RNA–Protein interactions for RNA: ENST00000545638.2

NCKAP1L-202, Transcript of NCK associated protein 1 like, humanhuman

TSL 2 BASIC

Gene NCKAP1L, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1L-202ENST00000545638 PTPRCP08575 1304 aa10.95□□□□□ -0.66
NCKAP1L-202ENST00000545638 KRT27Q7Z3Y8 459 aa10.95□□□□□ -0.66
NCKAP1L-202ENST00000545638 PROSER3Q2NL68 480 aa10.95□□□□□ -0.66
NCKAP1L-202ENST00000545638 PDZRN3Q9UPQ7 1066 aa10.95□□□□□ -0.66
NCKAP1L-202ENST00000545638 CHD2O14647 1828 aaKnown RBP10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 CCDC57Q2TAC2 916 aa10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 KSR2Q6VAB6 950 aa10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 GPATCH3Q96I76 525 aa10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 CNNM1Q9NRU3 951 aa10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 ZNF652Q9Y2D9 606 aa10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 CRB1P82279 1406 aa10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 CCDC24Q8N4L8 307 aa10.94□□□□□ -0.66
NCKAP1L-202ENST00000545638 LOC102724428A0A0B4J2F2 783 aa10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 SIK1P57059 783 aa10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 RTCBQ9Y3I0 505 aaKnown RBP10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 PCDHB15Q9Y5E8 787 aa10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 MYOM1P52179 1685 aa10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 SMARCA5O60264 1052 aaPredicted RBP10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 VPS37DQ86XT2 251 aa10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 CLASRPQ8N2M8 674 aaKnown RBP10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 NIP7Q9Y221 180 aaKnown RBP eCLIP10.93□□□□□ -0.66
NCKAP1L-202ENST00000545638 MPHOSPH8Q99549 860 aa10.92□□□□□ -0.66
NCKAP1L-202ENST00000545638 SSH2Q76I76 1423 aa10.92□□□□□ -0.66
NCKAP1L-202ENST00000545638 SPATA31A1Q5TZJ5 1347 aa10.92□□□□□ -0.66
NCKAP1L-202ENST00000545638 FAM161AQ3B820 660 aa10.92□□□□□ -0.66
NCKAP1L-202ENST00000545638 TTLL7Q6ZT98 887 aa10.92□□□□□ -0.66
NCKAP1L-202ENST00000545638 CWC25Q9NXE8 425 aaPredicted RBP10.92□□□□□ -0.66
NCKAP1L-202ENST00000545638 THRAP3Q9Y2W1 955 aaKnown RBP10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 ZNF142P52746 1687 aaPredicted RBP10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 ZNF853P0CG23 659 aa10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 MARCH10Q8NA82 808 aaPredicted RBP10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 FAM89AQ96GI7 184 aa10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 ZNF219Q9P2Y4 722 aaPredicted RBP10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 IGHDP01880 384 aa10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 ARHGAP45Q92619 1136 aa10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 BABAM1Q9NWV8 329 aa10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 XRN1Q8IZH2 1706 aaKnown RBP10.91□□□□□ -0.66
NCKAP1L-202ENST00000545638 VPS72Q15906 364 aa10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 HSP90AB4PQ58FF6 505 aa10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 PPP1R42Q7Z4L9 355 aa10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 ZBTB1Q9Y2K1 713 aa10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 KIAA1211Q6ZU35 1233 aa10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 SMIM5Q71RC9 77 aa10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 RPAP2Q8IXW5 612 aaPredicted RBP10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 TRMT2AQ8IZ69 625 aaKnown RBP10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 LINS1Q8NG48 757 aa10.9□□□□□ -0.66
NCKAP1L-202ENST00000545638 GRM8O00222 908 aa10.9□□□□□ -0.67
NCKAP1L-202ENST00000545638 MAP4K4O95819 1239 aaPredicted RBP10.9□□□□□ -0.67
NCKAP1L-202ENST00000545638 RBM6P78332 1123 aaKnown RBP10.9□□□□□ -0.67
NCKAP1L-202ENST00000545638 NBPF5PQ86XG9 351 aaPredicted RBP10.9□□□□□ -0.67
NCKAP1L-202ENST00000545638 CPDO75976 1380 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 KDRP35968 1356 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 HSP90AB3PQ58FF7 597 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 FAM196AQ6ZSG2 479 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 CCDC87Q9NVE4 849 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 NAP1L2Q9ULW6 460 aaPredicted RBP10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 FGD1P98174 961 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 AAMPQ13685 434 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 NUTM1Q86Y26 1132 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 SETDB2Q96T68 719 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 ATG3Q9NT62 314 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 LMBR1LQ6UX01 489 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 LRRCC1Q9C099 1032 aa10.89□□□□□ -0.67
NCKAP1L-202ENST00000545638 SPATA31A5Q5VU36 1347 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 SPATA31A7Q8IWB4 1347 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 HOXB7P09629 217 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 TRAPPC3LQ5T215 181 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 KNDC1Q76NI1 1749 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 NBPF7P0C2Y1 421 aaPredicted RBP10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 PA2G4Q9UQ80 394 aaKnown RBP10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 FMN2Q9NZ56 1722 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 IFIT5Q13325 482 aaKnown RBP10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 AACSQ86V21 672 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 CEP126Q9P2H0 1117 aa10.88□□□□□ -0.67
NCKAP1L-202ENST00000545638 HCLS1P14317 486 aaPredicted RBP10.87□□□□□ -0.67
NCKAP1L-202ENST00000545638 HSP90B1P14625 803 aaKnown RBP10.87□□□□□ -0.67
NCKAP1L-202ENST00000545638 CRKLP46109 303 aaKnown RBP10.87□□□□□ -0.67
NCKAP1L-202ENST00000545638 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
NCKAP1L-202ENST00000545638 GCC1Q96CN9 775 aa10.87□□□□□ -0.67
NCKAP1L-202ENST00000545638 KIF20BQ96Q89 1820 aa10.87□□□□□ -0.67
NCKAP1L-202ENST00000545638 TSHZ3Q63HK5 1081 aa10.87□□□□□ -0.67
NCKAP1L-202ENST00000545638 ADGRB2O60241 1585 aa10.87□□□□□ -0.67
NCKAP1L-202ENST00000545638 PDE4AP27815 886 aa10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 CHD1LQ86WJ1 897 aa10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 CCDC8Q9H0W5 538 aaPredicted RBP10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 METTL24Q5JXM2 366 aa10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 LDHAL6AQ6ZMR3 332 aa10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 PLBD2Q8NHP8 589 aa10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 KLHDC4Q8TBB5 520 aa10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 MSL1Q68DK7 614 aa10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 MEGF6O75095 1541 aa10.86□□□□□ -0.67
NCKAP1L-202ENST00000545638 ZBTB7BO15156 539 aaPredicted RBP10.85□□□□□ -0.67
NCKAP1L-202ENST00000545638 DIAPH3Q9NSV4 1193 aa10.85□□□□□ -0.67
NCKAP1L-202ENST00000545638 USP32Q8NFA0 1604 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms