RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 RABEP1Q15276 862 aa19.31■□□□□ 0.68
SNRNP70-203ENST00000544278 C9orf78Q9NZ63 289 aaPredicted RBP19.31■□□□□ 0.68
SNRNP70-203ENST00000544278 PXDNQ92626 1479 aa19.3■□□□□ 0.68
SNRNP70-203ENST00000544278 RBM27Q9P2N5 1060 aaKnown RBP19.3■□□□□ 0.68
SNRNP70-203ENST00000544278 DDX49Q9Y6V7 483 aaKnown RBP19.3■□□□□ 0.68
SNRNP70-203ENST00000544278 NWD1Q149M9 1564 aa19.3■□□□□ 0.68
SNRNP70-203ENST00000544278 NALCNQ8IZF0 1738 aa19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 CWC27Q6UX04 472 aaKnown RBP19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 ESYT1Q9BSJ8 1104 aa19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 RNMTO43148 476 aaKnown RBP19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 HSP90AA2PQ14568 343 aaPredicted RBP19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 PLEKHO1Q53GL0 409 aaPredicted RBP19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 FMN2Q9NZ56 1722 aa19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 CHMLP26374 656 aa19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 RHPN1Q8TCX5 695 aa19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 GBP4Q96PP9 640 aa19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
SNRNP70-203ENST00000544278 REC8O95072 547 aa19.28■□□□□ 0.68
SNRNP70-203ENST00000544278 BAG4O95429 457 aaKnown RBP19.28■□□□□ 0.68
SNRNP70-203ENST00000544278 GDPD2Q9HCC8 539 aa19.28■□□□□ 0.68
SNRNP70-203ENST00000544278 ARHGEF25Q86VW2 580 aa19.28■□□□□ 0.68
SNRNP70-203ENST00000544278 NFATC2IPQ8NCF5 419 aa19.28■□□□□ 0.68
SNRNP70-203ENST00000544278 KIF24Q5T7B8 1368 aa19.28■□□□□ 0.68
SNRNP70-203ENST00000544278 DDX11L8A8MPP1 907 aa19.27■□□□□ 0.68
SNRNP70-203ENST00000544278 BEND3Q5T5X7 828 aa19.27■□□□□ 0.68
SNRNP70-203ENST00000544278 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.68
SNRNP70-203ENST00000544278 PRPF40AO75400 957 aaKnown RBP19.27■□□□□ 0.67
SNRNP70-203ENST00000544278 CCDC8Q9H0W5 538 aaPredicted RBP19.26■□□□□ 0.67
SNRNP70-203ENST00000544278 HTATSF1O43719 755 aaKnown RBP19.26■□□□□ 0.67
SNRNP70-203ENST00000544278 ST18O60284 1047 aa19.26■□□□□ 0.67
SNRNP70-203ENST00000544278 CAVIN1Q6NZI2 390 aaKnown RBP19.26■□□□□ 0.67
SNRNP70-203ENST00000544278 IBTKQ9P2D0 1353 aaPredicted RBP19.26■□□□□ 0.67
SNRNP70-203ENST00000544278 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
SNRNP70-203ENST00000544278 TULP1O00294 542 aaPredicted RBP19.25■□□□□ 0.67
SNRNP70-203ENST00000544278 AKAP4Q5JQC9 854 aa19.25■□□□□ 0.67
SNRNP70-203ENST00000544278 TMX3Q96JJ7 454 aa19.25■□□□□ 0.67
SNRNP70-203ENST00000544278 COL9A3Q14050 684 aaPredicted RBP19.24■□□□□ 0.67
SNRNP70-203ENST00000544278 KCNH5Q8NCM2 988 aa19.24■□□□□ 0.67
SNRNP70-203ENST00000544278 NSFL1CQ9UNZ2 370 aaKnown RBP19.24■□□□□ 0.67
SNRNP70-203ENST00000544278 ZDHHC9Q9Y397 364 aa19.24■□□□□ 0.67
SNRNP70-203ENST00000544278 ADCY9O60503 1353 aa19.24■□□□□ 0.67
SNRNP70-203ENST00000544278 GIGYF1O75420 1035 aaPredicted RBP19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 CHGBP05060 677 aa19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 EDC3Q96F86 508 aaKnown RBP19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 SALL3Q9BXA9 1300 aa19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 ATP5J2-PTCD1G3V325 749 aa19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 PTCD1O75127 700 aaKnown RBP19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 GRPEL1Q9HAV7 217 aa19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 SSH3Q8TE77 659 aa19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
SNRNP70-203ENST00000544278 ANKARQ7Z5J8 1434 aa19.22■□□□□ 0.67
SNRNP70-203ENST00000544278 TCEANC2Q96MN5 208 aa19.22■□□□□ 0.67
SNRNP70-203ENST00000544278 TLR7Q9NYK1 1049 aaKnown RBP19.22■□□□□ 0.67
SNRNP70-203ENST00000544278 L1TD1Q5T7N2 865 aaKnown RBP19.21■□□□□ 0.67
SNRNP70-203ENST00000544278 RAPGEF4Q8WZA2 1011 aa19.21■□□□□ 0.67
SNRNP70-203ENST00000544278 SUCLG2Q96I99 432 aa19.21■□□□□ 0.67
SNRNP70-203ENST00000544278 USP16Q9Y5T5 823 aa19.21■□□□□ 0.67
SNRNP70-203ENST00000544278 RIC3Q7Z5B4 369 aa19.21■□□□□ 0.67
SNRNP70-203ENST00000544278 RASEFQ8IZ41 740 aa19.21■□□□□ 0.67
SNRNP70-203ENST00000544278 XRN1Q8IZH2 1706 aaKnown RBP19.2■□□□□ 0.66
SNRNP70-203ENST00000544278 CEMIPQ8WUJ3 1361 aa19.2■□□□□ 0.66
SNRNP70-203ENST00000544278 FSD2A1L4K1 749 aa19.2■□□□□ 0.66
SNRNP70-203ENST00000544278 DBF4Q9UBU7 674 aaPredicted RBP19.2■□□□□ 0.66
SNRNP70-203ENST00000544278 LTN1O94822 1766 aa19.19■□□□□ 0.66
SNRNP70-203ENST00000544278 BICC1Q9H694 974 aaKnown RBP19.19■□□□□ 0.66
SNRNP70-203ENST00000544278 AACSQ86V21 672 aa19.19■□□□□ 0.66
SNRNP70-203ENST00000544278 PI4K2BQ8TCG2 481 aa19.19■□□□□ 0.66
SNRNP70-203ENST00000544278 ZNF496Q96IT1 587 aaPredicted RBP19.19■□□□□ 0.66
SNRNP70-203ENST00000544278 OSBPL3Q9H4L5 887 aa19.19■□□□□ 0.66
SNRNP70-203ENST00000544278 CIZ1Q9ULV3 898 aaPredicted RBP19.19■□□□□ 0.66
SNRNP70-203ENST00000544278 COPS6Q7L5N1 327 aa19.18■□□□□ 0.66
SNRNP70-203ENST00000544278 XAGE3Q8WTP9 111 aa19.18■□□□□ 0.66
SNRNP70-203ENST00000544278 MYD88Q99836 296 aa19.18■□□□□ 0.66
SNRNP70-203ENST00000544278 MPNDQ8N594 471 aa19.18■□□□□ 0.66
SNRNP70-203ENST00000544278 BOLA2Q9H3K6 86 aa19.18■□□□□ 0.66
SNRNP70-203ENST00000544278 MARF1Q9Y4F3 1742 aaKnown RBP19.18■□□□□ 0.66
SNRNP70-203ENST00000544278 ATF3P18847 181 aa19.17■□□□□ 0.66
SNRNP70-203ENST00000544278 EPHA10Q5JZY3 1008 aa19.17■□□□□ 0.66
SNRNP70-203ENST00000544278 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
SNRNP70-203ENST00000544278 GOLGA6L22H0YM25 854 aa19.17■□□□□ 0.66
SNRNP70-203ENST00000544278 CHMP3Q9Y3E7 222 aa19.17■□□□□ 0.66
SNRNP70-203ENST00000544278 PTH1RQ03431 593 aa19.16■□□□□ 0.66
SNRNP70-203ENST00000544278 KIF1BPQ96EK5 621 aa19.16■□□□□ 0.66
SNRNP70-203ENST00000544278 DNAJC5Q9H3Z4 198 aa19.16■□□□□ 0.66
SNRNP70-203ENST00000544278 KAZALD1Q96I82 304 aa19.16■□□□□ 0.66
SNRNP70-203ENST00000544278 NPHP4O75161 1426 aaPredicted RBP19.16■□□□□ 0.66
SNRNP70-203ENST00000544278 RNF214Q8ND24 703 aa19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 KAT6BQ8WYB5 2073 aa19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 ERBB3P21860 1342 aa19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 FAM227BQ96M60 508 aa19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 IFIT2P09913 472 aaKnown RBP19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 POLA2Q14181 598 aa19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 SLFNL1Q499Z3 407 aa19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 KSR2Q6VAB6 950 aa19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 CCDC85AQ96PX6 553 aaPredicted RBP19.15■□□□□ 0.66
SNRNP70-203ENST00000544278 ZNF790Q6PG37 636 aa19.14■□□□□ 0.66
SNRNP70-203ENST00000544278 A0A0U1RQG5 324 aaPredicted RBP19.14■□□□□ 0.65
SNRNP70-203ENST00000544278 IGKV5-2P06315 115 aa19.14■□□□□ 0.65
SNRNP70-203ENST00000544278 CLASRPQ8N2M8 674 aaKnown RBP19.14■□□□□ 0.65
SNRNP70-203ENST00000544278 MCCP23508 829 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms