RNA–Protein interactions for RNA: ENST00000543997.1

NPIPB5-223, Transcript of nuclear pore complex interacting protein family member B5, human

TSL 4

Gene NPIPB5, Length 573 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB5-223	ENST00000543997	KDM2A	Q9Y2K7	1162 aa		7.05	□□□□□ -1.28
NPIPB5-223	ENST00000543997	C5	P01031	1676 aa		7.05	□□□□□ -1.28
NPIPB5-223	ENST00000543997	KCP	Q6ZWJ8	1503 aa		7.05	□□□□□ -1.28
NPIPB5-223	ENST00000543997	USP31	Q70CQ4	1352 aa		7.05	□□□□□ -1.28
NPIPB5-223	ENST00000543997	TOGARAM1	Q9Y4F4	1720 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	KDM2B	Q8NHM5	1336 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	NSD3	Q9BZ95	1437 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	TK2	O00142	265 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	TGFB2	P61812	414 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	C9orf131	Q5VYM1	1079 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	AMIGO3	Q86WK7	504 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	ANKRD24	Q8TF21	1146 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	MFRP	Q9BY79	579 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	KIF13B	Q9NQT8	1826 aa		7.04	□□□□□ -1.28
NPIPB5-223	ENST00000543997	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.03	□□□□□ -1.28
NPIPB5-223	ENST00000543997	TNRC6C	Q9HCJ0	1690 aa	Known RBP	7.03	□□□□□ -1.28
NPIPB5-223	ENST00000543997	SSFA2	P28290	1259 aa		7.03	□□□□□ -1.28
NPIPB5-223	ENST00000543997	KAT6B	Q8WYB5	2073 aa		7.03	□□□□□ -1.28
NPIPB5-223	ENST00000543997	KIAA1210	Q9ULL0	1709 aa		7.03	□□□□□ -1.28
NPIPB5-223	ENST00000543997	C4B	P0C0L5	1744 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	PKD1L3	Q7Z443	1732 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	RGS19	P49795	217 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	ARHGAP27	Q6ZUM4	889 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	TMC2	Q8TDI7	906 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	RRAGC	Q9HB90	399 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	BCS1L	Q9Y276	419 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	STK24	Q9Y6E0	443 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	PALLD	Q8WX93	1383 aa		7.02	□□□□□ -1.29
NPIPB5-223	ENST00000543997	ZC3H4	Q9UPT8	1303 aa	Known RBP	7.01	□□□□□ -1.29
NPIPB5-223	ENST00000543997	TAF1L	Q8IZX4	1826 aa		7.01	□□□□□ -1.29
NPIPB5-223	ENST00000543997	UBR3	Q6ZT12	1888 aa		7.01	□□□□□ -1.29
NPIPB5-223	ENST00000543997	FAM208A	Q9UK61	1670 aa	Known RBP	7.01	□□□□□ -1.29
NPIPB5-223	ENST00000543997	FOXN1	O15353	648 aa		7.01	□□□□□ -1.29
NPIPB5-223	ENST00000543997	AK7	Q96M32	723 aa		7.01	□□□□□ -1.29
NPIPB5-223	ENST00000543997	MMP10	P09238	476 aa		7	□□□□□ -1.29
NPIPB5-223	ENST00000543997	ZCRB1	Q8TBF4	217 aa	Known RBP	7	□□□□□ -1.29
NPIPB5-223	ENST00000543997	DCAF5	Q96JK2	942 aa		7	□□□□□ -1.29
NPIPB5-223	ENST00000543997	MEGF6	O75095	1541 aa		7	□□□□□ -1.29
NPIPB5-223	ENST00000543997	KDM6A	O15550	1401 aa	Predicted RBP	7	□□□□□ -1.29
NPIPB5-223	ENST00000543997	KTN1	Q86UP2	1357 aa	Known RBP	6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	BRCA1	P38398	1863 aa	Known RBP	6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997		A0A0G2JLW4	131 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	HR	O43593	1189 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	FCHSD2	O94868	740 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	PHF14	O94880	888 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	KCNA3	P22001	575 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	CTCF	P49711	727 aa	Predicted RBP	6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	MLLT1	Q03111	559 aa	Predicted RBP	6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	NBPF1	Q3BBV0	1214 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	IP6K1	Q92551	441 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	ABHD8	Q96I13	439 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	RNF181	Q9P0P0	153 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	ARFGEF1	Q9Y6D6	1849 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	CGNL1	Q0VF96	1302 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	EVC2	Q86UK5	1308 aa		6.99	□□□□□ -1.29
NPIPB5-223	ENST00000543997	SBNO2	Q9Y2G9	1366 aa		6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	LTN1	O94822	1766 aa		6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	STK25	O00506	426 aa		6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	VEGFA	P15692	232 aa	Predicted RBP	6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	DPEP1	P16444	411 aa		6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	SMIM5	Q71RC9	77 aa		6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	SMARCC1	Q92922	1105 aa	Predicted RBP	6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	MON2	Q7Z3U7	1717 aa		6.98	□□□□□ -1.29
NPIPB5-223	ENST00000543997	CNTNAP1	P78357	1384 aa		6.97	□□□□□ -1.29
NPIPB5-223	ENST00000543997	TNRC18	O15417	2968 aa	Predicted RBP	6.97	□□□□□ -1.29
NPIPB5-223	ENST00000543997	GLTPD2	A6NH11	291 aa		6.97	□□□□□ -1.29
NPIPB5-223	ENST00000543997	RGS20	O76081	388 aa		6.97	□□□□□ -1.29
NPIPB5-223	ENST00000543997	WBP1L	Q9NX94	342 aa		6.97	□□□□□ -1.29
NPIPB5-223	ENST00000543997	NME9	Q86XW9	330 aa		6.96	□□□□□ -1.3
NPIPB5-223	ENST00000543997	NLGN1	Q8N2Q7	840 aa		6.96	□□□□□ -1.3
NPIPB5-223	ENST00000543997	LINC00116	Q8NCU8	138 aa		6.96	□□□□□ -1.3
NPIPB5-223	ENST00000543997	PTCD2	Q8WV60	388 aa	Known RBP	6.96	□□□□□ -1.3
NPIPB5-223	ENST00000543997	CCDC87	Q9NVE4	849 aa		6.96	□□□□□ -1.3
NPIPB5-223	ENST00000543997	CD163L1	Q9NR16	1453 aa		6.96	□□□□□ -1.3
NPIPB5-223	ENST00000543997	MAP2	P11137	1827 aa	Known RBP	6.96	□□□□□ -1.3
NPIPB5-223	ENST00000543997	C4A	P0C0L4	1744 aa		6.96	□□□□□ -1.3
NPIPB5-223	ENST00000543997	POTEC	B2RU33	542 aa		6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	GNPAT	O15228	680 aa		6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	LBX1	P52954	281 aa		6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	TMF1	P82094	1093 aa		6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	DALRD3	Q5D0E6	543 aa	Known RBP	6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	AIDA	Q96BJ3	306 aa		6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	PIM2	Q9P1W9	311 aa		6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	MKRN1	Q9UHC7	482 aa	Known RBP	6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	PCDH11X	Q9BZA7	1347 aa		6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	PCDH11Y	Q9BZA8	1340 aa		6.95	□□□□□ -1.3
NPIPB5-223	ENST00000543997	EDC4	Q6P2E9	1401 aa	Known RBP	6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	PDE4DIP	Q5VU43	2346 aa		6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	LOC102724428	A0A0B4J2F2	783 aa		6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	HSPA8	P11142	646 aa	Known RBP	6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	HOXC9	P31274	260 aa		6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	SIK1	P57059	783 aa		6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	PPP4R3B	Q5MIZ7	849 aa		6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	DMRTA1	Q5VZB9	504 aa		6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	MPRIP	Q6WCQ1	1025 aa		6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	KCTD12	Q96CX2	325 aa	Known RBP	6.94	□□□□□ -1.3
NPIPB5-223	ENST00000543997	MAP3K19	Q56UN5	1328 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms