RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 CYP27B1O15528 508 aa13.07□□□□□ -0.32
LDHC-208ENST00000544105 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
LDHC-208ENST00000544105 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
LDHC-208ENST00000544105 PARP4Q9UKK3 1724 aaKnown RBP13.06□□□□□ -0.32
LDHC-208ENST00000544105 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
LDHC-208ENST00000544105 EIF2S2P20042 333 aaKnown RBP13.06□□□□□ -0.32
LDHC-208ENST00000544105 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
LDHC-208ENST00000544105 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
LDHC-208ENST00000544105 ABCC4O15439 1325 aa13.06□□□□□ -0.32
LDHC-208ENST00000544105 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
LDHC-208ENST00000544105 EXOC5O00471 708 aa13.05□□□□□ -0.32
LDHC-208ENST00000544105 SEC24BO95487 1268 aa13.05□□□□□ -0.32
LDHC-208ENST00000544105 TIE1P35590 1138 aa13.05□□□□□ -0.32
LDHC-208ENST00000544105 CCT4P50991 539 aaKnown RBP13.05□□□□□ -0.32
LDHC-208ENST00000544105 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
LDHC-208ENST00000544105 NECTIN2Q92692 538 aa13.05□□□□□ -0.32
LDHC-208ENST00000544105 THRAP3Q9Y2W1 955 aaKnown RBP13.05□□□□□ -0.32
LDHC-208ENST00000544105 JCADQ9P266 1359 aa13.05□□□□□ -0.32
LDHC-208ENST00000544105 FKBP5Q13451 457 aaPredicted RBP13.04□□□□□ -0.32
LDHC-208ENST00000544105 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
LDHC-208ENST00000544105 INTS3Q68E01 1043 aaKnown RBP13.04□□□□□ -0.32
LDHC-208ENST00000544105 ZBTB40Q9NUA8 1239 aa13.04□□□□□ -0.32
LDHC-208ENST00000544105 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
LDHC-208ENST00000544105 PCDHB13Q9Y5F0 798 aa13.04□□□□□ -0.32
LDHC-208ENST00000544105 KDM2BQ8NHM5 1336 aa13.04□□□□□ -0.32
LDHC-208ENST00000544105 PKD1L3Q7Z443 1732 aa13.03□□□□□ -0.32
LDHC-208ENST00000544105 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
LDHC-208ENST00000544105 KCNQ3O43525 872 aa13.03□□□□□ -0.32
LDHC-208ENST00000544105 GIGYF1O75420 1035 aaPredicted RBP13.03□□□□□ -0.32
LDHC-208ENST00000544105 FLIIQ13045 1269 aa13.03□□□□□ -0.32
LDHC-208ENST00000544105 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
LDHC-208ENST00000544105 CCDC9Q9Y3X0 531 aaKnown RBP13.03□□□□□ -0.32
LDHC-208ENST00000544105 POTEMA6NI47 508 aa13.02□□□□□ -0.33
LDHC-208ENST00000544105 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.33
LDHC-208ENST00000544105 SLC4A10Q6U841 1118 aa13.02□□□□□ -0.33
LDHC-208ENST00000544105 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
LDHC-208ENST00000544105 NGLY1Q96IV0 654 aa13.02□□□□□ -0.33
LDHC-208ENST00000544105 HYPKQ9NX55 129 aa13.02□□□□□ -0.33
LDHC-208ENST00000544105 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
LDHC-208ENST00000544105 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
LDHC-208ENST00000544105 IGHDP01880 384 aa13.01□□□□□ -0.33
LDHC-208ENST00000544105 HDAC1Q13547 482 aaPredicted RBP13.01□□□□□ -0.33
LDHC-208ENST00000544105 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
LDHC-208ENST00000544105 SPATA31A6Q5VVP1 1343 aa13.01□□□□□ -0.33
LDHC-208ENST00000544105 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
LDHC-208ENST00000544105 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
LDHC-208ENST00000544105 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
LDHC-208ENST00000544105 DDX58O95786 925 aaKnown RBP13□□□□□ -0.33
LDHC-208ENST00000544105 SLC39A6Q13433 755 aa13□□□□□ -0.33
LDHC-208ENST00000544105 G2E3Q7L622 706 aa13□□□□□ -0.33
LDHC-208ENST00000544105 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
LDHC-208ENST00000544105 CHPF2Q9P2E5 772 aa13□□□□□ -0.33
LDHC-208ENST00000544105 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
LDHC-208ENST00000544105 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
LDHC-208ENST00000544105 HDAC5Q9UQL6 1122 aa12.99□□□□□ -0.33
LDHC-208ENST00000544105 MRC1P22897 1456 aa12.98□□□□□ -0.33
LDHC-208ENST00000544105 GNAI3P08754 354 aa12.98□□□□□ -0.33
LDHC-208ENST00000544105 MEX3CQ5U5Q3 659 aaKnown RBP12.98□□□□□ -0.33
LDHC-208ENST00000544105 POTEGQ6S5H5 508 aa12.98□□□□□ -0.33
LDHC-208ENST00000544105 UNC5CLQ8IV45 518 aa12.98□□□□□ -0.33
LDHC-208ENST00000544105 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
LDHC-208ENST00000544105 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
LDHC-208ENST00000544105 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
LDHC-208ENST00000544105 SPATA31A5Q5VU36 1347 aa12.97□□□□□ -0.33
LDHC-208ENST00000544105 SPATA31A7Q8IWB4 1347 aa12.97□□□□□ -0.33
LDHC-208ENST00000544105 DDB1Q16531 1140 aa12.97□□□□□ -0.33
LDHC-208ENST00000544105 BARGINQ6ZT62 677 aa12.97□□□□□ -0.33
LDHC-208ENST00000544105 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
LDHC-208ENST00000544105 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
LDHC-208ENST00000544105 TSHZ2Q9NRE2 1034 aa12.97□□□□□ -0.33
LDHC-208ENST00000544105 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
LDHC-208ENST00000544105 SIPA1L3O60292 1781 aaPredicted RBP12.97□□□□□ -0.33
LDHC-208ENST00000544105 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.33
LDHC-208ENST00000544105 F6X3S4 739 aa12.96□□□□□ -0.33
LDHC-208ENST00000544105 GCC1Q96CN9 775 aa12.96□□□□□ -0.33
LDHC-208ENST00000544105 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
LDHC-208ENST00000544105 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
LDHC-208ENST00000544105 SRCIN1Q9C0H9 1055 aa12.96□□□□□ -0.33
LDHC-208ENST00000544105 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.33
LDHC-208ENST00000544105 HMMRO75330 724 aa12.95□□□□□ -0.34
LDHC-208ENST00000544105 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
LDHC-208ENST00000544105 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
LDHC-208ENST00000544105 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
LDHC-208ENST00000544105 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
LDHC-208ENST00000544105 DISP2A7MBM2 1401 aa12.95□□□□□ -0.34
LDHC-208ENST00000544105 RGS12O14924 1447 aa12.95□□□□□ -0.34
LDHC-208ENST00000544105 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
LDHC-208ENST00000544105 SLIT2O94813 1529 aa12.94□□□□□ -0.34
LDHC-208ENST00000544105 NWD2Q9ULI1 1742 aa12.94□□□□□ -0.34
LDHC-208ENST00000544105 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
LDHC-208ENST00000544105 GNAI2P04899 355 aa12.94□□□□□ -0.34
LDHC-208ENST00000544105 NUBP1P53384 320 aa12.94□□□□□ -0.34
LDHC-208ENST00000544105 VPS72Q15906 364 aa12.94□□□□□ -0.34
LDHC-208ENST00000544105 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
LDHC-208ENST00000544105 PXDNLA1KZ92 1463 aa12.93□□□□□ -0.34
LDHC-208ENST00000544105 RGS3P49796 1198 aa12.93□□□□□ -0.34
LDHC-208ENST00000544105 NEXNQ0ZGT2 675 aa12.93□□□□□ -0.34
LDHC-208ENST00000544105 RIC3Q7Z5B4 369 aa12.93□□□□□ -0.34
LDHC-208ENST00000544105 FNBP4Q8N3X1 1017 aaPredicted RBP12.93□□□□□ -0.34
LDHC-208ENST00000544105 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms