RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 SSH2Q76I76 1423 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 POLR3AO14802 1390 aaPredicted RBP4.97□□□□□ -1.61
LINC01965-204ENST00000545549 TONSLQ96HA7 1378 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 FECHP22830 423 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 SOX10P56693 466 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 PTGDRQ13258 359 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 FAM122AQ96E09 287 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 PRAM1Q96QH2 718 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 ZBED2Q9BTP6 218 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 FAM198AQ9UFP1 575 aa4.97□□□□□ -1.61
LINC01965-204ENST00000545549 TOPAZ1Q8N9V7 1692 aa4.96□□□□□ -1.61
LINC01965-204ENST00000545549 PLEKHG3A1L390 1219 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 C3orf80F5H4A9 247 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 WASLO00401 505 aaPredicted RBP4.96□□□□□ -1.62
LINC01965-204ENST00000545549 NEFLP07196 543 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 PADI6Q6TGC4 694 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 CDCA7LQ96GN5 454 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 TESK2Q96S53 571 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 COL25A1Q9BXS0 654 aaPredicted RBP4.96□□□□□ -1.62
LINC01965-204ENST00000545549 BTG4Q9NY30 223 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 STK26Q9P289 416 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 TSKSQ9UJT2 592 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 VPS9D1Q9Y2B5 631 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 TRPM3Q9HCF6 1732 aaPredicted RBP4.96□□□□□ -1.62
LINC01965-204ENST00000545549 RGPD8O14715 1765 aaPredicted RBP4.96□□□□□ -1.62
LINC01965-204ENST00000545549 SPATA31A3Q5VYP0 1347 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 KDM2BQ8NHM5 1336 aa4.96□□□□□ -1.62
LINC01965-204ENST00000545549 COL24A1Q17RW2 1714 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 SBNO1A3KN83 1393 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 PLEKHG2Q9H7P9 1386 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 ANP32CO43423 234 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 FCHSD2O94868 740 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 PRSS12P56730 875 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 ADGRD1Q6QNK2 874 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 ZC3H15Q8WU90 426 aaKnown RBP4.95□□□□□ -1.62
LINC01965-204ENST00000545549 PUS7Q96PZ0 661 aaKnown RBP4.95□□□□□ -1.62
LINC01965-204ENST00000545549 TRAK1Q9UPV9 953 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 ALS2Q96Q42 1657 aa4.95□□□□□ -1.62
LINC01965-204ENST00000545549 KIF1AQ12756 1690 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 TRIM6-TRIM34B2RNG4 842 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 SMAPO00193 183 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 GNPATO15228 680 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 XPCQ01831 940 aaPredicted RBP4.94□□□□□ -1.62
LINC01965-204ENST00000545549 MAP2K1Q02750 393 aaPredicted RBP4.94□□□□□ -1.62
LINC01965-204ENST00000545549 HIC1Q14526 733 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 TXNRD1Q16881 649 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 KIAA1468Q9P260 1216 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 CPSF1Q10570 1443 aaKnown RBP4.94□□□□□ -1.62
LINC01965-204ENST00000545549 CRYBG1Q9Y4K1 1723 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 SPATA31A1Q5TZJ5 1347 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 CD163L1Q9NR16 1453 aa4.94□□□□□ -1.62
LINC01965-204ENST00000545549 BRD4O60885 1362 aaPredicted RBP4.93□□□□□ -1.62
LINC01965-204ENST00000545549 OVOS2A0A0G2JMS6 1433 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 OVOS2A0A0J9YW53 1432 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 FOXO3O43524 673 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 VEGFBP49765 207 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 OVOS2Q6IE36 1432 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 TTC13Q8NBP0 860 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 COL26A1Q96A83 441 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 RRAGCQ9HB90 399 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 SEPT9Q9UHD8 586 aaPredicted RBP4.93□□□□□ -1.62
LINC01965-204ENST00000545549 CD2APQ9Y5K6 639 aa4.93□□□□□ -1.62
LINC01965-204ENST00000545549 CENPJQ9HC77 1338 aaPredicted RBP4.93□□□□□ -1.62
LINC01965-204ENST00000545549 TNRC6CQ9HCJ0 1690 aaKnown RBP4.92□□□□□ -1.62
LINC01965-204ENST00000545549 KCPQ6ZWJ8 1503 aa4.92□□□□□ -1.62
LINC01965-204ENST00000545549 EIF3AQ14152 1382 aaKnown RBP4.92□□□□□ -1.62
LINC01965-204ENST00000545549 TNS3Q68CZ2 1445 aa4.92□□□□□ -1.62
LINC01965-204ENST00000545549 TK2O00142 265 aa4.92□□□□□ -1.62
LINC01965-204ENST00000545549 HRO43593 1189 aa4.92□□□□□ -1.62
LINC01965-204ENST00000545549 DGKZQ13574 1117 aa4.92□□□□□ -1.62
LINC01965-204ENST00000545549 NUDT16Q96DE0 195 aaKnown RBP4.92□□□□□ -1.62
LINC01965-204ENST00000545549 CDK19Q9BWU1 502 aa4.92□□□□□ -1.62
LINC01965-204ENST00000545549 SLC4A5Q9BY07 1137 aa4.92□□□□□ -1.62
LINC01965-204ENST00000545549 MINK1Q8N4C8 1332 aaPredicted RBP4.92□□□□□ -1.62
LINC01965-204ENST00000545549 COL14A1Q05707 1796 aaKnown RBP4.91□□□□□ -1.62
LINC01965-204ENST00000545549 PAPPAQ13219 1627 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 BHMG1C9JSJ3 638 aaPredicted RBP4.91□□□□□ -1.62
LINC01965-204ENST00000545549 ZMYND10O75800 440 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 PRKCSHP14314 528 aaPredicted RBP4.91□□□□□ -1.62
LINC01965-204ENST00000545549 TPRNQ4KMQ1 711 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 ESCO1Q5FWF5 840 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 BARGINQ6ZT62 677 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 NUDT18Q6ZVK8 323 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 KRT28Q7Z3Y7 464 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 PACS2Q86VP3 889 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 CABLES1Q8TDN4 633 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 TATDN2Q93075 761 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 RABGEF1Q9UJ41 708 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 PNMA3Q9UL41 463 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 USP54Q70EL1 1684 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 QRICH2Q9H0J4 1663 aa4.91□□□□□ -1.62
LINC01965-204ENST00000545549 CCER2I3L3R5 266 aa4.9□□□□□ -1.63
LINC01965-204ENST00000545549 PPEF1O14829 653 aaPredicted RBP4.9□□□□□ -1.63
LINC01965-204ENST00000545549 SPNS2Q8IVW8 549 aa4.9□□□□□ -1.63
LINC01965-204ENST00000545549 NLRP7Q8WX94 980 aa4.9□□□□□ -1.63
LINC01965-204ENST00000545549 HIRIP3Q9BW71 556 aaPredicted RBP4.9□□□□□ -1.63
LINC01965-204ENST00000545549 POGKQ9P215 609 aa4.9□□□□□ -1.63
LINC01965-204ENST00000545549 RBM27Q9P2N5 1060 aaKnown RBP4.9□□□□□ -1.63
LINC01965-204ENST00000545549 ADGRG1Q9Y653 693 aa4.9□□□□□ -1.63
LINC01965-204ENST00000545549 ARHGEF10O15013 1369 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms