RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 MARCH10Q8NA82 808 aaPredicted RBP24.57■■□□□ 1.52
SKP2-208ENST00000546211 PCDHB15Q9Y5E8 787 aa24.57■■□□□ 1.52
SKP2-208ENST00000546211 ITGB4P16144 1822 aa24.56■■□□□ 1.52
SKP2-208ENST00000546211 BCL9O00512 1426 aa24.56■■□□□ 1.52
SKP2-208ENST00000546211 GLI3P10071 1580 aa24.56■■□□□ 1.52
SKP2-208ENST00000546211 A0A0G2JS52 829 aa24.55■■□□□ 1.52
SKP2-208ENST00000546211 ANXA1P04083 346 aa24.55■■□□□ 1.52
SKP2-208ENST00000546211 MYT1Q01538 1121 aa24.55■■□□□ 1.52
SKP2-208ENST00000546211 SYTL4Q96C24 671 aaPredicted RBP24.55■■□□□ 1.52
SKP2-208ENST00000546211 USP16Q9Y5T5 823 aa24.55■■□□□ 1.52
SKP2-208ENST00000546211 PXDNLA1KZ92 1463 aa24.55■■□□□ 1.52
SKP2-208ENST00000546211 PTCD1O75127 700 aaKnown RBP24.54■■□□□ 1.52
SKP2-208ENST00000546211 RWDD1Q9H446 243 aaPredicted RBP24.54■■□□□ 1.52
SKP2-208ENST00000546211 LAMB4A4D0S4 1761 aa24.54■■□□□ 1.52
SKP2-208ENST00000546211 DOT1LQ8TEK3 1739 aa24.54■■□□□ 1.52
SKP2-208ENST00000546211 GJD4Q96KN9 370 aaPredicted RBP24.54■■□□□ 1.52
SKP2-208ENST00000546211 TRPC5Q9UL62 973 aaPredicted RBP24.54■■□□□ 1.52
SKP2-208ENST00000546211 PRIM1P49642 420 aaKnown RBP24.53■■□□□ 1.52
SKP2-208ENST00000546211 PROSER3Q2NL68 480 aa24.53■■□□□ 1.52
SKP2-208ENST00000546211 ATG3Q9NT62 314 aa24.53■■□□□ 1.52
SKP2-208ENST00000546211 ASAP1Q9ULH1 1129 aa24.53■■□□□ 1.52
SKP2-208ENST00000546211 ATRNO75882 1429 aa24.53■■□□□ 1.52
SKP2-208ENST00000546211 IGHDP01880 384 aa24.52■■□□□ 1.52
SKP2-208ENST00000546211 PDIA6Q15084 440 aa24.52■■□□□ 1.52
SKP2-208ENST00000546211 ERBB4Q15303 1308 aa24.51■■□□□ 1.51
SKP2-208ENST00000546211 DDX58O95786 925 aaKnown RBP24.5■■□□□ 1.51
SKP2-208ENST00000546211 VSIG10Q8N0Z9 540 aa24.5■■□□□ 1.51
SKP2-208ENST00000546211 THSD7AQ9UPZ6 1657 aa24.5■■□□□ 1.51
SKP2-208ENST00000546211 MYL6BP14649 208 aa24.5■■□□□ 1.51
SKP2-208ENST00000546211 PI4KAP2A4QPH2 592 aa24.49■■□□□ 1.51
SKP2-208ENST00000546211 PI4KAP1Q8N8J0 262 aa24.49■■□□□ 1.51
SKP2-208ENST00000546211 DNAAF4Q8WXU2 420 aa24.49■■□□□ 1.51
SKP2-208ENST00000546211 TEX13AQ9BXU3 409 aaPredicted RBP24.49■■□□□ 1.51
SKP2-208ENST00000546211 HDAC1Q13547 482 aaPredicted RBP24.48■■□□□ 1.51
SKP2-208ENST00000546211 ACSBG1Q96GR2 724 aa24.48■■□□□ 1.51
SKP2-208ENST00000546211 N4BP2Q86UW6 1770 aaPredicted RBP24.47■■□□□ 1.51
SKP2-208ENST00000546211 KSR2Q6VAB6 950 aa24.47■■□□□ 1.51
SKP2-208ENST00000546211 RBM42Q9BTD8 480 aaKnown RBP24.47■■□□□ 1.51
SKP2-208ENST00000546211 SRCIN1Q9C0H9 1055 aa24.46■■□□□ 1.51
SKP2-208ENST00000546211 C1orf115Q9H7X2 142 aa24.46■■□□□ 1.51
SKP2-208ENST00000546211 ADCY9O60503 1353 aa24.46■■□□□ 1.51
SKP2-208ENST00000546211 AIMP1Q12904 312 aaKnown RBP24.46■■□□□ 1.51
SKP2-208ENST00000546211 MEIS3Q99687 375 aa24.46■■□□□ 1.51
SKP2-208ENST00000546211 XAGE3Q8WTP9 111 aa24.45■■□□□ 1.5
SKP2-208ENST00000546211 QTRT2Q9H974 415 aaKnown RBP24.45■■□□□ 1.5
SKP2-208ENST00000546211 MAP3K2Q9Y2U5 619 aa24.45■■□□□ 1.5
SKP2-208ENST00000546211 ATP10DQ9P241 1426 aa24.45■■□□□ 1.5
SKP2-208ENST00000546211 GNAI3P08754 354 aa24.44■■□□□ 1.5
SKP2-208ENST00000546211 COPS6Q7L5N1 327 aa24.43■■□□□ 1.5
SKP2-208ENST00000546211 ONECUT3O60422 494 aaPredicted RBP24.42■■□□□ 1.5
SKP2-208ENST00000546211 PIP4K2AP48426 406 aaPredicted RBP24.42■■□□□ 1.5
SKP2-208ENST00000546211 BEND3Q5T5X7 828 aa24.42■■□□□ 1.5
SKP2-208ENST00000546211 LRP10Q7Z4F1 713 aa24.42■■□□□ 1.5
SKP2-208ENST00000546211 RIC3Q7Z5B4 369 aa24.42■■□□□ 1.5
SKP2-208ENST00000546211 STARD3NLO95772 234 aa24.42■■□□□ 1.5
SKP2-208ENST00000546211 DNAJC10Q8IXB1 793 aa24.42■■□□□ 1.5
SKP2-208ENST00000546211 KAT6BQ8WYB5 2073 aa24.41■■□□□ 1.5
SKP2-208ENST00000546211 A1BGP04217 495 aa24.41■■□□□ 1.5
SKP2-208ENST00000546211 NBPF26B4DH59 902 aa24.4■■□□□ 1.5
SKP2-208ENST00000546211 NBPF14Q5TI25 921 aa24.4■■□□□ 1.5
SKP2-208ENST00000546211 NBPF10Q6P3W6 841 aaKnown RBP24.4■■□□□ 1.5
SKP2-208ENST00000546211 NBPF15Q8N660 670 aa24.4■■□□□ 1.5
SKP2-208ENST00000546211 ALDH1L1O75891 902 aa24.39■■□□□ 1.5
SKP2-208ENST00000546211 GNAI2P04899 355 aa24.39■■□□□ 1.5
SKP2-208ENST00000546211 ANKRD13DQ6ZTN6 518 aa24.39■■□□□ 1.5
SKP2-208ENST00000546211 RPAP2Q8IXW5 612 aaPredicted RBP24.39■■□□□ 1.5
SKP2-208ENST00000546211 SMARCC1Q92922 1105 aaPredicted RBP24.39■■□□□ 1.5
SKP2-208ENST00000546211 SEPT12Q8IYM1 358 aa24.38■■□□□ 1.49
SKP2-208ENST00000546211 KCNQ2O43526 872 aa24.37■■□□□ 1.49
SKP2-208ENST00000546211 NEXNQ0ZGT2 675 aa24.37■■□□□ 1.49
SKP2-208ENST00000546211 UBTFL1P0CB47 393 aaPredicted RBP24.37■■□□□ 1.49
SKP2-208ENST00000546211 ANKRD44Q8N8A2 993 aa24.37■■□□□ 1.49
SKP2-208ENST00000546211 LINS1Q8NG48 757 aa24.37■■□□□ 1.49
SKP2-208ENST00000546211 SLC4A9Q96Q91 983 aa24.37■■□□□ 1.49
SKP2-208ENST00000546211 USP44Q9H0E7 712 aa24.37■■□□□ 1.49
SKP2-208ENST00000546211 ZNF772Q68DY9 489 aaPredicted RBP24.36■■□□□ 1.49
SKP2-208ENST00000546211 PALLDQ8WX93 1383 aa24.35■■□□□ 1.49
SKP2-208ENST00000546211 CEP85Q6P2H3 762 aa24.35■■□□□ 1.49
SKP2-208ENST00000546211 SIRT2Q8IXJ6 389 aa24.35■■□□□ 1.49
SKP2-208ENST00000546211 SMC5Q8IY18 1101 aa24.35■■□□□ 1.49
SKP2-208ENST00000546211 PLBD2Q8NHP8 589 aa24.35■■□□□ 1.49
SKP2-208ENST00000546211 METTL22Q9BUU2 404 aaPredicted RBP24.35■■□□□ 1.49
SKP2-208ENST00000546211 CYP19A1P11511 503 aaPredicted RBP24.34■■□□□ 1.49
SKP2-208ENST00000546211 GCC1Q96CN9 775 aa24.34■■□□□ 1.49
SKP2-208ENST00000546211 TJP1Q07157 1748 aa24.33■■□□□ 1.49
SKP2-208ENST00000546211 LOC102724428A0A0B4J2F2 783 aa24.33■■□□□ 1.48
SKP2-208ENST00000546211 SIK1P57059 783 aa24.33■■□□□ 1.48
SKP2-208ENST00000546211 MYD88Q99836 296 aa24.33■■□□□ 1.48
SKP2-208ENST00000546211 PDZRN3Q9UPQ7 1066 aa24.33■■□□□ 1.48
SKP2-208ENST00000546211 HMMRO75330 724 aa24.32■■□□□ 1.48
SKP2-208ENST00000546211 ATP6V1AP38606 617 aa24.32■■□□□ 1.48
SKP2-208ENST00000546211 CWF19L2Q2TBE0 894 aaKnown RBP24.32■■□□□ 1.48
SKP2-208ENST00000546211 SKAP1Q86WV1 359 aa24.32■■□□□ 1.48
SKP2-208ENST00000546211 C9orf78Q9NZ63 289 aaPredicted RBP24.32■■□□□ 1.48
SKP2-208ENST00000546211 HDAC5Q9UQL6 1122 aa24.32■■□□□ 1.48
SKP2-208ENST00000546211 NHSQ6T4R5 1651 aa24.32■■□□□ 1.48
SKP2-208ENST00000546211 IBTKQ9P2D0 1353 aaPredicted RBP24.31■■□□□ 1.48
SKP2-208ENST00000546211 LRRFIP2Q9Y608 721 aaKnown RBP24.31■■□□□ 1.48
SKP2-208ENST00000546211 FAM182BQ5T319 152 aa24.3■■□□□ 1.48
SKP2-208ENST00000546211 TTLL7Q6ZT98 887 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms