RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 KIF7Q2M1P5 1343 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 ANKRD36BQ8N2N9 1353 aa8.78□□□□□ -1
PRKDC-211ENST00000546304 KDM4AO75164 1064 aa8.78□□□□□ -1
PRKDC-211ENST00000546304 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
PRKDC-211ENST00000546304 PMFBP1Q8TBY8 1022 aa8.78□□□□□ -1
PRKDC-211ENST00000546304 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
PRKDC-211ENST00000546304 ACEP12821 1306 aa8.78□□□□□ -1
PRKDC-211ENST00000546304 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
PRKDC-211ENST00000546304 FOXO3O43524 673 aa8.77□□□□□ -1.01
PRKDC-211ENST00000546304 NGDNQ8NEJ9 315 aaKnown RBP8.77□□□□□ -1.01
PRKDC-211ENST00000546304 TMC1Q8TDI8 760 aa8.77□□□□□ -1.01
PRKDC-211ENST00000546304 DDX17Q92841 729 aaKnown RBP8.77□□□□□ -1.01
PRKDC-211ENST00000546304 THAP11Q96EK4 314 aa8.77□□□□□ -1.01
PRKDC-211ENST00000546304 POLR3GLQ9BT43 218 aa8.77□□□□□ -1.01
PRKDC-211ENST00000546304 CABP1Q9NZU7 370 aa8.77□□□□□ -1.01
PRKDC-211ENST00000546304 SLC27A5Q9Y2P5 690 aa8.77□□□□□ -1.01
PRKDC-211ENST00000546304 EDC4Q6P2E9 1401 aaKnown RBP8.77□□□□□ -1.01
PRKDC-211ENST00000546304 SOS2Q07890 1332 aaPredicted RBP8.77□□□□□ -1.01
PRKDC-211ENST00000546304 WASHC2AQ641Q2 1341 aa8.77□□□□□ -1.01
PRKDC-211ENST00000546304 SBNO1A3KN83 1393 aa8.76□□□□□ -1.01
PRKDC-211ENST00000546304 KTN1Q86UP2 1357 aaKnown RBP8.76□□□□□ -1.01
PRKDC-211ENST00000546304 C11orf95C9JLR9 678 aaPredicted RBP8.76□□□□□ -1.01
PRKDC-211ENST00000546304 SSTR3P32745 418 aaPredicted RBP8.76□□□□□ -1.01
PRKDC-211ENST00000546304 XPCQ01831 940 aaPredicted RBP8.76□□□□□ -1.01
PRKDC-211ENST00000546304 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
PRKDC-211ENST00000546304 SPSB2Q99619 263 aa8.76□□□□□ -1.01
PRKDC-211ENST00000546304 SSH2Q76I76 1423 aa8.76□□□□□ -1.01
PRKDC-211ENST00000546304 ARHGEF10O15013 1369 aa8.75□□□□□ -1.01
PRKDC-211ENST00000546304 BRD4O60885 1362 aaPredicted RBP8.75□□□□□ -1.01
PRKDC-211ENST00000546304 PNPLA6Q8IY17 1366 aa8.75□□□□□ -1.01
PRKDC-211ENST00000546304 NSD3Q9BZ95 1437 aa8.75□□□□□ -1.01
PRKDC-211ENST00000546304 HSPA1LP34931 641 aa8.75□□□□□ -1.01
PRKDC-211ENST00000546304 PARP9Q8IXQ6 854 aa8.75□□□□□ -1.01
PRKDC-211ENST00000546304 SLC12A5Q9H2X9 1139 aa8.75□□□□□ -1.01
PRKDC-211ENST00000546304 TERF2IPQ9NYB0 399 aa8.75□□□□□ -1.01
PRKDC-211ENST00000546304 JCADQ9P266 1359 aa8.74□□□□□ -1.01
PRKDC-211ENST00000546304 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
PRKDC-211ENST00000546304 PSME1Q06323 249 aa8.74□□□□□ -1.01
PRKDC-211ENST00000546304 BRICD5Q6PL45 260 aa8.74□□□□□ -1.01
PRKDC-211ENST00000546304 HDGFL2Q7Z4V5 671 aaPredicted RBP8.74□□□□□ -1.01
PRKDC-211ENST00000546304 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
PRKDC-211ENST00000546304 HOXA2O43364 376 aa8.73□□□□□ -1.01
PRKDC-211ENST00000546304 FMNL1O95466 1100 aaPredicted RBP8.73□□□□□ -1.01
PRKDC-211ENST00000546304 S1PR4O95977 384 aa8.73□□□□□ -1.01
PRKDC-211ENST00000546304 Q3C1V9 767 aa8.73□□□□□ -1.01
PRKDC-211ENST00000546304 KRT28Q7Z3Y7 464 aa8.73□□□□□ -1.01
PRKDC-211ENST00000546304 SLC6A16Q9GZN6 736 aa8.73□□□□□ -1.01
PRKDC-211ENST00000546304 V9GY48 417 aaPredicted RBP8.73□□□□□ -1.01
PRKDC-211ENST00000546304 SLIT3O75094 1523 aa8.73□□□□□ -1.01
PRKDC-211ENST00000546304 SPATA31A3Q5VYP0 1347 aa8.73□□□□□ -1.01
PRKDC-211ENST00000546304 LTN1O94822 1766 aa8.73□□□□□ -1.01
PRKDC-211ENST00000546304 OVOS2A0A0J9YW53 1432 aa8.72□□□□□ -1.01
PRKDC-211ENST00000546304 OVOS2Q6IE36 1432 aa8.72□□□□□ -1.01
PRKDC-211ENST00000546304 NUTM1Q86Y26 1132 aa8.72□□□□□ -1.01
PRKDC-211ENST00000546304 ANKLE1Q8NAG6 615 aa8.72□□□□□ -1.01
PRKDC-211ENST00000546304 TTC21AQ8NDW8 1320 aa8.72□□□□□ -1.01
PRKDC-211ENST00000546304 LRP6O75581 1613 aa8.72□□□□□ -1.01
PRKDC-211ENST00000546304 PLCH1Q4KWH8 1693 aa8.72□□□□□ -1.01
PRKDC-211ENST00000546304 NFAT5O94916 1531 aa8.71□□□□□ -1.01
PRKDC-211ENST00000546304 PDE4DQ08499 809 aa8.71□□□□□ -1.02
PRKDC-211ENST00000546304 LRRC59Q96AG4 307 aaKnown RBP8.71□□□□□ -1.02
PRKDC-211ENST00000546304 PRKD2Q9BZL6 878 aa8.71□□□□□ -1.02
PRKDC-211ENST00000546304 TTC21BQ7Z4L5 1316 aa8.71□□□□□ -1.02
PRKDC-211ENST00000546304 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
PRKDC-211ENST00000546304 USP19O94966 1318 aa8.7□□□□□ -1.02
PRKDC-211ENST00000546304 NWD2Q9ULI1 1742 aa8.69□□□□□ -1.02
PRKDC-211ENST00000546304 MSS51Q4VC12 460 aa8.69□□□□□ -1.02
PRKDC-211ENST00000546304 RNF19BQ6ZMZ0 732 aa8.69□□□□□ -1.02
PRKDC-211ENST00000546304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.69□□□□□ -1.02
PRKDC-211ENST00000546304 CGNL1Q0VF96 1302 aa8.69□□□□□ -1.02
PRKDC-211ENST00000546304 SPATA31A6Q5VVP1 1343 aa8.69□□□□□ -1.02
PRKDC-211ENST00000546304 NSD2O96028 1365 aa8.69□□□□□ -1.02
PRKDC-211ENST00000546304 USP31Q70CQ4 1352 aa8.69□□□□□ -1.02
PRKDC-211ENST00000546304 ABCC6O95255 1503 aa8.69□□□□□ -1.02
PRKDC-211ENST00000546304 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.68□□□□□ -1.02
PRKDC-211ENST00000546304 COL14A1Q05707 1796 aaKnown RBP8.68□□□□□ -1.02
PRKDC-211ENST00000546304 MS4A1P11836 297 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 NME9Q86XW9 330 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 ABTB2Q8N961 1025 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 HLA-CQ95604 372 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 BEGAINQ9BUH8 593 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 CARD14Q9BXL6 1004 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 PANK3Q9H999 370 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 LMO7Q8WWI1 1683 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 NRAPQ86VF7 1730 aa8.68□□□□□ -1.02
PRKDC-211ENST00000546304 NUTM2GQ5VZR2 741 aa8.67□□□□□ -1.02
PRKDC-211ENST00000546304 MAP2P11137 1827 aaKnown RBP8.66□□□□□ -1.02
PRKDC-211ENST00000546304 PPEF1O14829 653 aaPredicted RBP8.66□□□□□ -1.02
PRKDC-211ENST00000546304 DIXDC1Q155Q3 683 aa8.66□□□□□ -1.02
PRKDC-211ENST00000546304 EMID1Q96A84 441 aaPredicted RBP8.66□□□□□ -1.02
PRKDC-211ENST00000546304 USB1Q9BQ65 265 aaKnown RBP8.66□□□□□ -1.02
PRKDC-211ENST00000546304 IRX2Q9BZI1 471 aaPredicted RBP8.66□□□□□ -1.02
PRKDC-211ENST00000546304 COL18A1P39060 1754 aa8.66□□□□□ -1.02
PRKDC-211ENST00000546304 RGPD5Q99666 1765 aa8.66□□□□□ -1.02
PRKDC-211ENST00000546304 PEAK1Q9H792 1746 aa8.66□□□□□ -1.02
PRKDC-211ENST00000546304 FAM208AQ9UK61 1670 aaKnown RBP8.65□□□□□ -1.02
PRKDC-211ENST00000546304 CPDO75976 1380 aa8.65□□□□□ -1.02
PRKDC-211ENST00000546304 NPC1L1Q9UHC9 1359 aa8.65□□□□□ -1.02
PRKDC-211ENST00000546304 GJA5P36382 358 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms