RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 GAS2L2Q8NHY3 880 aa12.58□□□□□ -0.4
CIT-216ENST00000544872 RGPD5Q99666 1765 aa12.58□□□□□ -0.4
CIT-216ENST00000544872 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
CIT-216ENST00000544872 POTECB2RU33 542 aa12.57□□□□□ -0.4
CIT-216ENST00000544872 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
CIT-216ENST00000544872 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
CIT-216ENST00000544872 LMNB1P20700 586 aa12.57□□□□□ -0.4
CIT-216ENST00000544872 ZNF530Q6P9A1 599 aaPredicted RBP12.57□□□□□ -0.4
CIT-216ENST00000544872 RTF1Q92541 710 aaKnown RBP12.57□□□□□ -0.4
CIT-216ENST00000544872 RASSF10A6NK89 507 aa12.56□□□□□ -0.4
CIT-216ENST00000544872 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
CIT-216ENST00000544872 C5P01031 1676 aa12.56□□□□□ -0.4
CIT-216ENST00000544872 SSFA2P28290 1259 aa12.55□□□□□ -0.4
CIT-216ENST00000544872 AKAP4Q5JQC9 854 aa12.55□□□□□ -0.4
CIT-216ENST00000544872 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
CIT-216ENST00000544872 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
CIT-216ENST00000544872 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
CIT-216ENST00000544872 CABP4P57796 275 aa12.54□□□□□ -0.4
CIT-216ENST00000544872 AEBP1Q8IUX7 1158 aa12.54□□□□□ -0.4
CIT-216ENST00000544872 MRS2Q9HD23 443 aa12.54□□□□□ -0.4
CIT-216ENST00000544872 SBF1O95248 1867 aa12.54□□□□□ -0.4
CIT-216ENST00000544872 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
CIT-216ENST00000544872 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
CIT-216ENST00000544872 CASP8AP2Q9UKL3 1982 aa12.53□□□□□ -0.4
CIT-216ENST00000544872 PHKG2P15735 406 aa12.53□□□□□ -0.4
CIT-216ENST00000544872 KCNA3P22001 575 aa12.53□□□□□ -0.4
CIT-216ENST00000544872 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
CIT-216ENST00000544872 SMARCC1Q92922 1105 aaPredicted RBP12.53□□□□□ -0.4
CIT-216ENST00000544872 TMOD3Q9NYL9 352 aa12.53□□□□□ -0.4
CIT-216ENST00000544872 PARP3Q9Y6F1 533 aa12.53□□□□□ -0.4
CIT-216ENST00000544872 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
CIT-216ENST00000544872 DOT1LQ8TEK3 1739 aa12.52□□□□□ -0.41
CIT-216ENST00000544872 LTN1O94822 1766 aa12.52□□□□□ -0.41
CIT-216ENST00000544872 GNAT3A8MTJ3 354 aa12.52□□□□□ -0.41
CIT-216ENST00000544872 ERVV-2B6SEH9 535 aa12.52□□□□□ -0.41
CIT-216ENST00000544872 ECE1P42892 770 aa12.52□□□□□ -0.41
CIT-216ENST00000544872 FXR1P51114 621 aaKnown RBP eCLIP12.52□□□□□ -0.41
CIT-216ENST00000544872 NKX1-1Q15270 411 aaPredicted RBP12.52□□□□□ -0.41
CIT-216ENST00000544872 MPRIPQ6WCQ1 1025 aa12.52□□□□□ -0.41
CIT-216ENST00000544872 GPR101Q96P66 508 aaPredicted RBP12.52□□□□□ -0.41
CIT-216ENST00000544872 KDRP35968 1356 aa12.52□□□□□ -0.41
CIT-216ENST00000544872 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 CYP27B1O15528 508 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 LMOD3Q0VAK6 560 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 TEFQ10587 303 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 CAPNS2Q96L46 248 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 CLEC11AQ9Y240 323 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 PITPNM2Q9BZ72 1349 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 PALLDQ8WX93 1383 aa12.51□□□□□ -0.41
CIT-216ENST00000544872 GNPATO15228 680 aa12.5□□□□□ -0.41
CIT-216ENST00000544872 CA12O43570 354 aa12.5□□□□□ -0.41
CIT-216ENST00000544872 HTATSF1O43719 755 aaKnown RBP12.5□□□□□ -0.41
CIT-216ENST00000544872 MTHFSDQ2M296 383 aaKnown RBP12.5□□□□□ -0.41
CIT-216ENST00000544872 RSPH6AQ9H0K4 717 aa12.5□□□□□ -0.41
CIT-216ENST00000544872 MEGF6O75095 1541 aa12.5□□□□□ -0.41
CIT-216ENST00000544872 FAM208AQ9UK61 1670 aaKnown RBP12.5□□□□□ -0.41
CIT-216ENST00000544872 BRCA1P38398 1863 aaKnown RBP12.49□□□□□ -0.41
CIT-216ENST00000544872 C4BP0C0L5 1744 aa12.49□□□□□ -0.41
CIT-216ENST00000544872 EAPPQ56P03 285 aaPredicted RBP12.49□□□□□ -0.41
CIT-216ENST00000544872 RUNDC1Q96C34 613 aa12.49□□□□□ -0.41
CIT-216ENST00000544872 NCAPD2Q15021 1401 aa12.48□□□□□ -0.41
CIT-216ENST00000544872 CHRNA5P30532 468 aa12.48□□□□□ -0.41
CIT-216ENST00000544872 KDM6AO15550 1401 aaPredicted RBP12.47□□□□□ -0.41
CIT-216ENST00000544872 CYP4F22Q6NT55 531 aa12.47□□□□□ -0.41
CIT-216ENST00000544872 TTC5Q8N0Z6 440 aa12.47□□□□□ -0.41
CIT-216ENST00000544872 ADAMTS8Q9UP79 889 aa12.47□□□□□ -0.41
CIT-216ENST00000544872 IQCA1LA6NCM1 817 aa12.46□□□□□ -0.41
CIT-216ENST00000544872 ITGBL1O95965 494 aaPredicted RBP12.46□□□□□ -0.41
CIT-216ENST00000544872 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.41
CIT-216ENST00000544872 NFE2L2Q16236 605 aa12.46□□□□□ -0.41
CIT-216ENST00000544872 UBR3Q6ZT12 1888 aa12.46□□□□□ -0.42
CIT-216ENST00000544872 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.42
CIT-216ENST00000544872 TAF1LQ8IZX4 1826 aa12.46□□□□□ -0.42
CIT-216ENST00000544872 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
CIT-216ENST00000544872 DDNO94850 711 aaPredicted RBP12.45□□□□□ -0.42
CIT-216ENST00000544872 RIPK4P57078 832 aa12.45□□□□□ -0.42
CIT-216ENST00000544872 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
CIT-216ENST00000544872 NFATC2IPQ8NCF5 419 aa12.45□□□□□ -0.42
CIT-216ENST00000544872 PNISRQ8TF01 805 aaKnown RBP12.45□□□□□ -0.42
CIT-216ENST00000544872 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
CIT-216ENST00000544872 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
CIT-216ENST00000544872 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
CIT-216ENST00000544872 CCER2I3L3R5 266 aa12.44□□□□□ -0.42
CIT-216ENST00000544872 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
CIT-216ENST00000544872 PIGBQ92521 554 aa12.44□□□□□ -0.42
CIT-216ENST00000544872 SLC52A2Q9HAB3 445 aa12.44□□□□□ -0.42
CIT-216ENST00000544872 COL3A1P02461 1466 aaPredicted RBP12.43□□□□□ -0.42
CIT-216ENST00000544872 AOC2O75106 756 aa12.43□□□□□ -0.42
CIT-216ENST00000544872 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
CIT-216ENST00000544872 TRAPPC3LQ5T215 181 aa12.43□□□□□ -0.42
CIT-216ENST00000544872 NPM2Q86SE8 214 aaKnown RBP12.43□□□□□ -0.42
CIT-216ENST00000544872 CCDC146Q8IYE0 955 aa12.43□□□□□ -0.42
CIT-216ENST00000544872 RBM42Q9BTD8 480 aaKnown RBP12.43□□□□□ -0.42
CIT-216ENST00000544872 MAP2K2P36507 400 aa12.42□□□□□ -0.42
CIT-216ENST00000544872 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
CIT-216ENST00000544872 NGEFQ8N5V2 710 aa12.42□□□□□ -0.42
CIT-216ENST00000544872 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
CIT-216ENST00000544872 PLEKHF1Q96S99 279 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms