RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TEFQ10587 303 aa23.43■■□□□ 1.34
PPP1CA-210ENST00000542876 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
PPP1CA-210ENST00000542876 ZBTB1Q9Y2K1 713 aa23.43■■□□□ 1.34
PPP1CA-210ENST00000542876 CHRNA5P30532 468 aa23.42■■□□□ 1.34
PPP1CA-210ENST00000542876 C9orf131Q5VYM1 1079 aa23.42■■□□□ 1.34
PPP1CA-210ENST00000542876 GNAT3A8MTJ3 354 aa23.41■■□□□ 1.34
PPP1CA-210ENST00000542876 CANXP27824 592 aaKnown RBP23.41■■□□□ 1.34
PPP1CA-210ENST00000542876 KCPQ6ZWJ8 1503 aa23.41■■□□□ 1.34
PPP1CA-210ENST00000542876 NFIXQ14938 502 aa23.4■■□□□ 1.34
PPP1CA-210ENST00000542876 TOMM70O94826 608 aa23.39■■□□□ 1.33
PPP1CA-210ENST00000542876 CFAP53Q96M91 514 aa23.39■■□□□ 1.33
PPP1CA-210ENST00000542876 A0A087WZG4 1122 aa23.38■■□□□ 1.33
PPP1CA-210ENST00000542876 TEX13AQ9BXU3 409 aaPredicted RBP23.38■■□□□ 1.33
PPP1CA-210ENST00000542876 SERPINB2P05120 415 aa23.37■■□□□ 1.33
PPP1CA-210ENST00000542876 ZNF790Q6PG37 636 aa23.37■■□□□ 1.33
PPP1CA-210ENST00000542876 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
PPP1CA-210ENST00000542876 ADAMTS7Q9UKP4 1686 aa23.36■■□□□ 1.33
PPP1CA-210ENST00000542876 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
PPP1CA-210ENST00000542876 C16orf71Q8IYS4 520 aaPredicted RBP23.36■■□□□ 1.33
PPP1CA-210ENST00000542876 IL17REQ8NFR9 667 aa23.36■■□□□ 1.33
PPP1CA-210ENST00000542876 ZNF496Q96IT1 587 aaPredicted RBP23.36■■□□□ 1.33
PPP1CA-210ENST00000542876 NMRK2Q9NPI5 230 aa23.36■■□□□ 1.33
PPP1CA-210ENST00000542876 RNF181Q9P0P0 153 aa23.36■■□□□ 1.33
PPP1CA-210ENST00000542876 NUDCQ9Y266 331 aa23.35■■□□□ 1.33
PPP1CA-210ENST00000542876 KDM2BQ8NHM5 1336 aa23.34■■□□□ 1.33
PPP1CA-210ENST00000542876 BRCA1P38398 1863 aaKnown RBP23.34■■□□□ 1.33
PPP1CA-210ENST00000542876 EIF5P55010 431 aaKnown RBP23.34■■□□□ 1.33
PPP1CA-210ENST00000542876 BCL2L12Q9HB09 334 aa23.34■■□□□ 1.33
PPP1CA-210ENST00000542876 ZNF330Q9Y3S2 320 aaPredicted RBP23.34■■□□□ 1.33
PPP1CA-210ENST00000542876 HEG1Q9ULI3 1381 aa23.34■■□□□ 1.33
PPP1CA-210ENST00000542876 APLP1P51693 650 aa23.33■■□□□ 1.33
PPP1CA-210ENST00000542876 BICDL1Q6ZP65 573 aa23.33■■□□□ 1.33
PPP1CA-210ENST00000542876 FMNL2Q96PY5 1086 aa23.33■■□□□ 1.33
PPP1CA-210ENST00000542876 ARFGEF1Q9Y6D6 1849 aa23.32■■□□□ 1.32
PPP1CA-210ENST00000542876 PRKAR2BP31323 418 aa23.32■■□□□ 1.32
PPP1CA-210ENST00000542876 H0YIN7 160 aa23.31■■□□□ 1.32
PPP1CA-210ENST00000542876 TTLL6Q8N841 843 aa23.31■■□□□ 1.32
PPP1CA-210ENST00000542876 C2CD5Q86YS7 1000 aa23.3■■□□□ 1.32
PPP1CA-210ENST00000542876 BTBD11A6QL63 1104 aa23.29■■□□□ 1.32
PPP1CA-210ENST00000542876 IL6STP40189 918 aaPredicted RBP23.29■■□□□ 1.32
PPP1CA-210ENST00000542876 RBM46Q8TBY0 533 aaKnown RBP23.29■■□□□ 1.32
PPP1CA-210ENST00000542876 PHACTR3Q96KR7 559 aa23.29■■□□□ 1.32
PPP1CA-210ENST00000542876 UBR2Q8IWV8 1755 aa23.29■■□□□ 1.32
PPP1CA-210ENST00000542876 VIRMAQ69YN4 1812 aaKnown RBP23.29■■□□□ 1.32
PPP1CA-210ENST00000542876 U2AF1L5P0DN76 240 aaPredicted RBP23.28■■□□□ 1.32
PPP1CA-210ENST00000542876 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.32
PPP1CA-210ENST00000542876 RTF1Q92541 710 aaKnown RBP23.28■■□□□ 1.32
PPP1CA-210ENST00000542876 RSPH6AQ9H0K4 717 aa23.28■■□□□ 1.32
PPP1CA-210ENST00000542876 TBC1D2BQ9UPU7 963 aa23.28■■□□□ 1.32
PPP1CA-210ENST00000542876 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.32
PPP1CA-210ENST00000542876 TBC1D9BQ66K14 1250 aa23.27■■□□□ 1.32
PPP1CA-210ENST00000542876 NPHP1O15259 732 aa23.26■■□□□ 1.31
PPP1CA-210ENST00000542876 LMNB1P20700 586 aa23.26■■□□□ 1.31
PPP1CA-210ENST00000542876 RASSF7Q02833 373 aa23.26■■□□□ 1.31
PPP1CA-210ENST00000542876 PDZRN3Q9UPQ7 1066 aa23.26■■□□□ 1.31
PPP1CA-210ENST00000542876 ZC3H4Q9UPT8 1303 aaKnown RBP23.26■■□□□ 1.31
PPP1CA-210ENST00000542876 A1BGP04217 495 aa23.25■■□□□ 1.31
PPP1CA-210ENST00000542876 PDE6BP35913 854 aa23.25■■□□□ 1.31
PPP1CA-210ENST00000542876 RRAGCQ9HB90 399 aa23.25■■□□□ 1.31
PPP1CA-210ENST00000542876 CARMIL3Q8ND23 1372 aa23.25■■□□□ 1.31
PPP1CA-210ENST00000542876 FSTL1Q12841 308 aa23.24■■□□□ 1.31
PPP1CA-210ENST00000542876 ZNF622Q969S3 477 aaKnown RBP eCLIP23.24■■□□□ 1.31
PPP1CA-210ENST00000542876 SETDB2Q96T68 719 aa23.24■■□□□ 1.31
PPP1CA-210ENST00000542876 BRIP1Q9BX63 1249 aa23.24■■□□□ 1.31
PPP1CA-210ENST00000542876 NRXN2Q9P2S2 1712 aa23.24■■□□□ 1.31
PPP1CA-210ENST00000542876 PPP2R1AP30153 589 aa23.23■■□□□ 1.31
PPP1CA-210ENST00000542876 AFDNP55196 1824 aaKnown RBP23.23■■□□□ 1.31
PPP1CA-210ENST00000542876 KCNQ3O43525 872 aa23.22■■□□□ 1.31
PPP1CA-210ENST00000542876 IFFO2Q5TF58 517 aa23.21■■□□□ 1.31
PPP1CA-210ENST00000542876 PRR5LQ6MZQ0 368 aa23.21■■□□□ 1.31
PPP1CA-210ENST00000542876 DZIP3Q86Y13 1208 aaKnown RBP23.21■■□□□ 1.31
PPP1CA-210ENST00000542876 CNBD1Q8NA66 436 aa23.21■■□□□ 1.31
PPP1CA-210ENST00000542876 CAMTA2O94983 1202 aa23.2■■□□□ 1.3
PPP1CA-210ENST00000542876 SNRPA1P09661 255 aaKnown RBP23.2■■□□□ 1.3
PPP1CA-210ENST00000542876 ST5P78524 1137 aa23.2■■□□□ 1.3
PPP1CA-210ENST00000542876 MCM10Q7L590 875 aa23.2■■□□□ 1.3
PPP1CA-210ENST00000542876 CCDC24Q8N4L8 307 aa23.19■■□□□ 1.3
PPP1CA-210ENST00000542876 HTATSF1O43719 755 aaKnown RBP23.18■■□□□ 1.3
PPP1CA-210ENST00000542876 NEFMP07197 916 aa23.18■■□□□ 1.3
PPP1CA-210ENST00000542876 USP16Q9Y5T5 823 aa23.18■■□□□ 1.3
PPP1CA-210ENST00000542876 SIPA1L3O60292 1781 aaPredicted RBP23.18■■□□□ 1.3
PPP1CA-210ENST00000542876 GLTPD2A6NH11 291 aa23.17■■□□□ 1.3
PPP1CA-210ENST00000542876 NFKBIEO00221 500 aa23.17■■□□□ 1.3
PPP1CA-210ENST00000542876 SMC1BQ8NDV3 1235 aa23.17■■□□□ 1.3
PPP1CA-210ENST00000542876 ZNF219Q9P2Y4 722 aaPredicted RBP23.17■■□□□ 1.3
PPP1CA-210ENST00000542876 ZNF652Q9Y2D9 606 aa23.17■■□□□ 1.3
PPP1CA-210ENST00000542876 SCN7AQ01118 1682 aa23.16■■□□□ 1.3
PPP1CA-210ENST00000542876 C21orf2O43822 256 aa23.16■■□□□ 1.3
PPP1CA-210ENST00000542876 VEGFAP15692 232 aaPredicted RBP23.16■■□□□ 1.3
PPP1CA-210ENST00000542876 DNAJC5GQ8N7S2 189 aa23.16■■□□□ 1.3
PPP1CA-210ENST00000542876 DLEC1Q9Y238 1755 aa23.16■■□□□ 1.3
PPP1CA-210ENST00000542876 PIP4K2AP48426 406 aaPredicted RBP23.15■■□□□ 1.3
PPP1CA-210ENST00000542876 PRELPP51888 382 aa23.15■■□□□ 1.3
PPP1CA-210ENST00000542876 DPY19L2Q6NUT2 758 aa23.15■■□□□ 1.3
PPP1CA-210ENST00000542876 CLEC4GQ6UXB4 293 aa23.15■■□□□ 1.3
PPP1CA-210ENST00000542876 CNKSR1Q969H4 720 aa23.15■■□□□ 1.3
PPP1CA-210ENST00000542876 SBF1O95248 1867 aa23.14■■□□□ 1.29
PPP1CA-210ENST00000542876 DCTN1Q14203 1278 aa23.14■■□□□ 1.29
PPP1CA-210ENST00000542876 NBPF5PQ86XG9 351 aaPredicted RBP23.14■■□□□ 1.29
PPP1CA-210ENST00000542876 TNRC6CQ9HCJ0 1690 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms