RNA–Protein interactions for RNA: ENST00000544539.5

PHC1-213, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-213ENST00000544539 NPC1L1Q9UHC9 1359 aa18.8■□□□□ 0.6
PHC1-213ENST00000544539 U2SURPO15042 1029 aaKnown RBP18.79■□□□□ 0.6
PHC1-213ENST00000544539 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
PHC1-213ENST00000544539 KCNA3P22001 575 aa18.79■□□□□ 0.6
PHC1-213ENST00000544539 DDR1Q08345 913 aa18.79■□□□□ 0.6
PHC1-213ENST00000544539 SLC39A6Q13433 755 aa18.79■□□□□ 0.6
PHC1-213ENST00000544539 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
PHC1-213ENST00000544539 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
PHC1-213ENST00000544539 COL15A1P39059 1388 aa18.79■□□□□ 0.6
PHC1-213ENST00000544539 ARFGEF1Q9Y6D6 1849 aa18.77■□□□□ 0.6
PHC1-213ENST00000544539 GNAT3A8MTJ3 354 aa18.77■□□□□ 0.6
PHC1-213ENST00000544539 PDZRN3Q9UPQ7 1066 aa18.77■□□□□ 0.6
PHC1-213ENST00000544539 ZC3H4Q9UPT8 1303 aaKnown RBP18.76■□□□□ 0.59
PHC1-213ENST00000544539 RNF181Q9P0P0 153 aa18.76■□□□□ 0.59
PHC1-213ENST00000544539 BRCA1P38398 1863 aaKnown RBP18.75■□□□□ 0.59
PHC1-213ENST00000544539 CANXP27824 592 aaKnown RBP18.75■□□□□ 0.59
PHC1-213ENST00000544539 RBM46Q8TBY0 533 aaKnown RBP18.75■□□□□ 0.59
PHC1-213ENST00000544539 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
PHC1-213ENST00000544539 ZBTB1Q9Y2K1 713 aa18.75■□□□□ 0.59
PHC1-213ENST00000544539 H0YIN7 160 aa18.74■□□□□ 0.59
PHC1-213ENST00000544539 SERPINB2P05120 415 aa18.74■□□□□ 0.59
PHC1-213ENST00000544539 CHRNA5P30532 468 aa18.74■□□□□ 0.59
PHC1-213ENST00000544539 NFIXQ14938 502 aa18.74■□□□□ 0.59
PHC1-213ENST00000544539 FSTL1Q12841 308 aa18.73■□□□□ 0.59
PHC1-213ENST00000544539 IFFO2Q5TF58 517 aa18.73■□□□□ 0.59
PHC1-213ENST00000544539 TTLL6Q8N841 843 aa18.73■□□□□ 0.59
PHC1-213ENST00000544539 FMNL2Q96PY5 1086 aa18.73■□□□□ 0.59
PHC1-213ENST00000544539 KCPQ6ZWJ8 1503 aa18.73■□□□□ 0.59
PHC1-213ENST00000544539 NPHP1O15259 732 aa18.72■□□□□ 0.59
PHC1-213ENST00000544539 ZNF790Q6PG37 636 aa18.72■□□□□ 0.59
PHC1-213ENST00000544539 NMRK2Q9NPI5 230 aa18.72■□□□□ 0.59
PHC1-213ENST00000544539 ADAMTS7Q9UKP4 1686 aa18.72■□□□□ 0.59
PHC1-213ENST00000544539 EIF5P55010 431 aaKnown RBP18.71■□□□□ 0.59
PHC1-213ENST00000544539 CNGB1Q14028 1251 aaPredicted RBP18.71■□□□□ 0.59
PHC1-213ENST00000544539 CEP350Q5VT06 3117 aa18.71■□□□□ 0.59
PHC1-213ENST00000544539 VIRMAQ69YN4 1812 aaKnown RBP18.7■□□□□ 0.58
PHC1-213ENST00000544539 LMNB1P20700 586 aa18.7■□□□□ 0.58
PHC1-213ENST00000544539 PDE6BP35913 854 aa18.7■□□□□ 0.58
PHC1-213ENST00000544539 IL6STP40189 918 aaPredicted RBP18.7■□□□□ 0.58
PHC1-213ENST00000544539 C2CD5Q86YS7 1000 aa18.7■□□□□ 0.58
PHC1-213ENST00000544539 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
PHC1-213ENST00000544539 HEG1Q9ULI3 1381 aa18.69■□□□□ 0.58
PHC1-213ENST00000544539 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
PHC1-213ENST00000544539 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
PHC1-213ENST00000544539 BICDL1Q6ZP65 573 aa18.68■□□□□ 0.58
PHC1-213ENST00000544539 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
PHC1-213ENST00000544539 ZNF496Q96IT1 587 aaPredicted RBP18.68■□□□□ 0.58
PHC1-213ENST00000544539 NEFMP07197 916 aa18.67■□□□□ 0.58
PHC1-213ENST00000544539 SETDB2Q96T68 719 aa18.67■□□□□ 0.58
PHC1-213ENST00000544539 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
PHC1-213ENST00000544539 UBR2Q8IWV8 1755 aa18.67■□□□□ 0.58
PHC1-213ENST00000544539 CARMIL3Q8ND23 1372 aa18.67■□□□□ 0.58
PHC1-213ENST00000544539 SMC1BQ8NDV3 1235 aa18.66■□□□□ 0.58
PHC1-213ENST00000544539 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
PHC1-213ENST00000544539 RRAGCQ9HB90 399 aa18.66■□□□□ 0.58
PHC1-213ENST00000544539 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
PHC1-213ENST00000544539 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
PHC1-213ENST00000544539 ST5P78524 1137 aa18.65■□□□□ 0.58
PHC1-213ENST00000544539 DPY19L2Q6NUT2 758 aa18.65■□□□□ 0.58
PHC1-213ENST00000544539 ZNF622Q969S3 477 aaKnown RBP eCLIP18.65■□□□□ 0.58
PHC1-213ENST00000544539 ZNF652Q9Y2D9 606 aa18.65■□□□□ 0.58
PHC1-213ENST00000544539 NRXN2Q9P2S2 1712 aa18.65■□□□□ 0.58
PHC1-213ENST00000544539 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
PHC1-213ENST00000544539 TNRC6CQ9HCJ0 1690 aaKnown RBP18.64■□□□□ 0.57
PHC1-213ENST00000544539 GLTPD2A6NH11 291 aa18.64■□□□□ 0.57
PHC1-213ENST00000544539 VEGFAP15692 232 aaPredicted RBP18.64■□□□□ 0.57
PHC1-213ENST00000544539 SOGA3Q5TF21 947 aa18.64■□□□□ 0.57
PHC1-213ENST00000544539 CEMIPQ8WUJ3 1361 aa18.64■□□□□ 0.57
PHC1-213ENST00000544539 U2AF1L5P0DN76 240 aaPredicted RBP18.63■□□□□ 0.57
PHC1-213ENST00000544539 U2AF1Q01081 240 aaKnown RBP eCLIP18.63■□□□□ 0.57
PHC1-213ENST00000544539 TBC1D9BQ66K14 1250 aa18.63■□□□□ 0.57
PHC1-213ENST00000544539 CNBD1Q8NA66 436 aa18.63■□□□□ 0.57
PHC1-213ENST00000544539 CNKSR1Q969H4 720 aa18.63■□□□□ 0.57
PHC1-213ENST00000544539 TBC1D2BQ9UPU7 963 aa18.63■□□□□ 0.57
PHC1-213ENST00000544539 HTATSF1O43719 755 aaKnown RBP18.62■□□□□ 0.57
PHC1-213ENST00000544539 RASSF7Q02833 373 aa18.62■□□□□ 0.57
PHC1-213ENST00000544539 RSPH6AQ9H0K4 717 aa18.62■□□□□ 0.57
PHC1-213ENST00000544539 SBF1O95248 1867 aa18.61■□□□□ 0.57
PHC1-213ENST00000544539 DLEC1Q9Y238 1755 aa18.61■□□□□ 0.57
PHC1-213ENST00000544539 SNRPA1P09661 255 aaKnown RBP18.61■□□□□ 0.57
PHC1-213ENST00000544539 CLEC4GQ6UXB4 293 aa18.61■□□□□ 0.57
PHC1-213ENST00000544539 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
PHC1-213ENST00000544539 A1BGP04217 495 aa18.6■□□□□ 0.57
PHC1-213ENST00000544539 PRR5LQ6MZQ0 368 aa18.6■□□□□ 0.57
PHC1-213ENST00000544539 DNAJC5GQ8N7S2 189 aa18.6■□□□□ 0.57
PHC1-213ENST00000544539 RGL2O15211 777 aa18.59■□□□□ 0.57
PHC1-213ENST00000544539 STYK1Q6J9G0 422 aa18.59■□□□□ 0.57
PHC1-213ENST00000544539 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
PHC1-213ENST00000544539 KLRG1Q96E93 195 aa18.58■□□□□ 0.56
PHC1-213ENST00000544539 MASTLQ96GX5 879 aa18.58■□□□□ 0.56
PHC1-213ENST00000544539 SIPA1L3O60292 1781 aaPredicted RBP18.58■□□□□ 0.56
PHC1-213ENST00000544539 SCN7AQ01118 1682 aa18.57■□□□□ 0.56
PHC1-213ENST00000544539 C21orf2O43822 256 aa18.57■□□□□ 0.56
PHC1-213ENST00000544539 CAMTA2O94983 1202 aa18.57■□□□□ 0.56
PHC1-213ENST00000544539 PPP2R1AP30153 589 aa18.57■□□□□ 0.56
PHC1-213ENST00000544539 ERFEQ4G0M1 354 aa18.57■□□□□ 0.56
PHC1-213ENST00000544539 NBPF5PQ86XG9 351 aaPredicted RBP18.57■□□□□ 0.56
PHC1-213ENST00000544539 TAOK3Q9H2K8 898 aa18.57■□□□□ 0.56
PHC1-213ENST00000544539 PNNQ9H307 717 aaKnown RBP18.57■□□□□ 0.56
PHC1-213ENST00000544539 WDR90Q96KV7 1748 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms