RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 KDM2BQ8NHM5 1336 aa15.39■□□□□ 0.05
TUBGCP2-210ENST00000543663 DHX16O60231 1041 aaKnown RBP15.39■□□□□ 0.05
TUBGCP2-210ENST00000543663 MX1P20591 662 aa15.39■□□□□ 0.05
TUBGCP2-210ENST00000543663 KRT85P78386 507 aa15.39■□□□□ 0.05
TUBGCP2-210ENST00000543663 TAF7Q15545 349 aaPredicted RBP15.39■□□□□ 0.05
TUBGCP2-210ENST00000543663 BLOC1S2Q6QNY1 142 aa15.39■□□□□ 0.05
TUBGCP2-210ENST00000543663 LRRFIP2Q9Y608 721 aaKnown RBP15.39■□□□□ 0.05
TUBGCP2-210ENST00000543663 BTBD11A6QL63 1104 aa15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 STK38Q15208 465 aa15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 DDX17Q92841 729 aaKnown RBP15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 EYA1Q99502 592 aa15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 PDRG1Q9NUG6 133 aa15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 ZBTB9Q96C00 473 aa15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 CCDC8Q9H0W5 538 aaPredicted RBP15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 CAMSAP1Q5T5Y3 1602 aa15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 FKBP4Q02790 459 aaKnown RBP eCLIP15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 DIP2CQ9Y2E4 1556 aa15.38■□□□□ 0.05
TUBGCP2-210ENST00000543663 MROH1Q8NDA8 1641 aa15.37■□□□□ 0.05
TUBGCP2-210ENST00000543663 ZC3H13Q5T200 1668 aaKnown RBP15.37■□□□□ 0.05
TUBGCP2-210ENST00000543663 PDCP20941 246 aa15.37■□□□□ 0.05
TUBGCP2-210ENST00000543663 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
TUBGCP2-210ENST00000543663 TRMT2AQ8IZ69 625 aaKnown RBP15.37■□□□□ 0.05
TUBGCP2-210ENST00000543663 SPATA32Q96LK8 384 aa15.37■□□□□ 0.05
TUBGCP2-210ENST00000543663 PATL2C9JE40 543 aaKnown RBP15.37■□□□□ 0.05
TUBGCP2-210ENST00000543663 SLC39A6Q13433 755 aa15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 MRPL50Q8N5N7 158 aaKnown RBP15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 METP08581 1390 aa15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 TPM1P09493 284 aa15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 RRP9O43818 475 aaKnown RBP15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 FLIIQ13045 1269 aa15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 VPS37DQ86XT2 251 aa15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 IL13P35225 146 aa15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 ALDH1L2Q3SY69 923 aa15.36■□□□□ 0.05
TUBGCP2-210ENST00000543663 PLEKHO1Q53GL0 409 aaPredicted RBP15.35■□□□□ 0.05
TUBGCP2-210ENST00000543663 ZBTB40Q9NUA8 1239 aa15.35■□□□□ 0.05
TUBGCP2-210ENST00000543663 GLI2P10070 1586 aa15.35■□□□□ 0.05
TUBGCP2-210ENST00000543663 HCLS1P14317 486 aaPredicted RBP15.35■□□□□ 0.05
TUBGCP2-210ENST00000543663 HMGN5P82970 282 aaKnown RBP15.35■□□□□ 0.05
TUBGCP2-210ENST00000543663 SIRT1Q96EB6 747 aa15.35■□□□□ 0.05
TUBGCP2-210ENST00000543663 HSPA2P54652 639 aa15.35■□□□□ 0.05
TUBGCP2-210ENST00000543663 CCDC112Q8NEF3 446 aa15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 ZHX1Q9UKY1 873 aaPredicted RBP15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 ERICH4A6NGS2 130 aa15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 BMP2KLQ5H9B9 411 aa15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 ZGPATQ8N5A5 531 aaKnown RBP15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 RRAGDQ9NQL2 400 aaPredicted RBP15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 PI4KAP1Q8N8J0 262 aa15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 MAP7D2Q96T17 732 aa15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 TRMT1Q9NXH9 659 aaKnown RBP15.34■□□□□ 0.05
TUBGCP2-210ENST00000543663 SDSP20132 328 aa15.33■□□□□ 0.05
TUBGCP2-210ENST00000543663 CCDC82Q8N4S0 544 aa15.33■□□□□ 0.05
TUBGCP2-210ENST00000543663 TRERF1Q96PN7 1200 aa15.33■□□□□ 0.05
TUBGCP2-210ENST00000543663 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
TUBGCP2-210ENST00000543663 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
TUBGCP2-210ENST00000543663 IPO7O95373 1038 aaKnown RBP15.33■□□□□ 0.04
TUBGCP2-210ENST00000543663 SAFBQ15424 915 aaKnown RBP eCLIP15.33■□□□□ 0.04
TUBGCP2-210ENST00000543663 C16orf45Q96MC5 204 aaPredicted RBP15.33■□□□□ 0.04
TUBGCP2-210ENST00000543663 SERPINC1P01008 464 aa15.32■□□□□ 0.04
TUBGCP2-210ENST00000543663 GIMAP6Q6P9H5 292 aa15.32■□□□□ 0.04
TUBGCP2-210ENST00000543663 RAB11FIP4Q86YS3 637 aa15.32■□□□□ 0.04
TUBGCP2-210ENST00000543663 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
TUBGCP2-210ENST00000543663 RAB11FIP3O75154 756 aa15.32■□□□□ 0.04
TUBGCP2-210ENST00000543663 NAP1L1P55209 391 aaKnown RBP15.32■□□□□ 0.04
TUBGCP2-210ENST00000543663 TOM1L2Q6ZVM7 507 aa15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 NECAB1Q8N987 351 aa15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 IGSF3O75054 1194 aa15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 LRRFIP1Q32MZ4 808 aaKnown RBP15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 ZMYND15Q9H091 742 aa15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 FRMPD1Q5SYB0 1578 aa15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 NAT10Q9H0A0 1025 aaKnown RBP15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 PRDM11Q9NQV5 511 aa15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
TUBGCP2-210ENST00000543663 QRICH2Q9H0J4 1663 aa15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 G3V3G9 751 aa15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 ZSCAN23Q3MJ62 389 aa15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 DCAF8Q5TAQ9 597 aa15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 ERICH2A1L162 156 aa15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 PRIM1P49642 420 aaKnown RBP15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 OLFM4Q6UX06 510 aa15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 TTC12Q9H892 705 aaPredicted RBP15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 NUCB1Q02818 461 aa15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 TMX1Q9H3N1 280 aa15.3■□□□□ 0.04
TUBGCP2-210ENST00000543663 ZBTB7BO15156 539 aaPredicted RBP15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 ATP5J2-PTCD1G3V325 749 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 LETM1O95202 739 aaPredicted RBP15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 TMX3Q96JJ7 454 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 PLEKHF1Q96S99 279 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 CHPF2Q9P2E5 772 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 AGLP35573 1532 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 NEXMIFQ5QGS0 1516 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 TEX35Q5T0J7 233 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 PRR36Q9H6K5 1346 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 BIN1O00499 593 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 CCT2P78371 535 aaKnown RBP15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 GPS2Q13227 327 aa15.29■□□□□ 0.04
TUBGCP2-210ENST00000543663 MAP3K11Q16584 847 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms