RNA–Protein interactions for RNA: ENST00000542669.1

PACRG-206, Transcript of parkin coregulated, humanhuman

TSL 4

Gene PACRG, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-206ENST00000542669 DOT1LQ8TEK3 1739 aa8.55□□□□□ -1.04
PACRG-206ENST00000542669 SNRPA1P09661 255 aaKnown RBP8.55□□□□□ -1.04
PACRG-206ENST00000542669 DDB1Q16531 1140 aa8.55□□□□□ -1.04
PACRG-206ENST00000542669 PELP1Q8IZL8 1130 aaKnown RBP8.55□□□□□ -1.04
PACRG-206ENST00000542669 USP21Q9UK80 565 aa8.55□□□□□ -1.04
PACRG-206ENST00000542669 CCDC9Q9Y3X0 531 aaKnown RBP8.55□□□□□ -1.04
PACRG-206ENST00000542669 THSD7AQ9UPZ6 1657 aa8.55□□□□□ -1.04
PACRG-206ENST00000542669 BCL9O00512 1426 aa8.54□□□□□ -1.04
PACRG-206ENST00000542669 PXDNLA1KZ92 1463 aa8.54□□□□□ -1.04
PACRG-206ENST00000542669 ZBTB7BO15156 539 aaPredicted RBP8.54□□□□□ -1.04
PACRG-206ENST00000542669 MEX3CQ5U5Q3 659 aaKnown RBP8.54□□□□□ -1.04
PACRG-206ENST00000542669 CENPQQ7L2Z9 268 aaPredicted RBP8.54□□□□□ -1.04
PACRG-206ENST00000542669 MARCH10Q8NA82 808 aaPredicted RBP8.54□□□□□ -1.04
PACRG-206ENST00000542669 PIGBQ92521 554 aa8.54□□□□□ -1.04
PACRG-206ENST00000542669 CHMP4BQ9H444 224 aaKnown RBP8.54□□□□□ -1.04
PACRG-206ENST00000542669 TMOD3Q9NYL9 352 aa8.54□□□□□ -1.04
PACRG-206ENST00000542669 DBF4Q9UBU7 674 aaPredicted RBP8.54□□□□□ -1.04
PACRG-206ENST00000542669 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
PACRG-206ENST00000542669 ATRNO75882 1429 aa8.54□□□□□ -1.04
PACRG-206ENST00000542669 F6X3S4 739 aa8.53□□□□□ -1.04
PACRG-206ENST00000542669 CCT4P50991 539 aaKnown RBP8.53□□□□□ -1.04
PACRG-206ENST00000542669 FKBP5Q13451 457 aaPredicted RBP8.53□□□□□ -1.04
PACRG-206ENST00000542669 PDIA6Q15084 440 aa8.53□□□□□ -1.04
PACRG-206ENST00000542669 FAM98CQ17RN3 349 aaKnown RBP8.53□□□□□ -1.04
PACRG-206ENST00000542669 PROSER3Q2NL68 480 aa8.53□□□□□ -1.04
PACRG-206ENST00000542669 PHAXQ9H814 394 aaKnown RBP8.53□□□□□ -1.04
PACRG-206ENST00000542669 DDX21Q9NR30 783 aaKnown RBP eCLIP8.53□□□□□ -1.04
PACRG-206ENST00000542669 HYPKQ9NX55 129 aa8.53□□□□□ -1.04
PACRG-206ENST00000542669 AFF2P51816 1311 aa8.53□□□□□ -1.04
PACRG-206ENST00000542669 KAT6BQ8WYB5 2073 aa8.52□□□□□ -1.05
PACRG-206ENST00000542669 IGHDP01880 384 aa8.52□□□□□ -1.05
PACRG-206ENST00000542669 ANXA1P04083 346 aa8.52□□□□□ -1.05
PACRG-206ENST00000542669 ASAP1Q9ULH1 1129 aa8.52□□□□□ -1.05
PACRG-206ENST00000542669 USP16Q9Y5T5 823 aa8.52□□□□□ -1.05
PACRG-206ENST00000542669 ERBB4Q15303 1308 aa8.52□□□□□ -1.05
PACRG-206ENST00000542669 ADCY9O60503 1353 aa8.51□□□□□ -1.05
PACRG-206ENST00000542669 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
PACRG-206ENST00000542669 HDAC1Q13547 482 aaPredicted RBP8.51□□□□□ -1.05
PACRG-206ENST00000542669 LRP10Q7Z4F1 713 aa8.51□□□□□ -1.05
PACRG-206ENST00000542669 GJD4Q96KN9 370 aaPredicted RBP8.51□□□□□ -1.05
PACRG-206ENST00000542669 ATG3Q9NT62 314 aa8.51□□□□□ -1.05
PACRG-206ENST00000542669 ATP10DQ9P241 1426 aa8.51□□□□□ -1.05
PACRG-206ENST00000542669 PI4KAP2A4QPH2 592 aa8.5□□□□□ -1.05
PACRG-206ENST00000542669 ONECUT3O60422 494 aaPredicted RBP8.5□□□□□ -1.05
PACRG-206ENST00000542669 PTCD1O75127 700 aaKnown RBP8.5□□□□□ -1.05
PACRG-206ENST00000542669 SLC4A10Q6U841 1118 aa8.5□□□□□ -1.05
PACRG-206ENST00000542669 VSIG10Q8N0Z9 540 aa8.5□□□□□ -1.05
PACRG-206ENST00000542669 PI4KAP1Q8N8J0 262 aa8.5□□□□□ -1.05
PACRG-206ENST00000542669 DNAAF4Q8WXU2 420 aa8.5□□□□□ -1.05
PACRG-206ENST00000542669 RWDD1Q9H446 243 aaPredicted RBP8.5□□□□□ -1.05
PACRG-206ENST00000542669 TRPC5Q9UL62 973 aaPredicted RBP8.5□□□□□ -1.05
PACRG-206ENST00000542669 TJP1Q07157 1748 aa8.49□□□□□ -1.05
PACRG-206ENST00000542669 NBPF26B4DH59 902 aa8.49□□□□□ -1.05
PACRG-206ENST00000542669 BEND3Q5T5X7 828 aa8.49□□□□□ -1.05
PACRG-206ENST00000542669 NBPF14Q5TI25 921 aa8.49□□□□□ -1.05
PACRG-206ENST00000542669 NBPF10Q6P3W6 841 aaKnown RBP8.49□□□□□ -1.05
PACRG-206ENST00000542669 KSR2Q6VAB6 950 aa8.49□□□□□ -1.05
PACRG-206ENST00000542669 NBPF15Q8N660 670 aa8.49□□□□□ -1.05
PACRG-206ENST00000542669 SYTL4Q96C24 671 aaPredicted RBP8.49□□□□□ -1.05
PACRG-206ENST00000542669 MEIS3Q99687 375 aa8.49□□□□□ -1.05
PACRG-206ENST00000542669 C1orf115Q9H7X2 142 aa8.49□□□□□ -1.05
PACRG-206ENST00000542669 CICQ96RK0 1608 aaPredicted RBP8.49□□□□□ -1.05
PACRG-206ENST00000542669 DDX58O95786 925 aaKnown RBP8.48□□□□□ -1.05
PACRG-206ENST00000542669 MYL6BP14649 208 aa8.48□□□□□ -1.05
PACRG-206ENST00000542669 SIRT2Q8IXJ6 389 aa8.48□□□□□ -1.05
PACRG-206ENST00000542669 XAGE3Q8WTP9 111 aa8.48□□□□□ -1.05
PACRG-206ENST00000542669 ACSBG1Q96GR2 724 aa8.48□□□□□ -1.05
PACRG-206ENST00000542669 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
PACRG-206ENST00000542669 TEX13AQ9BXU3 409 aaPredicted RBP8.48□□□□□ -1.05
PACRG-206ENST00000542669 SRCIN1Q9C0H9 1055 aa8.48□□□□□ -1.05
PACRG-206ENST00000542669 MAP3K2Q9Y2U5 619 aa8.48□□□□□ -1.05
PACRG-206ENST00000542669 IBTKQ9P2D0 1353 aaPredicted RBP8.48□□□□□ -1.05
PACRG-206ENST00000542669 NHSQ6T4R5 1651 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 NUP188Q5SRE5 1749 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 A1BGP04217 495 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 GNAI3P08754 354 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 PIP4K2AP48426 406 aaPredicted RBP8.47□□□□□ -1.05
PACRG-206ENST00000542669 AIMP1Q12904 312 aaKnown RBP8.47□□□□□ -1.05
PACRG-206ENST00000542669 COPS6Q7L5N1 327 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 DNAJC10Q8IXB1 793 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 SMC5Q8IY18 1101 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 ANKRD44Q8N8A2 993 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 USP44Q9H0E7 712 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 QTRT2Q9H974 415 aaKnown RBP8.47□□□□□ -1.05
PACRG-206ENST00000542669 ARFGEF2Q9Y6D5 1785 aa8.47□□□□□ -1.05
PACRG-206ENST00000542669 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.05
PACRG-206ENST00000542669 A0A0G2JS52 829 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 KCNQ2O43526 872 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 ALDH1L1O75891 902 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 STARD3NLO95772 234 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 GNAI2P04899 355 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 MYT1Q01538 1121 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 CEP85Q6P2H3 762 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 ANKRD13DQ6ZTN6 518 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 RIC3Q7Z5B4 369 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 SKAP1Q86WV1 359 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 RPAP2Q8IXW5 612 aaPredicted RBP8.46□□□□□ -1.06
PACRG-206ENST00000542669 LINS1Q8NG48 757 aa8.46□□□□□ -1.06
PACRG-206ENST00000542669 RBM42Q9BTD8 480 aaKnown RBP8.46□□□□□ -1.06
PACRG-206ENST00000542669 RREB1Q92766 1687 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms