RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 DDR1Q08345 913 aa15.66■□□□□ 0.1
NECAP1-209ENST00000546181 AKAP4Q5JQC9 854 aa15.66■□□□□ 0.1
NECAP1-209ENST00000546181 INTS5Q6P9B9 1019 aaKnown RBP15.66■□□□□ 0.1
NECAP1-209ENST00000546181 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
NECAP1-209ENST00000546181 USP42Q9H9J4 1324 aaKnown RBP15.66■□□□□ 0.1
NECAP1-209ENST00000546181 KCPQ6ZWJ8 1503 aa15.65■□□□□ 0.1
NECAP1-209ENST00000546181 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
NECAP1-209ENST00000546181 MTHFSDQ2M296 383 aaKnown RBP15.65■□□□□ 0.1
NECAP1-209ENST00000546181 CCDC87Q9NVE4 849 aa15.65■□□□□ 0.1
NECAP1-209ENST00000546181 PARP3Q9Y6F1 533 aa15.65■□□□□ 0.1
NECAP1-209ENST00000546181 COL3A1P02461 1466 aaPredicted RBP15.65■□□□□ 0.1
NECAP1-209ENST00000546181 TGFB2P61812 414 aa15.64■□□□□ 0.09
NECAP1-209ENST00000546181 CHRDL2Q6WN34 429 aa15.64■□□□□ 0.09
NECAP1-209ENST00000546181 DIAPH1O60610 1272 aaKnown RBP15.63■□□□□ 0.09
NECAP1-209ENST00000546181 KCNA3P22001 575 aa15.63■□□□□ 0.09
NECAP1-209ENST00000546181 UBR2Q8IWV8 1755 aa15.62■□□□□ 0.09
NECAP1-209ENST00000546181 FCHSD2O94868 740 aa15.62■□□□□ 0.09
NECAP1-209ENST00000546181 ARHGAP27Q6ZUM4 889 aa15.62■□□□□ 0.09
NECAP1-209ENST00000546181 AFDNP55196 1824 aaKnown RBP15.61■□□□□ 0.09
NECAP1-209ENST00000546181 ARFGEF1Q9Y6D6 1849 aa15.61■□□□□ 0.09
NECAP1-209ENST00000546181 CYP19A1P11511 503 aaPredicted RBP15.61■□□□□ 0.09
NECAP1-209ENST00000546181 CHRNA5P30532 468 aa15.61■□□□□ 0.09
NECAP1-209ENST00000546181 USPL1Q5W0Q7 1092 aa15.61■□□□□ 0.09
NECAP1-209ENST00000546181 ZBTB1Q9Y2K1 713 aa15.61■□□□□ 0.09
NECAP1-209ENST00000546181 SOS1Q07889 1333 aaPredicted RBP15.61■□□□□ 0.09
NECAP1-209ENST00000546181 KIF3CO14782 793 aa15.6■□□□□ 0.09
NECAP1-209ENST00000546181 MKRN4PQ13434 485 aaPredicted RBP15.6■□□□□ 0.09
NECAP1-209ENST00000546181 POLRMTO00411 1230 aaKnown RBP15.59■□□□□ 0.09
NECAP1-209ENST00000546181 U2SURPO15042 1029 aaKnown RBP15.59■□□□□ 0.09
NECAP1-209ENST00000546181 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
NECAP1-209ENST00000546181 TM4SF1P30408 202 aa15.58■□□□□ 0.08
NECAP1-209ENST00000546181 COL15A1P39059 1388 aa15.58■□□□□ 0.08
NECAP1-209ENST00000546181 ZPR1O75312 459 aa15.57■□□□□ 0.08
NECAP1-209ENST00000546181 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
NECAP1-209ENST00000546181 BCL2L12Q9HB09 334 aa15.57■□□□□ 0.08
NECAP1-209ENST00000546181 HSPA6P17066 643 aa15.56■□□□□ 0.08
NECAP1-209ENST00000546181 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
NECAP1-209ENST00000546181 NFIXQ14938 502 aa15.56■□□□□ 0.08
NECAP1-209ENST00000546181 IL17REQ8NFR9 667 aa15.56■□□□□ 0.08
NECAP1-209ENST00000546181 NMRK2Q9NPI5 230 aa15.56■□□□□ 0.08
NECAP1-209ENST00000546181 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
NECAP1-209ENST00000546181 NRXN2Q9P2S2 1712 aa15.55■□□□□ 0.08
NECAP1-209ENST00000546181 CARMIL3Q8ND23 1372 aa15.55■□□□□ 0.08
NECAP1-209ENST00000546181 C9orf131Q5VYM1 1079 aa15.55■□□□□ 0.08
NECAP1-209ENST00000546181 ZNF496Q96IT1 587 aaPredicted RBP15.55■□□□□ 0.08
NECAP1-209ENST00000546181 NARFQ9UHQ1 456 aa15.55■□□□□ 0.08
NECAP1-209ENST00000546181 SBF1O95248 1867 aa15.54■□□□□ 0.08
NECAP1-209ENST00000546181 NPC1L1Q9UHC9 1359 aa15.54■□□□□ 0.08
NECAP1-209ENST00000546181 DALRD3Q5D0E6 543 aaKnown RBP15.54■□□□□ 0.08
NECAP1-209ENST00000546181 PHACTR3Q96KR7 559 aa15.54■□□□□ 0.08
NECAP1-209ENST00000546181 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
NECAP1-209ENST00000546181 DLEC1Q9Y238 1755 aa15.53■□□□□ 0.08
NECAP1-209ENST00000546181 GNAT3A8MTJ3 354 aa15.52■□□□□ 0.08
NECAP1-209ENST00000546181 KCNQ3O43525 872 aa15.52■□□□□ 0.08
NECAP1-209ENST00000546181 RASSF7Q02833 373 aa15.52■□□□□ 0.08
NECAP1-209ENST00000546181 TTC5Q8N0Z6 440 aa15.52■□□□□ 0.08
NECAP1-209ENST00000546181 ZNF330Q9Y3S2 320 aaPredicted RBP15.52■□□□□ 0.08
NECAP1-209ENST00000546181 ANKRD31Q8N7Z5 1873 aa15.52■□□□□ 0.07
NECAP1-209ENST00000546181 SCN7AQ01118 1682 aa15.51■□□□□ 0.07
NECAP1-209ENST00000546181 SERPINB2P05120 415 aa15.51■□□□□ 0.07
NECAP1-209ENST00000546181 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
NECAP1-209ENST00000546181 TEFQ10587 303 aa15.51■□□□□ 0.07
NECAP1-209ENST00000546181 ZNF790Q6PG37 636 aa15.51■□□□□ 0.07
NECAP1-209ENST00000546181 VSIG10Q8N0Z9 540 aa15.51■□□□□ 0.07
NECAP1-209ENST00000546181 CCDC24Q8N4L8 307 aa15.51■□□□□ 0.07
NECAP1-209ENST00000546181 RNF181Q9P0P0 153 aa15.51■□□□□ 0.07
NECAP1-209ENST00000546181 HEG1Q9ULI3 1381 aa15.5■□□□□ 0.07
NECAP1-209ENST00000546181 EIF5P55010 431 aaKnown RBP15.5■□□□□ 0.07
NECAP1-209ENST00000546181 GAS2L2Q8NHY3 880 aa15.5■□□□□ 0.07
NECAP1-209ENST00000546181 RSPH6AQ9H0K4 717 aa15.5■□□□□ 0.07
NECAP1-209ENST00000546181 COL11A2P13942 1736 aaPredicted RBP15.49■□□□□ 0.07
NECAP1-209ENST00000546181 CCDC88AQ3V6T2 1871 aa15.49■□□□□ 0.07
NECAP1-209ENST00000546181 A1BGP04217 495 aa15.49■□□□□ 0.07
NECAP1-209ENST00000546181 PIP4K2AP48426 406 aaPredicted RBP15.49■□□□□ 0.07
NECAP1-209ENST00000546181 PRELPP51888 382 aa15.49■□□□□ 0.07
NECAP1-209ENST00000546181 TBC1D9BQ66K14 1250 aa15.49■□□□□ 0.07
NECAP1-209ENST00000546181 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
NECAP1-209ENST00000546181 PRAMEF22A3QJZ6 481 aa15.48■□□□□ 0.07
NECAP1-209ENST00000546181 STARD3NLO95772 234 aa15.48■□□□□ 0.07
NECAP1-209ENST00000546181 CEMIPQ8WUJ3 1361 aa15.48■□□□□ 0.07
NECAP1-209ENST00000546181 TOMM70O94826 608 aa15.47■□□□□ 0.07
NECAP1-209ENST00000546181 PPP2R1AP30153 589 aa15.47■□□□□ 0.07
NECAP1-209ENST00000546181 C2CD5Q86YS7 1000 aa15.47■□□□□ 0.07
NECAP1-209ENST00000546181 CACNA1SQ13698 1873 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 TIAM2Q8IVF5 1701 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 SPDYE6P0CI01 402 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 HTRA3P83110 453 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 DCTN1Q14203 1278 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 SPDYE2Q495Y8 402 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 MCM10Q7L590 875 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 BCORQ6W2J9 1755 aa15.46■□□□□ 0.07
NECAP1-209ENST00000546181 BTBD11A6QL63 1104 aa15.45■□□□□ 0.06
NECAP1-209ENST00000546181 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
NECAP1-209ENST00000546181 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
NECAP1-209ENST00000546181 CFAP53Q96M91 514 aa15.45■□□□□ 0.06
NECAP1-209ENST00000546181 FMNL2Q96PY5 1086 aa15.45■□□□□ 0.06
NECAP1-209ENST00000546181 RRAGCQ9HB90 399 aa15.45■□□□□ 0.06
NECAP1-209ENST00000546181 TNRC6CQ9HCJ0 1690 aaKnown RBP15.44■□□□□ 0.06
NECAP1-209ENST00000546181 WDR90Q96KV7 1748 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms