RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 KNSTRNQ9Y448 316 aa22.76■■□□□ 1.23
CPSF7-225ENST00000545934 TIAM2Q8IVF5 1701 aa22.76■■□□□ 1.23
CPSF7-225ENST00000545934 ANKRD31Q8N7Z5 1873 aa22.75■■□□□ 1.23
CPSF7-225ENST00000545934 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
CPSF7-225ENST00000545934 CHRNA5P30532 468 aa22.75■■□□□ 1.23
CPSF7-225ENST00000545934 USPL1Q5W0Q7 1092 aa22.74■■□□□ 1.23
CPSF7-225ENST00000545934 DICER1Q9UPY3 1922 aaKnown RBP22.73■■□□□ 1.23
CPSF7-225ENST00000545934 RNMTO43148 476 aaKnown RBP22.73■■□□□ 1.23
CPSF7-225ENST00000545934 SCN7AQ01118 1682 aa22.72■■□□□ 1.23
CPSF7-225ENST00000545934 NARFQ9UHQ1 456 aa22.72■■□□□ 1.23
CPSF7-225ENST00000545934 COL15A1P39059 1388 aa22.72■■□□□ 1.23
CPSF7-225ENST00000545934 ZPR1O75312 459 aa22.71■■□□□ 1.23
CPSF7-225ENST00000545934 BCL2L12Q9HB09 334 aa22.71■■□□□ 1.23
CPSF7-225ENST00000545934 RNF181Q9P0P0 153 aa22.71■■□□□ 1.23
CPSF7-225ENST00000545934 KDM2BQ8NHM5 1336 aa22.71■■□□□ 1.23
CPSF7-225ENST00000545934 FSTL1Q12841 308 aa22.7■■□□□ 1.22
CPSF7-225ENST00000545934 SLC39A6Q13433 755 aa22.7■■□□□ 1.22
CPSF7-225ENST00000545934 COL11A2P13942 1736 aaPredicted RBP22.69■■□□□ 1.22
CPSF7-225ENST00000545934 NFIXQ14938 502 aa22.69■■□□□ 1.22
CPSF7-225ENST00000545934 VSIG10Q8N0Z9 540 aa22.69■■□□□ 1.22
CPSF7-225ENST00000545934 ZBTB1Q9Y2K1 713 aa22.69■■□□□ 1.22
CPSF7-225ENST00000545934 FER1L6Q2WGJ9 1857 aa22.68■■□□□ 1.22
CPSF7-225ENST00000545934 ZC3H4Q9UPT8 1303 aaKnown RBP22.68■■□□□ 1.22
CPSF7-225ENST00000545934 MTHFSDQ2M296 383 aaKnown RBP22.68■■□□□ 1.22
CPSF7-225ENST00000545934 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
CPSF7-225ENST00000545934 HMOX1P09601 288 aa22.67■■□□□ 1.22
CPSF7-225ENST00000545934 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
CPSF7-225ENST00000545934 PER1O15534 1290 aaPredicted RBP22.66■■□□□ 1.22
CPSF7-225ENST00000545934 C16orf71Q8IYS4 520 aaPredicted RBP22.66■■□□□ 1.22
CPSF7-225ENST00000545934 RRAGCQ9HB90 399 aa22.66■■□□□ 1.22
CPSF7-225ENST00000545934 CACNA1SQ13698 1873 aa22.66■■□□□ 1.22
CPSF7-225ENST00000545934 ARFGEF2Q9Y6D5 1785 aa22.66■■□□□ 1.22
CPSF7-225ENST00000545934 PRELPP51888 382 aa22.65■■□□□ 1.22
CPSF7-225ENST00000545934 BCORQ6W2J9 1755 aa22.65■■□□□ 1.22
CPSF7-225ENST00000545934 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
CPSF7-225ENST00000545934 SERPINB2P05120 415 aa22.64■■□□□ 1.21
CPSF7-225ENST00000545934 RASSF7Q02833 373 aa22.64■■□□□ 1.21
CPSF7-225ENST00000545934 JMYQ8N9B5 988 aa22.64■■□□□ 1.21
CPSF7-225ENST00000545934 HTRA3P83110 453 aa22.63■■□□□ 1.21
CPSF7-225ENST00000545934 KLRG1Q96E93 195 aa22.63■■□□□ 1.21
CPSF7-225ENST00000545934 DIAPH1O60610 1272 aaKnown RBP22.62■■□□□ 1.21
CPSF7-225ENST00000545934 EIF5P55010 431 aaKnown RBP22.62■■□□□ 1.21
CPSF7-225ENST00000545934 LMNB1P20700 586 aa22.61■■□□□ 1.21
CPSF7-225ENST00000545934 TTLL6Q8N841 843 aa22.6■■□□□ 1.21
CPSF7-225ENST00000545934 CANXP27824 592 aaKnown RBP22.59■■□□□ 1.21
CPSF7-225ENST00000545934 C2CD5Q86YS7 1000 aa22.59■■□□□ 1.21
CPSF7-225ENST00000545934 SMC1BQ8NDV3 1235 aa22.59■■□□□ 1.21
CPSF7-225ENST00000545934 GLTPD2A6NH11 291 aa22.58■■□□□ 1.21
CPSF7-225ENST00000545934 SLX4Q8IY92 1834 aa22.57■■□□□ 1.2
CPSF7-225ENST00000545934 NFKBIEO00221 500 aa22.57■■□□□ 1.2
CPSF7-225ENST00000545934 NPC1L1Q9UHC9 1359 aa22.57■■□□□ 1.2
CPSF7-225ENST00000545934 HEG1Q9ULI3 1381 aa22.57■■□□□ 1.2
CPSF7-225ENST00000545934 A0A087WZG4 1122 aa22.56■■□□□ 1.2
CPSF7-225ENST00000545934 H0YIN7 160 aa22.56■■□□□ 1.2
CPSF7-225ENST00000545934 STARD3NLO95772 234 aa22.56■■□□□ 1.2
CPSF7-225ENST00000545934 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
CPSF7-225ENST00000545934 ZNF496Q96IT1 587 aaPredicted RBP22.56■■□□□ 1.2
CPSF7-225ENST00000545934 PCNTO95613 3336 aa22.56■■□□□ 1.2
CPSF7-225ENST00000545934 ZNF790Q6PG37 636 aa22.55■■□□□ 1.2
CPSF7-225ENST00000545934 TTC5Q8N0Z6 440 aa22.55■■□□□ 1.2
CPSF7-225ENST00000545934 VEGFAP15692 232 aaPredicted RBP22.54■■□□□ 1.2
CPSF7-225ENST00000545934 CC2D1BQ5T0F9 858 aaKnown RBP22.54■■□□□ 1.2
CPSF7-225ENST00000545934 TBC1D9BQ66K14 1250 aa22.54■■□□□ 1.2
CPSF7-225ENST00000545934 CCER1Q8TC90 406 aaPredicted RBP22.54■■□□□ 1.2
CPSF7-225ENST00000545934 CEMIPQ8WUJ3 1361 aa22.53■■□□□ 1.2
CPSF7-225ENST00000545934 BRIP1Q9BX63 1249 aa22.53■■□□□ 1.2
CPSF7-225ENST00000545934 TEX13AQ9BXU3 409 aaPredicted RBP22.53■■□□□ 1.2
CPSF7-225ENST00000545934 PDZRN3Q9UPQ7 1066 aa22.53■■□□□ 1.2
CPSF7-225ENST00000545934 GNAT3A8MTJ3 354 aa22.52■■□□□ 1.2
CPSF7-225ENST00000545934 POTECB2RU33 542 aa22.52■■□□□ 1.2
CPSF7-225ENST00000545934 IL6STP40189 918 aaPredicted RBP22.52■■□□□ 1.2
CPSF7-225ENST00000545934 PRR5LQ6MZQ0 368 aa22.52■■□□□ 1.2
CPSF7-225ENST00000545934 BICDL1Q6ZP65 573 aa22.52■■□□□ 1.2
CPSF7-225ENST00000545934 GAS2L2Q8NHY3 880 aa22.52■■□□□ 1.2
CPSF7-225ENST00000545934 TEFQ10587 303 aa22.51■■□□□ 1.19
CPSF7-225ENST00000545934 PDE6BP35913 854 aa22.49■■□□□ 1.19
CPSF7-225ENST00000545934 COL13A1Q5TAT6 717 aaPredicted RBP22.49■■□□□ 1.19
CPSF7-225ENST00000545934 TBC1D2BQ9UPU7 963 aa22.49■■□□□ 1.19
CPSF7-225ENST00000545934 SCN4AP35499 1836 aa22.48■■□□□ 1.19
CPSF7-225ENST00000545934 LTBP3Q9NS15 1303 aa22.48■■□□□ 1.19
CPSF7-225ENST00000545934 U2SURPO15042 1029 aaKnown RBP22.47■■□□□ 1.19
CPSF7-225ENST00000545934 C21orf2O43822 256 aa22.47■■□□□ 1.19
CPSF7-225ENST00000545934 CAMTA2O94983 1202 aa22.47■■□□□ 1.19
CPSF7-225ENST00000545934 ZNF622Q969S3 477 aaKnown RBP eCLIP22.47■■□□□ 1.192e-6■□□□□ 9.3
CPSF7-225ENST00000545934 FMNL2Q96PY5 1086 aa22.47■■□□□ 1.19
CPSF7-225ENST00000545934 A1BGP04217 495 aa22.46■■□□□ 1.19
CPSF7-225ENST00000545934 LAMB4A4D0S4 1761 aa22.45■■□□□ 1.19
CPSF7-225ENST00000545934 CCDC24Q8N4L8 307 aa22.45■■□□□ 1.18
CPSF7-225ENST00000545934 KCNQ3O43525 872 aa22.44■■□□□ 1.18
CPSF7-225ENST00000545934 DLG5Q8TDM6 1919 aa22.44■■□□□ 1.18
CPSF7-225ENST00000545934 PHACTR3Q96KR7 559 aa22.44■■□□□ 1.18
CPSF7-225ENST00000545934 ERFEQ4G0M1 354 aa22.43■■□□□ 1.18
CPSF7-225ENST00000545934 STYK1Q6J9G0 422 aa22.43■■□□□ 1.18
CPSF7-225ENST00000545934 DPY19L2Q6NUT2 758 aa22.43■■□□□ 1.18
CPSF7-225ENST00000545934 SETDB2Q96T68 719 aa22.43■■□□□ 1.18
CPSF7-225ENST00000545934 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
CPSF7-225ENST00000545934 ZNF330Q9Y3S2 320 aaPredicted RBP22.43■■□□□ 1.18
CPSF7-225ENST00000545934 SRGNP10124 158 aa22.42■■□□□ 1.18
CPSF7-225ENST00000545934 CNBD1Q8NA66 436 aa22.42■■□□□ 1.18
CPSF7-225ENST00000545934 CNKSR1Q969H4 720 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms