RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 TRIM6-TRIM34B2RNG4 842 aa11.6□□□□□ -0.55
TCF4-208ENST00000543082 IPO4Q8TEX9 1081 aaKnown RBP11.6□□□□□ -0.55
TCF4-208ENST00000543082 RILPL2Q969X0 211 aa11.6□□□□□ -0.55
TCF4-208ENST00000543082 AEBP1Q8IUX7 1158 aa11.6□□□□□ -0.55
TCF4-208ENST00000543082 STAP2Q9UGK3 403 aa11.6□□□□□ -0.55
TCF4-208ENST00000543082 N4BP2Q86UW6 1770 aaPredicted RBP11.6□□□□□ -0.55
TCF4-208ENST00000543082 CCT4P50991 539 aaKnown RBP11.59□□□□□ -0.55
TCF4-208ENST00000543082 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 MAP3K11Q16584 847 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 TPRNQ4KMQ1 711 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 CCDC186Q7Z3E2 898 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 TIGD1Q96MW7 591 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 LIMCH1Q9UPQ0 1083 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 CHD2O14647 1828 aaKnown RBP11.59□□□□□ -0.55
TCF4-208ENST00000543082 NRKQ7Z2Y5 1582 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 POGZQ7Z3K3 1410 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 SLC20A2Q08357 652 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 DRC7Q8IY82 874 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 TTC14Q96N46 770 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 CALCOCO1Q9P1Z2 691 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 STK26Q9P289 416 aa11.59□□□□□ -0.55
TCF4-208ENST00000543082 CCDC171Q6TFL3 1326 aa11.58□□□□□ -0.56
TCF4-208ENST00000543082 FAM83GA6ND36 823 aa11.58□□□□□ -0.56
TCF4-208ENST00000543082 TSHZ3Q63HK5 1081 aa11.58□□□□□ -0.56
TCF4-208ENST00000543082 ZSCAN25Q6NSZ9 544 aa11.58□□□□□ -0.56
TCF4-208ENST00000543082 NUP62CLQ9H1M0 184 aa11.58□□□□□ -0.56
TCF4-208ENST00000543082 RAD50Q92878 1312 aa11.58□□□□□ -0.56
TCF4-208ENST00000543082 TMEM131LA2VDJ0 1609 aa11.58□□□□□ -0.56
TCF4-208ENST00000543082 GNAI2P04899 355 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 KCNJ4P48050 445 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
TCF4-208ENST00000543082 TYRO3Q06418 890 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 TPD52L1Q16890 204 aaPredicted RBP11.57□□□□□ -0.56
TCF4-208ENST00000543082 EXOC6BQ9Y2D4 811 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 MRVI1Q9Y6F6 885 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 ZNF75DP51815 510 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 AK2P54819 239 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 DNM1Q05193 864 aaKnown RBP11.57□□□□□ -0.56
TCF4-208ENST00000543082 SLFNL1Q499Z3 407 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 NUTM2DQ5VT03 806 aaPredicted RBP11.57□□□□□ -0.56
TCF4-208ENST00000543082 GGT6Q6P531 493 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 PLA2G4DQ86XP0 818 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
TCF4-208ENST00000543082 PRAM1Q96QH2 718 aa11.57□□□□□ -0.56
TCF4-208ENST00000543082 LRMPQ12912 555 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 CEP135Q66GS9 1140 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 DNAJC2Q99543 621 aaKnown RBP11.56□□□□□ -0.56
TCF4-208ENST00000543082 FAM53CQ9NYF3 392 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 CABP1Q9NZU7 370 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 MTMR6Q9Y217 621 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 SNX14Q9Y5W7 946 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 EMILIN1Q9Y6C2 1016 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 ARHGEF10O15013 1369 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 CHL1O00533 1208 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 CDC25BP30305 580 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 DCTN1Q14203 1278 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 RUFY3Q7L099 469 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.56□□□□□ -0.56
TCF4-208ENST00000543082 TDRD7Q8NHU6 1098 aaKnown RBP11.56□□□□□ -0.56
TCF4-208ENST00000543082 ELP1O95163 1332 aa11.56□□□□□ -0.56
TCF4-208ENST00000543082 NEMFO60524 1076 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 PDIA4P13667 645 aaKnown RBP11.55□□□□□ -0.56
TCF4-208ENST00000543082 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 LUZP1Q86V48 1076 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 CDK19Q9BWU1 502 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 TRIM5Q9C035 493 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 CBX8Q9HC52 389 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 DLC1Q96QB1 1528 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 GJB2P29033 226 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 NAA30Q147X3 362 aaPredicted RBP11.55□□□□□ -0.56
TCF4-208ENST00000543082 KMT5BQ4FZB7 885 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 ERO1AQ96HE7 468 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 TSPYL1Q9H0U9 437 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 SLC52A1Q9NWF4 448 aa11.55□□□□□ -0.56
TCF4-208ENST00000543082 EDC4Q6P2E9 1401 aaKnown RBP11.55□□□□□ -0.56
TCF4-208ENST00000543082 XRN1Q8IZH2 1706 aaKnown RBP11.55□□□□□ -0.56
TCF4-208ENST00000543082 CACNA1FO60840 1977 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 SETD1AO15047 1707 aaKnown RBP11.54□□□□□ -0.56
TCF4-208ENST00000543082 ZBTB22O15209 634 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 FBLN1P23142 703 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 KRT85P78386 507 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
TCF4-208ENST00000543082 SH2B1Q9NRF2 756 aaPredicted RBP11.54□□□□□ -0.56
TCF4-208ENST00000543082 ALKQ9UM73 1620 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 SLC4A2P04920 1241 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 GNAI3P08754 354 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 ANO6Q4KMQ2 910 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 UNC5CLQ8IV45 518 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 TNMDQ9H2S6 317 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 DDX19AQ9NUU7 478 aaKnown RBP11.54□□□□□ -0.56
TCF4-208ENST00000543082 CLIP2Q9UDT6 1046 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 NRBP1Q9UHY1 535 aa11.54□□□□□ -0.56
TCF4-208ENST00000543082 FAM208AQ9UK61 1670 aaKnown RBP11.54□□□□□ -0.56
TCF4-208ENST00000543082 SGSM2O43147 1006 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 SLC4A10Q6U841 1118 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 MON2Q7Z3U7 1717 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 TULP2O00295 520 aa11.53□□□□□ -0.56
TCF4-208ENST00000543082 CAVIN2O95810 425 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms