RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	POLRMT	O00411	1230 aa	Known RBP	32.01	■■■□□ 2.71
RAP1B-233	ENST00000545720	NRXN2	Q9P2S2	1712 aa		32	■■■□□ 2.71
RAP1B-233	ENST00000545720	TM4SF1	P30408	202 aa		31.99	■■■□□ 2.71
RAP1B-233	ENST00000545720	TTC5	Q8N0Z6	440 aa		31.99	■■■□□ 2.71
RAP1B-233	ENST00000545720	VSIG10	Q8N0Z9	540 aa		31.99	■■■□□ 2.71
RAP1B-233	ENST00000545720	GAS2L2	Q8NHY3	880 aa		31.99	■■■□□ 2.71
RAP1B-233	ENST00000545720	PIM2	Q9P1W9	311 aa		31.99	■■■□□ 2.71
RAP1B-233	ENST00000545720	DLEC1	Q9Y238	1755 aa		31.97	■■■□□ 2.71
RAP1B-233	ENST00000545720	GNAT3	A8MTJ3	354 aa		31.97	■■■□□ 2.71
RAP1B-233	ENST00000545720	NARF	Q9UHQ1	456 aa		31.97	■■■□□ 2.71
RAP1B-233	ENST00000545720	SBF1	O95248	1867 aa		31.97	■■■□□ 2.71
RAP1B-233	ENST00000545720	CHRNA5	P30532	468 aa		31.96	■■■□□ 2.71
RAP1B-233	ENST00000545720	TEF	Q10587	303 aa		31.96	■■■□□ 2.71
RAP1B-233	ENST00000545720	DALRD3	Q5D0E6	543 aa	Known RBP	31.95	■■■□□ 2.71
RAP1B-233	ENST00000545720	IL17RE	Q8NFR9	667 aa		31.95	■■■□□ 2.71
RAP1B-233	ENST00000545720	KIF3C	O14782	793 aa		31.94	■■■□□ 2.7
RAP1B-233	ENST00000545720	CANX	P27824	592 aa	Known RBP	31.94	■■■□□ 2.7
RAP1B-233	ENST00000545720	NFIX	Q14938	502 aa		31.94	■■■□□ 2.7
RAP1B-233	ENST00000545720	SCN7A	Q01118	1682 aa		31.93	■■■□□ 2.7
RAP1B-233	ENST00000545720	CFAP53	Q96M91	514 aa		31.93	■■■□□ 2.7
RAP1B-233	ENST00000545720	ZNF496	Q96IT1	587 aa	Predicted RBP	31.92	■■■□□ 2.7
RAP1B-233	ENST00000545720	STARD3NL	O95772	234 aa		31.91	■■■□□ 2.7
RAP1B-233	ENST00000545720	ZNF790	Q6PG37	636 aa		31.91	■■■□□ 2.7
RAP1B-233	ENST00000545720	BCL2L12	Q9HB09	334 aa		31.91	■■■□□ 2.7
RAP1B-233	ENST00000545720	HEG1	Q9ULI3	1381 aa		31.91	■■■□□ 2.7
RAP1B-233	ENST00000545720	PRKAR2B	P31323	418 aa		31.9	■■■□□ 2.7
RAP1B-233	ENST00000545720	HSPA6	P17066	643 aa		31.89	■■■□□ 2.7
RAP1B-233	ENST00000545720	PHACTR3	Q96KR7	559 aa		31.89	■■■□□ 2.7
RAP1B-233	ENST00000545720	RSPH6A	Q9H0K4	717 aa		31.89	■■■□□ 2.7
RAP1B-233	ENST00000545720	C9orf131	Q5VYM1	1079 aa		31.88	■■■□□ 2.69
RAP1B-233	ENST00000545720	CCDC88A	Q3V6T2	1871 aa		31.87	■■■□□ 2.69
RAP1B-233	ENST00000545720	ANKRD31	Q8N7Z5	1873 aa		31.87	■■■□□ 2.69
RAP1B-233	ENST00000545720	CEMIP	Q8WUJ3	1361 aa		31.87	■■■□□ 2.69
RAP1B-233	ENST00000545720	SERPINB2	P05120	415 aa		31.86	■■■□□ 2.69
RAP1B-233	ENST00000545720	EIF5	P55010	431 aa	Known RBP	31.86	■■■□□ 2.69
RAP1B-233	ENST00000545720	ZNF330	Q9Y3S2	320 aa	Predicted RBP	31.85	■■■□□ 2.69
RAP1B-233	ENST00000545720	BICDL1	Q6ZP65	573 aa		31.84	■■■□□ 2.69
RAP1B-233	ENST00000545720	NUDC	Q9Y266	331 aa		31.84	■■■□□ 2.69
RAP1B-233	ENST00000545720		A0A087WZG4	1122 aa		31.83	■■■□□ 2.69
RAP1B-233	ENST00000545720	PPP2R1A	P30153	589 aa		31.83	■■■□□ 2.69
RAP1B-233	ENST00000545720	FMNL2	Q96PY5	1086 aa		31.83	■■■□□ 2.69
RAP1B-233	ENST00000545720	TEX13A	Q9BXU3	409 aa	Predicted RBP	31.83	■■■□□ 2.69
RAP1B-233	ENST00000545720	NMRK2	Q9NPI5	230 aa		31.83	■■■□□ 2.69
RAP1B-233	ENST00000545720	BCOR	Q6W2J9	1755 aa		31.83	■■■□□ 2.69
RAP1B-233	ENST00000545720	CARMIL3	Q8ND23	1372 aa		31.82	■■■□□ 2.69
RAP1B-233	ENST00000545720	RNF181	Q9P0P0	153 aa		31.82	■■■□□ 2.68
RAP1B-233	ENST00000545720	U2AF1L5	P0DN76	240 aa	Predicted RBP	31.81	■■■□□ 2.68
RAP1B-233	ENST00000545720	U2AF1	Q01081	240 aa	Known RBP eCLIP	31.81	■■■□□ 2.68
RAP1B-233	ENST00000545720	BTBD11	A6QL63	1104 aa		31.8	■■■□□ 2.68
RAP1B-233	ENST00000545720	KCNQ3	O43525	872 aa		31.8	■■■□□ 2.68
RAP1B-233	ENST00000545720	COL11A2	P13942	1736 aa	Predicted RBP	31.8	■■■□□ 2.68
RAP1B-233	ENST00000545720	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.8	■■■□□ 2.68
RAP1B-233	ENST00000545720	DLG5	Q8TDM6	1919 aa		31.79	■■■□□ 2.68
RAP1B-233	ENST00000545720	CACNA1S	Q13698	1873 aa		31.79	■■■□□ 2.68
RAP1B-233	ENST00000545720	TBC1D2B	Q9UPU7	963 aa		31.79	■■■□□ 2.68
RAP1B-233	ENST00000545720	TBC1D9B	Q66K14	1250 aa		31.78	■■■□□ 2.68
RAP1B-233	ENST00000545720	TOMM70	O94826	608 aa		31.77	■■■□□ 2.68
RAP1B-233	ENST00000545720	A1BG	P04217	495 aa		31.77	■■■□□ 2.68
RAP1B-233	ENST00000545720	IL6ST	P40189	918 aa	Predicted RBP	31.77	■■■□□ 2.68
RAP1B-233	ENST00000545720	C2CD5	Q86YS7	1000 aa		31.77	■■■□□ 2.68
RAP1B-233	ENST00000545720	TIAM2	Q8IVF5	1701 aa		31.77	■■■□□ 2.68
RAP1B-233	ENST00000545720	RASSF7	Q02833	373 aa		31.76	■■■□□ 2.67
RAP1B-233	ENST00000545720	MCM10	Q7L590	875 aa		31.74	■■■□□ 2.67
RAP1B-233	ENST00000545720	NPM2	Q86SE8	214 aa	Known RBP	31.74	■■■□□ 2.67
RAP1B-233	ENST00000545720	TTLL6	Q8N841	843 aa		31.74	■■■□□ 2.67
RAP1B-233	ENST00000545720	RTF1	Q92541	710 aa	Known RBP	31.74	■■■□□ 2.67
RAP1B-233	ENST00000545720		H0YIN7	160 aa		31.73	■■■□□ 2.67
RAP1B-233	ENST00000545720	KDM2B	Q8NHM5	1336 aa		31.73	■■■□□ 2.67
RAP1B-233	ENST00000545720	PIP4K2A	P48426	406 aa	Predicted RBP	31.7	■■■□□ 2.67
RAP1B-233	ENST00000545720	DCTN1	Q14203	1278 aa		31.7	■■■□□ 2.67
RAP1B-233	ENST00000545720	CCDC24	Q8N4L8	307 aa		31.7	■■■□□ 2.67
RAP1B-233	ENST00000545720	USP16	Q9Y5T5	823 aa		31.7	■■■□□ 2.67
RAP1B-233	ENST00000545720	LAMB4	A4D0S4	1761 aa		31.69	■■■□□ 2.66
RAP1B-233	ENST00000545720	PRAMEF22	A3QJZ6	481 aa		31.69	■■■□□ 2.66
RAP1B-233	ENST00000545720	CAMTA2	O94983	1202 aa		31.69	■■■□□ 2.66
RAP1B-233	ENST00000545720	C16orf71	Q8IYS4	520 aa	Predicted RBP	31.69	■■■□□ 2.66
RAP1B-233	ENST00000545720	FER1L6	Q2WGJ9	1857 aa		31.69	■■■□□ 2.66
RAP1B-233	ENST00000545720	WDR90	Q96KV7	1748 aa		31.69	■■■□□ 2.66
RAP1B-233	ENST00000545720	PRR5L	Q6MZQ0	368 aa		31.68	■■■□□ 2.66
RAP1B-233	ENST00000545720	DICER1	Q9UPY3	1922 aa	Known RBP	31.68	■■■□□ 2.66
RAP1B-233	ENST00000545720	ARFGEF2	Q9Y6D5	1785 aa		31.67	■■■□□ 2.66
RAP1B-233	ENST00000545720	DZIP3	Q86Y13	1208 aa	Known RBP	31.67	■■■□□ 2.66
RAP1B-233	ENST00000545720	LMNB1	P20700	586 aa		31.66	■■■□□ 2.66
RAP1B-233	ENST00000545720	APLP1	P51693	650 aa		31.66	■■■□□ 2.66
RAP1B-233	ENST00000545720	ZNF622	Q969S3	477 aa	Known RBP eCLIP	31.66	■■■□□ 2.66
RAP1B-233	ENST00000545720	SETDB2	Q96T68	719 aa		31.66	■■■□□ 2.66
RAP1B-233	ENST00000545720	BRIP1	Q9BX63	1249 aa		31.66	■■■□□ 2.66
RAP1B-233	ENST00000545720	NPHP1	O15259	732 aa		31.65	■■■□□ 2.66
RAP1B-233	ENST00000545720	PDE6B	P35913	854 aa		31.65	■■■□□ 2.66
RAP1B-233	ENST00000545720	PRELP	P51888	382 aa		31.65	■■■□□ 2.66
RAP1B-233	ENST00000545720	RBM46	Q8TBY0	533 aa	Known RBP	31.65	■■■□□ 2.66
RAP1B-233	ENST00000545720	SLX4	Q8IY92	1834 aa		31.65	■■■□□ 2.66
RAP1B-233	ENST00000545720	KDM3B	Q7LBC6	1761 aa		31.64	■■■□□ 2.66
RAP1B-233	ENST00000545720	SNRPA1	P09661	255 aa	Known RBP	31.64	■■■□□ 2.66
RAP1B-233	ENST00000545720	CNBD1	Q8NA66	436 aa		31.64	■■■□□ 2.66
RAP1B-233	ENST00000545720	RRAGC	Q9HB90	399 aa		31.64	■■■□□ 2.66
RAP1B-233	ENST00000545720	ZC3H4	Q9UPT8	1303 aa	Known RBP	31.64	■■■□□ 2.66
RAP1B-233	ENST00000545720	PDZRN3	Q9UPQ7	1066 aa		31.63	■■■□□ 2.65
RAP1B-233	ENST00000545720	HTATSF1	O43719	755 aa	Known RBP	31.62	■■■□□ 2.65
RAP1B-233	ENST00000545720	NFKBIE	O00221	500 aa		31.61	■■■□□ 2.65

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms