RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 UBR2Q8IWV8 1755 aa19.01■□□□□ 0.63
DDX11-228ENST00000545115 GAS2L2Q8NHY3 880 aa19.01■□□□□ 0.63
DDX11-228ENST00000545115 NARFQ9UHQ1 456 aa19.01■□□□□ 0.63
DDX11-228ENST00000545115 ARFGEF1Q9Y6D6 1849 aa19■□□□□ 0.63
DDX11-228ENST00000545115 KIF3CO14782 793 aa19■□□□□ 0.63
DDX11-228ENST00000545115 DALRD3Q5D0E6 543 aaKnown RBP19■□□□□ 0.63
DDX11-228ENST00000545115 GNAT3A8MTJ3 354 aa18.99■□□□□ 0.63
DDX11-228ENST00000545115 HSPA6P17066 643 aa18.99■□□□□ 0.63
DDX11-228ENST00000545115 TEFQ10587 303 aa18.99■□□□□ 0.63
DDX11-228ENST00000545115 CHRNA5P30532 468 aa18.98■□□□□ 0.63
DDX11-228ENST00000545115 NFIXQ14938 502 aa18.98■□□□□ 0.63
DDX11-228ENST00000545115 STARD3NLO95772 234 aa18.97■□□□□ 0.63
DDX11-228ENST00000545115 CANXP27824 592 aaKnown RBP18.97■□□□□ 0.63
DDX11-228ENST00000545115 ZNF790Q6PG37 636 aa18.97■□□□□ 0.63
DDX11-228ENST00000545115 IL17REQ8NFR9 667 aa18.97■□□□□ 0.63
DDX11-228ENST00000545115 CFAP53Q96M91 514 aa18.97■□□□□ 0.63
DDX11-228ENST00000545115 HEG1Q9ULI3 1381 aa18.96■□□□□ 0.63
DDX11-228ENST00000545115 C9orf131Q5VYM1 1079 aa18.96■□□□□ 0.63
DDX11-228ENST00000545115 ZNF496Q96IT1 587 aaPredicted RBP18.96■□□□□ 0.63
DDX11-228ENST00000545115 BCL2L12Q9HB09 334 aa18.96■□□□□ 0.63
DDX11-228ENST00000545115 NRXN2Q9P2S2 1712 aa18.95■□□□□ 0.62
DDX11-228ENST00000545115 CEMIPQ8WUJ3 1361 aa18.94■□□□□ 0.62
DDX11-228ENST00000545115 SIPA1L3O60292 1781 aaPredicted RBP18.94■□□□□ 0.62
DDX11-228ENST00000545115 A0A087WZG4 1122 aa18.94■□□□□ 0.62
DDX11-228ENST00000545115 SERPINB2P05120 415 aa18.94■□□□□ 0.62
DDX11-228ENST00000545115 PRKAR2BP31323 418 aa18.94■□□□□ 0.62
DDX11-228ENST00000545115 EIF5P55010 431 aaKnown RBP18.94■□□□□ 0.62
DDX11-228ENST00000545115 TEX13AQ9BXU3 409 aaPredicted RBP18.94■□□□□ 0.62
DDX11-228ENST00000545115 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
DDX11-228ENST00000545115 AFDNP55196 1824 aaKnown RBP18.94■□□□□ 0.62
DDX11-228ENST00000545115 NUDCQ9Y266 331 aa18.93■□□□□ 0.62
DDX11-228ENST00000545115 CEP350Q5VT06 3117 aa18.92■□□□□ 0.62
DDX11-228ENST00000545115 TOMM70O94826 608 aa18.92■□□□□ 0.62
DDX11-228ENST00000545115 PHACTR3Q96KR7 559 aa18.92■□□□□ 0.62
DDX11-228ENST00000545115 FMNL2Q96PY5 1086 aa18.92■□□□□ 0.62
DDX11-228ENST00000545115 NMRK2Q9NPI5 230 aa18.92■□□□□ 0.62
DDX11-228ENST00000545115 RNF181Q9P0P0 153 aa18.92■□□□□ 0.62
DDX11-228ENST00000545115 SCN7AQ01118 1682 aa18.9■□□□□ 0.62
DDX11-228ENST00000545115 BTBD11A6QL63 1104 aa18.9■□□□□ 0.62
DDX11-228ENST00000545115 IL6STP40189 918 aaPredicted RBP18.9■□□□□ 0.62
DDX11-228ENST00000545115 BICDL1Q6ZP65 573 aa18.9■□□□□ 0.62
DDX11-228ENST00000545115 ZNF330Q9Y3S2 320 aaPredicted RBP18.9■□□□□ 0.62
DDX11-228ENST00000545115 DLEC1Q9Y238 1755 aa18.89■□□□□ 0.61
DDX11-228ENST00000545115 PPP2R1AP30153 589 aa18.89■□□□□ 0.61
DDX11-228ENST00000545115 CARMIL3Q8ND23 1372 aa18.89■□□□□ 0.61
DDX11-228ENST00000545115 U2AF1L5P0DN76 240 aaPredicted RBP18.88■□□□□ 0.61
DDX11-228ENST00000545115 U2AF1Q01081 240 aaKnown RBP eCLIP18.88■□□□□ 0.61
DDX11-228ENST00000545115 TBC1D9BQ66K14 1250 aa18.88■□□□□ 0.61
DDX11-228ENST00000545115 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
DDX11-228ENST00000545115 TTLL6Q8N841 843 aa18.88■□□□□ 0.61
DDX11-228ENST00000545115 KDM2BQ8NHM5 1336 aa18.88■□□□□ 0.61
DDX11-228ENST00000545115 H0YIN7 160 aa18.87■□□□□ 0.61
DDX11-228ENST00000545115 C2CD5Q86YS7 1000 aa18.87■□□□□ 0.61
DDX11-228ENST00000545115 RTF1Q92541 710 aaKnown RBP18.87■□□□□ 0.61
DDX11-228ENST00000545115 TBC1D2BQ9UPU7 963 aa18.87■□□□□ 0.61
DDX11-228ENST00000545115 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
DDX11-228ENST00000545115 KCNQ3O43525 872 aa18.86■□□□□ 0.61
DDX11-228ENST00000545115 A1BGP04217 495 aa18.86■□□□□ 0.61
DDX11-228ENST00000545115 APLP1P51693 650 aa18.86■□□□□ 0.61
DDX11-228ENST00000545115 RASSF7Q02833 373 aa18.86■□□□□ 0.61
DDX11-228ENST00000545115 C16orf71Q8IYS4 520 aaPredicted RBP18.86■□□□□ 0.61
DDX11-228ENST00000545115 RBM46Q8TBY0 533 aaKnown RBP18.85■□□□□ 0.61
DDX11-228ENST00000545115 SBF1O95248 1867 aa18.85■□□□□ 0.61
DDX11-228ENST00000545115 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
DDX11-228ENST00000545115 TNRC6CQ9HCJ0 1690 aaKnown RBP18.83■□□□□ 0.61
DDX11-228ENST00000545115 CAMTA2O94983 1202 aa18.83■□□□□ 0.6
DDX11-228ENST00000545115 LMNB1P20700 586 aa18.83■□□□□ 0.6
DDX11-228ENST00000545115 PDE6BP35913 854 aa18.83■□□□□ 0.6
DDX11-228ENST00000545115 PRR5LQ6MZQ0 368 aa18.83■□□□□ 0.6
DDX11-228ENST00000545115 MCM10Q7L590 875 aa18.83■□□□□ 0.6
DDX11-228ENST00000545115 BRIP1Q9BX63 1249 aa18.83■□□□□ 0.6
DDX11-228ENST00000545115 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
DDX11-228ENST00000545115 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
DDX11-228ENST00000545115 SETDB2Q96T68 719 aa18.82■□□□□ 0.6
DDX11-228ENST00000545115 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
DDX11-228ENST00000545115 ANKRD31Q8N7Z5 1873 aa18.82■□□□□ 0.6
DDX11-228ENST00000545115 BCORQ6W2J9 1755 aa18.81■□□□□ 0.6
DDX11-228ENST00000545115 NPHP1O15259 732 aa18.81■□□□□ 0.6
DDX11-228ENST00000545115 SNRPA1P09661 255 aaKnown RBP18.81■□□□□ 0.6
DDX11-228ENST00000545115 CNBD1Q8NA66 436 aa18.81■□□□□ 0.6
DDX11-228ENST00000545115 RRAGCQ9HB90 399 aa18.81■□□□□ 0.6
DDX11-228ENST00000545115 PRAMEF22A3QJZ6 481 aa18.8■□□□□ 0.6
DDX11-228ENST00000545115 NFKBIEO00221 500 aa18.8■□□□□ 0.6
DDX11-228ENST00000545115 FSTL1Q12841 308 aa18.8■□□□□ 0.6
DDX11-228ENST00000545115 DCTN1Q14203 1278 aa18.8■□□□□ 0.6
DDX11-228ENST00000545115 CCDC24Q8N4L8 307 aa18.8■□□□□ 0.6
DDX11-228ENST00000545115 ZNF622Q969S3 477 aaKnown RBP eCLIP18.8■□□□□ 0.66e-9■□□□□ 11.1
DDX11-228ENST00000545115 PIP4K2AP48426 406 aaPredicted RBP18.79■□□□□ 0.6
DDX11-228ENST00000545115 PRELPP51888 382 aa18.79■□□□□ 0.6
DDX11-228ENST00000545115 ST5P78524 1137 aa18.79■□□□□ 0.6
DDX11-228ENST00000545115 COL11A2P13942 1736 aaPredicted RBP18.79■□□□□ 0.6
DDX11-228ENST00000545115 GLTPD2A6NH11 291 aa18.78■□□□□ 0.6
DDX11-228ENST00000545115 CLEC4GQ6UXB4 293 aa18.78■□□□□ 0.6
DDX11-228ENST00000545115 ZNF652Q9Y2D9 606 aa18.78■□□□□ 0.6
DDX11-228ENST00000545115 TIAM2Q8IVF5 1701 aa18.77■□□□□ 0.6
DDX11-228ENST00000545115 NEFMP07197 916 aa18.77■□□□□ 0.6
DDX11-228ENST00000545115 C21orf2O43822 256 aa18.76■□□□□ 0.59
DDX11-228ENST00000545115 TAF7Q15545 349 aaPredicted RBP18.76■□□□□ 0.59
DDX11-228ENST00000545115 CNKSR1Q969H4 720 aa18.76■□□□□ 0.59
DDX11-228ENST00000545115 WDR90Q96KV7 1748 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms