RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 CACNA1FO60840 1977 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 DYNC1I1O14576 645 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 HTATSF1O43719 755 aaKnown RBP15.59■□□□□ 0.09
DDX11-223ENST00000542838 RPAP1Q9BWH6 1393 aaPredicted RBP15.59■□□□□ 0.09
DDX11-223ENST00000542838 GNAT3A8MTJ3 354 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 FAM184AQ8NB25 1140 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 SURF6O75683 361 aaKnown RBP15.59■□□□□ 0.09
DDX11-223ENST00000542838 UVSSAQ2YD98 709 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 CCDC183Q5T5S1 534 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 SSH3Q8TE77 659 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 CNPY2Q9Y2B0 182 aa15.59■□□□□ 0.09
DDX11-223ENST00000542838 TTC21AQ8NDW8 1320 aa15.58■□□□□ 0.09
DDX11-223ENST00000542838 MPNDQ8N594 471 aa15.58■□□□□ 0.08
DDX11-223ENST00000542838 RAB11FIP3O75154 756 aa15.58■□□□□ 0.08
DDX11-223ENST00000542838 TMEM87AQ8NBN3 555 aa15.58■□□□□ 0.08
DDX11-223ENST00000542838 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
DDX11-223ENST00000542838 RAD50Q92878 1312 aa15.58■□□□□ 0.08
DDX11-223ENST00000542838 SGSM2O43147 1006 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 PPP1R42Q7Z4L9 355 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 USP25Q9UHP3 1055 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 ZBTB7CA1YPR0 619 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 ZSCAN22P10073 491 aaPredicted RBP15.57■□□□□ 0.08
DDX11-223ENST00000542838 DNTTIP2Q5QJE6 756 aaKnown RBP15.57■□□□□ 0.08
DDX11-223ENST00000542838 CYB5RLQ6IPT4 315 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 RHPN1Q8TCX5 695 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 LARP6Q9BRS8 491 aaKnown RBP15.57■□□□□ 0.08
DDX11-223ENST00000542838 TMEM2Q9UHN6 1383 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 ADAMTS13Q76LX8 1427 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 PI4K2BQ8TCG2 481 aa15.57■□□□□ 0.08
DDX11-223ENST00000542838 LRRC37A3O60309 1634 aa15.56■□□□□ 0.08
DDX11-223ENST00000542838 PXDNLA1KZ92 1463 aa15.56■□□□□ 0.08
DDX11-223ENST00000542838 N4BP2Q86UW6 1770 aaPredicted RBP15.56■□□□□ 0.08
DDX11-223ENST00000542838 AK2P54819 239 aa15.56■□□□□ 0.08
DDX11-223ENST00000542838 ZNF830Q96NB3 372 aaPredicted RBP15.56■□□□□ 0.08
DDX11-223ENST00000542838 PHAXQ9H814 394 aaKnown RBP15.56■□□□□ 0.08
DDX11-223ENST00000542838 LETM1O95202 739 aaPredicted RBP15.56■□□□□ 0.08
DDX11-223ENST00000542838 CNTROBQ8N137 903 aa15.56■□□□□ 0.08
DDX11-223ENST00000542838 TTC14Q96N46 770 aa15.56■□□□□ 0.08
DDX11-223ENST00000542838 STX6O43752 255 aa15.55■□□□□ 0.08
DDX11-223ENST00000542838 TAF7Q15545 349 aaPredicted RBP15.55■□□□□ 0.08
DDX11-223ENST00000542838 HDGFL1Q5TGJ6 251 aa15.55■□□□□ 0.08
DDX11-223ENST00000542838 NGDNQ8NEJ9 315 aaKnown RBP15.55■□□□□ 0.08
DDX11-223ENST00000542838 IL17REQ8NFR9 667 aa15.55■□□□□ 0.08
DDX11-223ENST00000542838 LSG1Q9H089 658 aaKnown RBP15.55■□□□□ 0.08
DDX11-223ENST00000542838 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.55■□□□□ 0.08
DDX11-223ENST00000542838 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
DDX11-223ENST00000542838 LIMCH1Q9UPQ0 1083 aa15.55■□□□□ 0.08
DDX11-223ENST00000542838 SMC3Q9UQE7 1217 aa15.55■□□□□ 0.08
DDX11-223ENST00000542838 TNRQ92752 1358 aa15.55■□□□□ 0.08
DDX11-223ENST00000542838 ADCY5O95622 1261 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 HCLS1P14317 486 aaPredicted RBP15.54■□□□□ 0.08
DDX11-223ENST00000542838 SYT1P21579 422 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 UBE2HP62256 183 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 POLA2Q14181 598 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 RUFY3Q7L099 469 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 KIF1BPQ96EK5 621 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 SRGAP3O43295 1099 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 MTERF4Q7Z6M4 381 aaKnown RBP15.54■□□□□ 0.08
DDX11-223ENST00000542838 MAP3K5Q99683 1374 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 FIBPO43427 364 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 F13A1P00488 732 aa15.54■□□□□ 0.08
DDX11-223ENST00000542838 CWC27Q6UX04 472 aaKnown RBP15.54■□□□□ 0.08
DDX11-223ENST00000542838 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
DDX11-223ENST00000542838 PIBF1Q8WXW3 757 aa15.53■□□□□ 0.08
DDX11-223ENST00000542838 SPG7Q9UQ90 795 aa15.53■□□□□ 0.08
DDX11-223ENST00000542838 ATP6V1DQ9Y5K8 247 aa15.53■□□□□ 0.08
DDX11-223ENST00000542838 ARID3AQ99856 593 aa15.52■□□□□ 0.08
DDX11-223ENST00000542838 TTC12Q9H892 705 aaPredicted RBP15.52■□□□□ 0.08
DDX11-223ENST00000542838 UBR1Q8IWV7 1749 aa15.52■□□□□ 0.08
DDX11-223ENST00000542838 CPA1P15085 419 aa15.52■□□□□ 0.08
DDX11-223ENST00000542838 CASTP20810 708 aaKnown RBP15.52■□□□□ 0.08
DDX11-223ENST00000542838 AEBP2Q6ZN18 517 aaPredicted RBP15.52■□□□□ 0.08
DDX11-223ENST00000542838 EIF2S2P20042 333 aaKnown RBP15.52■□□□□ 0.07
DDX11-223ENST00000542838 NLRP6P59044 892 aa15.52■□□□□ 0.07
DDX11-223ENST00000542838 NOLC1Q14978 699 aaKnown RBP eCLIP15.52■□□□□ 0.07
DDX11-223ENST00000542838 SLC26A8Q96RN1 970 aa15.52■□□□□ 0.07
DDX11-223ENST00000542838 MYRIPQ8NFW9 859 aa15.51■□□□□ 0.07
DDX11-223ENST00000542838 LTV1Q96GA3 475 aaPredicted RBP15.51■□□□□ 0.07
DDX11-223ENST00000542838 BABAM1Q9NWV8 329 aa15.51■□□□□ 0.07
DDX11-223ENST00000542838 NBPF7P0C2Y1 421 aaPredicted RBP15.51■□□□□ 0.07
DDX11-223ENST00000542838 LTKP29376 864 aa15.51■□□□□ 0.07
DDX11-223ENST00000542838 PLCB2Q00722 1185 aa15.51■□□□□ 0.07
DDX11-223ENST00000542838 LARGE1O95461 756 aa15.5■□□□□ 0.07
DDX11-223ENST00000542838 HOXC9P31274 260 aa15.5■□□□□ 0.07
DDX11-223ENST00000542838 CCDC83Q8IWF9 413 aa15.5■□□□□ 0.07
DDX11-223ENST00000542838 PTPRUQ92729 1446 aa15.5■□□□□ 0.07
DDX11-223ENST00000542838 KDM4AO75164 1064 aa15.5■□□□□ 0.07
DDX11-223ENST00000542838 GJB2P29033 226 aa15.5■□□□□ 0.07
DDX11-223ENST00000542838 GIMAP6Q6P9H5 292 aa15.5■□□□□ 0.07
DDX11-223ENST00000542838 OS9Q13438 667 aaPredicted RBP15.49■□□□□ 0.07
DDX11-223ENST00000542838 NUTM2GQ5VZR2 741 aa15.49■□□□□ 0.07
DDX11-223ENST00000542838 DIAPH3Q9NSV4 1193 aa15.49■□□□□ 0.07
DDX11-223ENST00000542838 DTNBO60941 627 aa15.49■□□□□ 0.07
DDX11-223ENST00000542838 C17orf53Q8N3J3 647 aaPredicted RBP15.49■□□□□ 0.07
DDX11-223ENST00000542838 PLEKHG1Q9ULL1 1385 aa15.49■□□□□ 0.07
DDX11-223ENST00000542838 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
DDX11-223ENST00000542838 PIK3C2AO00443 1686 aa15.49■□□□□ 0.07
DDX11-223ENST00000542838 DNM1Q05193 864 aaKnown RBP15.49■□□□□ 0.07
DDX11-223ENST00000542838 HSP90AB4PQ58FF6 505 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms