RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 TTC21AQ8NDW8 1320 aa6.41□□□□□ -1.38
KDM3B-209ENST00000542866 HCLS1P14317 486 aaPredicted RBP6.41□□□□□ -1.38
KDM3B-209ENST00000542866 MEIS3Q99687 375 aa6.41□□□□□ -1.38
KDM3B-209ENST00000542866 KIF3AQ9Y496 699 aa6.41□□□□□ -1.38
KDM3B-209ENST00000542866 ADGRL3Q9HAR2 1447 aa6.41□□□□□ -1.38
KDM3B-209ENST00000542866 PIBF1Q8WXW3 757 aa6.4□□□□□ -1.38
KDM3B-209ENST00000542866 PRIMPOLQ96LW4 560 aa6.4□□□□□ -1.38
KDM3B-209ENST00000542866 LRRC59Q96AG4 307 aaKnown RBP6.4□□□□□ -1.38
KDM3B-209ENST00000542866 PALD1Q9ULE6 856 aa6.4□□□□□ -1.38
KDM3B-209ENST00000542866 EXOC6BQ9Y2D4 811 aa6.4□□□□□ -1.38
KDM3B-209ENST00000542866 SETBP1Q9Y6X0 1596 aa6.4□□□□□ -1.38
KDM3B-209ENST00000542866 MCM2P49736 904 aa6.4□□□□□ -1.39
KDM3B-209ENST00000542866 DMTNQ08495 405 aa6.4□□□□□ -1.39
KDM3B-209ENST00000542866 RRS1Q15050 365 aaKnown RBP6.4□□□□□ -1.39
KDM3B-209ENST00000542866 ZNF710Q8N1W2 664 aa6.4□□□□□ -1.39
KDM3B-209ENST00000542866 SPC24Q8NBT2 197 aa6.4□□□□□ -1.39
KDM3B-209ENST00000542866 LARP6Q9BRS8 491 aaKnown RBP6.4□□□□□ -1.39
KDM3B-209ENST00000542866 NLRP2Q9NX02 1062 aa6.4□□□□□ -1.39
KDM3B-209ENST00000542866 TULP4Q9NRJ4 1543 aa6.4□□□□□ -1.39
KDM3B-209ENST00000542866 HMMRO75330 724 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 ZSCAN20P17040 1043 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-209ENST00000542866 PDE1AP54750 535 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 LMOD3Q0VAK6 560 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 CHAF1AQ13111 956 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-209ENST00000542866 COL3A1P02461 1466 aaPredicted RBP6.39□□□□□ -1.39
KDM3B-209ENST00000542866 PRR36Q9H6K5 1346 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 UBR1Q8IWV7 1749 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 PTPRUQ92729 1446 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 DTNBO60941 627 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 ADAMTS2O95450 1211 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 ZNF853P0CG23 659 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 ATP2B3Q16720 1220 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 DDX17Q92841 729 aaKnown RBP6.39□□□□□ -1.39
KDM3B-209ENST00000542866 CNPY2Q9Y2B0 182 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 TECPR2O15040 1411 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 SOCS7O14512 581 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 ZBTB22O15209 634 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 FIBPO43427 364 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 PDCL2Q8N4E4 241 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 FAM184AQ8NB25 1140 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 BCL2L12Q9HB09 334 aa6.39□□□□□ -1.39
KDM3B-209ENST00000542866 F6X3S4 739 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 SLC4A2P04920 1241 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 UVSSAQ2YD98 709 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 CCDC183Q5T5S1 534 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 ESYT1Q9BSJ8 1104 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 STRN4Q9NRL3 753 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 ZRANB1Q9UGI0 708 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 ADGRB1O14514 1584 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 DIP2AQ14689 1571 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 WDR33Q9C0J8 1336 aaKnown RBP6.38□□□□□ -1.39
KDM3B-209ENST00000542866 USP32Q8NFA0 1604 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 GIMAP6Q6P9H5 292 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 CERKQ8TCT0 537 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 RTF1Q92541 710 aaKnown RBP6.38□□□□□ -1.39
KDM3B-209ENST00000542866 CUL4AQ13619 759 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 UTP14CQ5TAP6 766 aaKnown RBP6.38□□□□□ -1.39
KDM3B-209ENST00000542866 MCM10Q7L590 875 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 SRCIN1Q9C0H9 1055 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 MIS18AQ9NYP9 233 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 CHMP3Q9Y3E7 222 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 PNPLA6Q8IY17 1366 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 LRRC7Q96NW7 1537 aa6.38□□□□□ -1.39
KDM3B-209ENST00000542866 MX1P20591 662 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 U2AF2P26368 475 aaKnown RBP eCLIP6.37□□□□□ -1.393e-11■■■■■ 33.4
KDM3B-209ENST00000542866 BRINP3Q76B58 766 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 CABLES1Q8TDN4 633 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 RAPGEF4Q8WZA2 1011 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 EDC4Q6P2E9 1401 aaKnown RBP6.37□□□□□ -1.39
KDM3B-209ENST00000542866 DLC1Q96QB1 1528 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 PPLO60437 1756 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 RIOK3O14730 519 aaKnown RBP6.37□□□□□ -1.39
KDM3B-209ENST00000542866 KDM4AO75164 1064 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 MAP4K4O95819 1239 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-209ENST00000542866 IL13P35225 146 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 SECISBP2LQ93073 1101 aaKnown RBP6.37□□□□□ -1.39
KDM3B-209ENST00000542866 INTS4Q96HW7 963 aaKnown RBP6.37□□□□□ -1.39
KDM3B-209ENST00000542866 DIAPH3Q9NSV4 1193 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 RTL1A6NKG5 1358 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 ANKARQ7Z5J8 1434 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 HSP90B1P14625 803 aaKnown RBP6.37□□□□□ -1.39
KDM3B-209ENST00000542866 FKBP5Q13451 457 aaPredicted RBP6.37□□□□□ -1.39
KDM3B-209ENST00000542866 TOM1L2Q6ZVM7 507 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 NGLY1Q96IV0 654 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 PYCARDQ9ULZ3 195 aa6.37□□□□□ -1.39
KDM3B-209ENST00000542866 GCP02774 474 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 CHMLP26374 656 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 DRC7Q8IY82 874 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 GTPBP4Q9BZE4 634 aaKnown RBP6.36□□□□□ -1.39
KDM3B-209ENST00000542866 ARHGEF10O15013 1369 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 LETM1O95202 739 aaPredicted RBP6.36□□□□□ -1.39
KDM3B-209ENST00000542866 LRRCC1Q9C099 1032 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 ATP10DQ9P241 1426 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 CHRNA2Q15822 529 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 SULT6B1Q6IMI4 303 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 ZNF771Q7L3S4 317 aaPredicted RBP6.36□□□□□ -1.39
KDM3B-209ENST00000542866 AEBP1Q8IUX7 1158 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 NECTIN2Q92692 538 aa6.36□□□□□ -1.39
KDM3B-209ENST00000542866 BCCIPQ9P287 314 aaKnown RBP eCLIP6.36□□□□□ -1.39
KDM3B-209ENST00000542866 SMC3Q9UQE7 1217 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms