDE1AP54750 535 aa14.79□□□□□ -0.04
CCDC38-202ENST00000546386 BMP2KLQ5H9B9 411 aa14.79□□□□□ -0.04
CCDC38-202ENST00000546386 TTC22Q5TAA0 569 aa14.79□□□□□ -0.04
CCDC38-202ENST00000546386 PTF1AQ7RTS3 328 aa14.79□□□□□ -0.04
CCDC38-202ENST00000546386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.79□□□□□ -0.04
CCDC38-202ENST00000546386 LMO7Q8WWI1 1683 aa14.79□□□□□ -0.04
CCDC38-202ENST00000546386 OVOS2A0A0G2JMS6 1433 aa14.78□□□□□ -0.04
CCDC38-202ENST00000546386 ROBO1Q9Y6N7 1651 aa14.78□□□□□ -0.04
CCDC38-202ENST00000546386 KCNQ2O43526 872 aa14.78□□□□□ -0.04
CCDC38-202ENST00000546386 DTNBO60941 627 aa14.78□□□□□ -0.04
CCDC38-202ENST00000546386 FAM98CQ17RN3 349 aaKnown RBP14.78□□□□□ -0.04
CCDC38-202ENST00000546386 GRM8O00222 908 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms