RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 ADAMTS8Q9UP79 889 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 PEX19P40855 299 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 CCDC96Q2M329 555 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 CCDC158Q5M9N0 1113 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 STIM2Q9P246 746 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-216ENST00000545170 BLOC1S2Q6QNY1 142 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 TRIM22Q8IYM9 498 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 CETN2P41208 172 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 WHAMMP3Q1A5X7 153 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 DIXDC1Q155Q3 683 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 PLEKHH1Q9ULM0 1364 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 CACNA2D3Q8IZS8 1091 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 CCDC186Q7Z3E2 898 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 SMC6Q96SB8 1091 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 VCXQ9H320 206 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 TSPYL4Q9UJ04 414 aa9.95□□□□□ -0.82
ATXN3-216ENST00000545170 RBBP5Q15291 538 aaKnown RBP9.95□□□□□ -0.82
ATXN3-216ENST00000545170 STMN2Q93045 179 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 CCDC97Q96F63 343 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 SCAND2PQ9GZW5 306 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 SAMD15Q9P1V8 674 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 PRPF4BQ13523 1007 aaKnown RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 HS1BP3Q53T59 392 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 DDX19AQ9NUU7 478 aaKnown RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 FRMD3A2A2Y4 597 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 FERP16591 822 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 TEFQ10587 303 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 TDRD12Q587J7 1177 aaKnown RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 PPP1R14CQ8TAE6 165 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 DMTNQ08495 405 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 DBN1Q16643 649 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 SPTY2D1Q68D10 685 aaPredicted RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 RAB3IL1Q8TBN0 382 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 SPATS2LQ9NUQ6 558 aaKnown RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 SOGA1O94964 1423 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 DDX27Q96GQ7 796 aaKnown RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 ANAPC4Q9UJX5 808 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 TPX2Q9ULW0 747 aaKnown RBP9.94□□□□□ -0.82
ATXN3-216ENST00000545170 TRAK1Q9UPV9 953 aa9.94□□□□□ -0.82
ATXN3-216ENST00000545170 CCDC57Q2TAC2 916 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 GIMAP6Q6P9H5 292 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 MRFAP1L1Q96HT8 127 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 ZNF365Q70YC5 407 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 ZNF165P49910 485 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 CCDC174Q6PII3 467 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 SIL1Q9H173 461 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 CEP131Q9UPN4 1083 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 CTAGE9A4FU28 777 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 RHOXF2BP0C7M4 288 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 ERCC3P19447 782 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 PIP4K2BP78356 416 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 ZBTB16Q05516 673 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 SH2D4BQ5SQS7 431 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 RHOXF2Q9BQY4 288 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 EIF4G1Q04637 1599 aaKnown RBP9.93□□□□□ -0.82
ATXN3-216ENST00000545170 BIN1O00499 593 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 TPD52P55327 224 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-216ENST00000545170 CEP85LQ5SZL2 805 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 CWC27Q6UX04 472 aaKnown RBP9.93□□□□□ -0.82
ATXN3-216ENST00000545170 EHBP1Q8NDI1 1231 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 PUF60Q9UHX1 559 aaKnown RBP9.93□□□□□ -0.82
ATXN3-216ENST00000545170 CDKL5O76039 1030 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 TSNAXIP1Q2TAA8 658 aa9.93□□□□□ -0.82
ATXN3-216ENST00000545170 STMN4Q9H169 189 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-216ENST00000545170 MVPQ14764 893 aaKnown RBP9.92□□□□□ -0.82
ATXN3-216ENST00000545170 MORC4Q8TE76 937 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 COG3Q96JB2 828 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 VPS36Q86VN1 386 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 CTCFLQ8NI51 663 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-216ENST00000545170 MICAL1Q8TDZ2 1067 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 TSPYL2Q9H2G4 693 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-216ENST00000545170 CASQ2O14958 399 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-216ENST00000545170 WHAMMQ8TF30 809 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 TTC14Q96N46 770 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 SEC62Q99442 399 aaKnown RBP9.92□□□□□ -0.82
ATXN3-216ENST00000545170 TRIM7Q9C029 511 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 ANO6Q4KMQ2 910 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 TRIM4Q9C037 500 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 MACROD2A1Z1Q3 448 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 PFDN1O60925 122 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 GNAI2P04899 355 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 NUTM2DQ5VT03 806 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-216ENST00000545170 SYT10Q6XYQ8 523 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 MYRIPQ8NFW9 859 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 IFT74Q96LB3 600 aa9.92□□□□□ -0.82
ATXN3-216ENST00000545170 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
ATXN3-216ENST00000545170 CIB2O75838 187 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 ZC3H6P61129 1189 aaKnown RBP9.91□□□□□ -0.82
ATXN3-216ENST00000545170 SETDB1Q15047 1291 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 CFAP58Q5T655 872 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 GNAI3P08754 354 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 UBE2HP62256 183 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 ISM2Q6H9L7 571 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 FSIP1Q8NA03 581 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 GBP5Q96PP8 586 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 RABEP2Q9H5N1 569 aa9.91□□□□□ -0.82
ATXN3-216ENST00000545170 DESP17661 470 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms