RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 USPL1Q5W0Q7 1092 aa28.56■■■□□ 2.16
PSME3-204ENST00000543428 C10orf71Q711Q0 1435 aa28.56■■■□□ 2.16
PSME3-204ENST00000543428 TEX13AQ9BXU3 409 aaPredicted RBP28.56■■■□□ 2.16
PSME3-204ENST00000543428 HEG1Q9ULI3 1381 aa28.55■■■□□ 2.16
PSME3-204ENST00000543428 FMNL2Q96PY5 1086 aa28.55■■■□□ 2.16
PSME3-204ENST00000543428 PXDNLA1KZ92 1463 aa28.54■■■□□ 2.16
PSME3-204ENST00000543428 A0A0G2JLW4 131 aa28.54■■■□□ 2.16
PSME3-204ENST00000543428 N4BP2Q86UW6 1770 aaPredicted RBP28.53■■■□□ 2.16
PSME3-204ENST00000543428 MCM10Q7L590 875 aa28.53■■■□□ 2.16
PSME3-204ENST00000543428 DDR1Q08345 913 aa28.52■■■□□ 2.16
PSME3-204ENST00000543428 NARFQ9UHQ1 456 aa28.52■■■□□ 2.16
PSME3-204ENST00000543428 HTATSF1O43719 755 aaKnown RBP28.5■■■□□ 2.15
PSME3-204ENST00000543428 DDX10Q13206 875 aaKnown RBP28.5■■■□□ 2.15
PSME3-204ENST00000543428 A0A087WZG4 1122 aa28.49■■■□□ 2.15
PSME3-204ENST00000543428 DPEP1P16444 411 aa28.49■■■□□ 2.15
PSME3-204ENST00000543428 TM4SF1P30408 202 aa28.49■■■□□ 2.15
PSME3-204ENST00000543428 BCS1LQ9Y276 419 aa28.49■■■□□ 2.15
PSME3-204ENST00000543428 ZNF330Q9Y3S2 320 aaPredicted RBP28.49■■■□□ 2.15
PSME3-204ENST00000543428 POLRMTO00411 1230 aaKnown RBP28.48■■■□□ 2.15
PSME3-204ENST00000543428 KCNQ3O43525 872 aa28.48■■■□□ 2.15
PSME3-204ENST00000543428 DCTN1Q14203 1278 aa28.48■■■□□ 2.15
PSME3-204ENST00000543428 RALBP1Q15311 655 aa28.48■■■□□ 2.15
PSME3-204ENST00000543428 NPM2Q86SE8 214 aaKnown RBP28.48■■■□□ 2.15
PSME3-204ENST00000543428 KIAA1551Q9HCM1 1747 aa28.48■■■□□ 2.15
PSME3-204ENST00000543428 PNNQ9H307 717 aaKnown RBP28.47■■■□□ 2.15
PSME3-204ENST00000543428 EIF5P55010 431 aaKnown RBP28.46■■■□□ 2.15
PSME3-204ENST00000543428 NFIXQ14938 502 aa28.45■■■□□ 2.14
PSME3-204ENST00000543428 MAPK8IP3Q9UPT6 1336 aa28.43■■■□□ 2.14
PSME3-204ENST00000543428 A1BGP04217 495 aa28.43■■■□□ 2.14
PSME3-204ENST00000543428 IL6STP40189 918 aaPredicted RBP28.42■■■□□ 2.14
PSME3-204ENST00000543428 TAF7Q15545 349 aaPredicted RBP28.42■■■□□ 2.14
PSME3-204ENST00000543428 BCL2L12Q9HB09 334 aa28.42■■■□□ 2.14
PSME3-204ENST00000543428 PIM2Q9P1W9 311 aa28.42■■■□□ 2.14
PSME3-204ENST00000543428 SNRPA1P09661 255 aaKnown RBP28.41■■■□□ 2.14
PSME3-204ENST00000543428 BICDL1Q6ZP65 573 aa28.41■■■□□ 2.14
PSME3-204ENST00000543428 PLEKHF1Q96S99 279 aa28.41■■■□□ 2.14
PSME3-204ENST00000543428 TBC1D2BQ9UPU7 963 aa28.41■■■□□ 2.14
PSME3-204ENST00000543428 ATP10DQ9P241 1426 aa28.41■■■□□ 2.14
PSME3-204ENST00000543428 GIGYF1O75420 1035 aaPredicted RBP28.4■■■□□ 2.14
PSME3-204ENST00000543428 SERPINB2P05120 415 aa28.4■■■□□ 2.14
PSME3-204ENST00000543428 DLG5Q8TDM6 1919 aa28.39■■■□□ 2.14
PSME3-204ENST00000543428 KCNA3P22001 575 aa28.39■■■□□ 2.14
PSME3-204ENST00000543428 NFE2L2Q16236 605 aa28.39■■■□□ 2.14
PSME3-204ENST00000543428 ARHGAP27Q6ZUM4 889 aa28.39■■■□□ 2.14
PSME3-204ENST00000543428 USP16Q9Y5T5 823 aa28.39■■■□□ 2.14
PSME3-204ENST00000543428 BRCA1P38398 1863 aaKnown RBP28.38■■■□□ 2.13
PSME3-204ENST00000543428 CHRNA5P30532 468 aa28.38■■■□□ 2.13
PSME3-204ENST00000543428 DALRD3Q5D0E6 543 aaKnown RBP28.38■■■□□ 2.13
PSME3-204ENST00000543428 AFDNP55196 1824 aaKnown RBP28.38■■■□□ 2.13
PSME3-204ENST00000543428 PRAMEF22A3QJZ6 481 aa28.36■■■□□ 2.13
PSME3-204ENST00000543428 PNISRQ8TF01 805 aaKnown RBP28.36■■■□□ 2.13
PSME3-204ENST00000543428 MIS18AQ9NYP9 233 aa28.36■■■□□ 2.13
PSME3-204ENST00000543428 MYBBP1AQ9BQG0 1328 aaKnown RBP28.36■■■□□ 2.13
PSME3-204ENST00000543428 PIP4K2AP48426 406 aaPredicted RBP28.34■■■□□ 2.13
PSME3-204ENST00000543428 C1QTNF8P60827 252 aa28.34■■■□□ 2.13
PSME3-204ENST00000543428 TBC1D9BQ66K14 1250 aa28.34■■■□□ 2.13
PSME3-204ENST00000543428 DZIP3Q86Y13 1208 aaKnown RBP28.34■■■□□ 2.13
PSME3-204ENST00000543428 ZNF526Q8TF50 670 aaPredicted RBP28.34■■■□□ 2.13
PSME3-204ENST00000543428 GPBP1L1Q9HC44 474 aaPredicted RBP28.34■■■□□ 2.13
PSME3-204ENST00000543428 SCN7AQ01118 1682 aa28.34■■■□□ 2.13
PSME3-204ENST00000543428 ADCY9O60503 1353 aa28.34■■■□□ 2.13
PSME3-204ENST00000543428 NRXN2Q9P2S2 1712 aa28.32■■■□□ 2.12
PSME3-204ENST00000543428 ARFGEF1Q9Y6D6 1849 aa28.32■■■□□ 2.12
PSME3-204ENST00000543428 THUMPD2Q9BTF0 503 aaKnown RBP28.32■■■□□ 2.12
PSME3-204ENST00000543428 NPHP1O15259 732 aa28.3■■■□□ 2.12
PSME3-204ENST00000543428 CAMTA2O94983 1202 aa28.3■■■□□ 2.12
PSME3-204ENST00000543428 SETDB2Q96T68 719 aa28.3■■■□□ 2.12
PSME3-204ENST00000543428 CARMIL3Q8ND23 1372 aa28.29■■■□□ 2.12
PSME3-204ENST00000543428 C2CD5Q86YS7 1000 aa28.28■■■□□ 2.12
PSME3-204ENST00000543428 H0YIN7 160 aa28.27■■■□□ 2.12
PSME3-204ENST00000543428 RIPK4P57078 832 aa28.27■■■□□ 2.12
PSME3-204ENST00000543428 KDM3BQ7LBC6 1761 aa28.27■■■□□ 2.12
PSME3-204ENST00000543428 WDR43Q15061 677 aaKnown RBP eCLIP28.26■■■□□ 2.11
PSME3-204ENST00000543428 ZNF652Q9Y2D9 606 aa28.26■■■□□ 2.11
PSME3-204ENST00000543428 BCORQ6W2J9 1755 aa28.25■■■□□ 2.11
PSME3-204ENST00000543428 NBPF26B4DH59 902 aa28.25■■■□□ 2.11
PSME3-204ENST00000543428 NBPF10Q6P3W6 841 aaKnown RBP28.25■■■□□ 2.11
PSME3-204ENST00000543428 NBPF15Q8N660 670 aa28.25■■■□□ 2.11
PSME3-204ENST00000543428 LMOD3Q0VAK6 560 aa28.24■■■□□ 2.11
PSME3-204ENST00000543428 CNBD1Q8NA66 436 aa28.24■■■□□ 2.11
PSME3-204ENST00000543428 LAMB4A4D0S4 1761 aa28.24■■■□□ 2.11
PSME3-204ENST00000543428 PDE6BP35913 854 aa28.23■■■□□ 2.11
PSME3-204ENST00000543428 EIF4A1P60842 406 aaKnown RBP28.23■■■□□ 2.11
PSME3-204ENST00000543428 PRR5LQ6MZQ0 368 aa28.23■■■□□ 2.11
PSME3-204ENST00000543428 CLEC4GQ6UXB4 293 aa28.23■■■□□ 2.11
PSME3-204ENST00000543428 CCDC24Q8N4L8 307 aa28.23■■■□□ 2.11
PSME3-204ENST00000543428 TTLL6Q8N841 843 aa28.23■■■□□ 2.11
PSME3-204ENST00000543428 BRIP1Q9BX63 1249 aa28.23■■■□□ 2.11
PSME3-204ENST00000543428 DLEC1Q9Y238 1755 aa28.22■■■□□ 2.11
PSME3-204ENST00000543428 SENP3-EIF4A1A0A087X0R7 540 aa28.22■■■□□ 2.11
PSME3-204ENST00000543428 TMPOP42166 694 aaKnown RBP28.22■■■□□ 2.11
PSME3-204ENST00000543428 ST5P78524 1137 aa28.22■■■□□ 2.11
PSME3-204ENST00000543428 C9orf131Q5VYM1 1079 aa28.22■■■□□ 2.11
PSME3-204ENST00000543428 PDZRN3Q9UPQ7 1066 aa28.22■■■□□ 2.11
PSME3-204ENST00000543428 CCDC146Q8IYE0 955 aa28.21■■■□□ 2.11
PSME3-204ENST00000543428 TSPYL4Q9UJ04 414 aa28.21■■■□□ 2.11
PSME3-204ENST00000543428 ZNF622Q969S3 477 aaKnown RBP eCLIP28.2■■■□□ 2.1
PSME3-204ENST00000543428 NEUROD2Q15784 382 aa28.19■■■□□ 2.1
PSME3-204ENST00000543428 NBPF5PQ86XG9 351 aaPredicted RBP28.19■■■□□ 2.1
PSME3-204ENST00000543428 NGEFQ8N5V2 710 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms