RNA–Protein interactions for RNA: ENST00000542436.1

SCNN1A-218, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-218ENST00000542436 GNAT3A8MTJ3 354 aa20.74■□□□□ 0.91
SCNN1A-218ENST00000542436 POLRMTO00411 1230 aaKnown RBP20.74■□□□□ 0.91
SCNN1A-218ENST00000542436 TEFQ10587 303 aa20.74■□□□□ 0.91
SCNN1A-218ENST00000542436 CFAP53Q96M91 514 aa20.74■□□□□ 0.91
SCNN1A-218ENST00000542436 NARFQ9UHQ1 456 aa20.74■□□□□ 0.91
SCNN1A-218ENST00000542436 CEP350Q5VT06 3117 aa20.74■□□□□ 0.91
SCNN1A-218ENST00000542436 NRXN2Q9P2S2 1712 aa20.73■□□□□ 0.91
SCNN1A-218ENST00000542436 KCNA3P22001 575 aa20.73■□□□□ 0.91
SCNN1A-218ENST00000542436 TM4SF1P30408 202 aa20.73■□□□□ 0.91
SCNN1A-218ENST00000542436 DALRD3Q5D0E6 543 aaKnown RBP20.73■□□□□ 0.91
SCNN1A-218ENST00000542436 ZBTB1Q9Y2K1 713 aa20.73■□□□□ 0.91
SCNN1A-218ENST00000542436 AFDNP55196 1824 aaKnown RBP20.73■□□□□ 0.91
SCNN1A-218ENST00000542436 STARD3NLO95772 234 aa20.72■□□□□ 0.91
SCNN1A-218ENST00000542436 DLEC1Q9Y238 1755 aa20.7■□□□□ 0.9
SCNN1A-218ENST00000542436 KIF3CO14782 793 aa20.7■□□□□ 0.9
SCNN1A-218ENST00000542436 HSPA6P17066 643 aa20.7■□□□□ 0.9
SCNN1A-218ENST00000542436 TEX13AQ9BXU3 409 aaPredicted RBP20.7■□□□□ 0.9
SCNN1A-218ENST00000542436 NFIXQ14938 502 aa20.69■□□□□ 0.9
SCNN1A-218ENST00000542436 ZNF790Q6PG37 636 aa20.69■□□□□ 0.9
SCNN1A-218ENST00000542436 SCN7AQ01118 1682 aa20.69■□□□□ 0.9
SCNN1A-218ENST00000542436 HEG1Q9ULI3 1381 aa20.69■□□□□ 0.9
SCNN1A-218ENST00000542436 A0A087WZG4 1122 aa20.68■□□□□ 0.9
SCNN1A-218ENST00000542436 CANXP27824 592 aaKnown RBP20.68■□□□□ 0.9
SCNN1A-218ENST00000542436 NUDCQ9Y266 331 aa20.68■□□□□ 0.9
SCNN1A-218ENST00000542436 CHRNA5P30532 468 aa20.67■□□□□ 0.9
SCNN1A-218ENST00000542436 C9orf131Q5VYM1 1079 aa20.67■□□□□ 0.9
SCNN1A-218ENST00000542436 IL17REQ8NFR9 667 aa20.67■□□□□ 0.9
SCNN1A-218ENST00000542436 SERPINB2P05120 415 aa20.66■□□□□ 0.9
SCNN1A-218ENST00000542436 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
SCNN1A-218ENST00000542436 ZNF496Q96IT1 587 aaPredicted RBP20.66■□□□□ 0.9
SCNN1A-218ENST00000542436 FMNL2Q96PY5 1086 aa20.66■□□□□ 0.9
SCNN1A-218ENST00000542436 CEMIPQ8WUJ3 1361 aa20.66■□□□□ 0.9
SCNN1A-218ENST00000542436 TOMM70O94826 608 aa20.65■□□□□ 0.9
SCNN1A-218ENST00000542436 PRKAR2BP31323 418 aa20.65■□□□□ 0.9
SCNN1A-218ENST00000542436 EIF5P55010 431 aaKnown RBP20.65■□□□□ 0.9
SCNN1A-218ENST00000542436 BCL2L12Q9HB09 334 aa20.65■□□□□ 0.9
SCNN1A-218ENST00000542436 RSPH6AQ9H0K4 717 aa20.64■□□□□ 0.89
SCNN1A-218ENST00000542436 SBF1O95248 1867 aa20.63■□□□□ 0.89
SCNN1A-218ENST00000542436 KDM2BQ8NHM5 1336 aa20.63■□□□□ 0.89
SCNN1A-218ENST00000542436 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
SCNN1A-218ENST00000542436 RNF181Q9P0P0 153 aa20.63■□□□□ 0.89
SCNN1A-218ENST00000542436 TNRC6CQ9HCJ0 1690 aaKnown RBP20.63■□□□□ 0.89
SCNN1A-218ENST00000542436 BTBD11A6QL63 1104 aa20.62■□□□□ 0.89
SCNN1A-218ENST00000542436 RTF1Q92541 710 aaKnown RBP20.62■□□□□ 0.89
SCNN1A-218ENST00000542436 ZNF330Q9Y3S2 320 aaPredicted RBP20.62■□□□□ 0.89
SCNN1A-218ENST00000542436 H0YIN7 160 aa20.61■□□□□ 0.89
SCNN1A-218ENST00000542436 C16orf71Q8IYS4 520 aaPredicted RBP20.61■□□□□ 0.89
SCNN1A-218ENST00000542436 BCORQ6W2J9 1755 aa20.61■□□□□ 0.89
SCNN1A-218ENST00000542436 CARMIL3Q8ND23 1372 aa20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 ZC3H4Q9UPT8 1303 aaKnown RBP20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 BICDL1Q6ZP65 573 aa20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 NMRK2Q9NPI5 230 aa20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 PDZRN3Q9UPQ7 1066 aa20.6■□□□□ 0.89
SCNN1A-218ENST00000542436 C2CD5Q86YS7 1000 aa20.59■□□□□ 0.89
SCNN1A-218ENST00000542436 TTLL6Q8N841 843 aa20.59■□□□□ 0.89
SCNN1A-218ENST00000542436 APLP1P51693 650 aa20.58■□□□□ 0.89
SCNN1A-218ENST00000542436 TBC1D9BQ66K14 1250 aa20.58■□□□□ 0.89
SCNN1A-218ENST00000542436 ANKRD31Q8N7Z5 1873 aa20.58■□□□□ 0.88
SCNN1A-218ENST00000542436 PDE6BP35913 854 aa20.57■□□□□ 0.88
SCNN1A-218ENST00000542436 TIAM2Q8IVF5 1701 aa20.57■□□□□ 0.88
SCNN1A-218ENST00000542436 TBC1D2BQ9UPU7 963 aa20.57■□□□□ 0.88
SCNN1A-218ENST00000542436 NPHP1O15259 732 aa20.56■□□□□ 0.88
SCNN1A-218ENST00000542436 RBM46Q8TBY0 533 aaKnown RBP20.56■□□□□ 0.88
SCNN1A-218ENST00000542436 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
SCNN1A-218ENST00000542436 A1BGP04217 495 aa20.55■□□□□ 0.88
SCNN1A-218ENST00000542436 NEFMP07197 916 aa20.55■□□□□ 0.88
SCNN1A-218ENST00000542436 LMNB1P20700 586 aa20.55■□□□□ 0.88
SCNN1A-218ENST00000542436 RASSF7Q02833 373 aa20.55■□□□□ 0.88
SCNN1A-218ENST00000542436 SETDB2Q96T68 719 aa20.55■□□□□ 0.88
SCNN1A-218ENST00000542436 BRIP1Q9BX63 1249 aa20.55■□□□□ 0.88
SCNN1A-218ENST00000542436 COL11A2P13942 1736 aaPredicted RBP20.55■□□□□ 0.88
SCNN1A-218ENST00000542436 WDR90Q96KV7 1748 aa20.54■□□□□ 0.88
SCNN1A-218ENST00000542436 DZIP3Q86Y13 1208 aaKnown RBP20.54■□□□□ 0.88
SCNN1A-218ENST00000542436 KCNQ3O43525 872 aa20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 CAMTA2O94983 1202 aa20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 ST5P78524 1137 aa20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 FSTL1Q12841 308 aa20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 PRR5LQ6MZQ0 368 aa20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 MCM10Q7L590 875 aa20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 CNBD1Q8NA66 436 aa20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 CCDC88AQ3V6T2 1871 aa20.53■□□□□ 0.88
SCNN1A-218ENST00000542436 LAMB4A4D0S4 1761 aa20.52■□□□□ 0.88
SCNN1A-218ENST00000542436 ZNF622Q969S3 477 aaKnown RBP eCLIP20.52■□□□□ 0.88
SCNN1A-218ENST00000542436 ZNF652Q9Y2D9 606 aa20.52■□□□□ 0.88
SCNN1A-218ENST00000542436 ARFGEF2Q9Y6D5 1785 aa20.51■□□□□ 0.87
SCNN1A-218ENST00000542436 RRAGCQ9HB90 399 aa20.51■□□□□ 0.87
SCNN1A-218ENST00000542436 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
SCNN1A-218ENST00000542436 CACNA1SQ13698 1873 aa20.5■□□□□ 0.87
SCNN1A-218ENST00000542436 DLG5Q8TDM6 1919 aa20.49■□□□□ 0.87
SCNN1A-218ENST00000542436 CLEC4GQ6UXB4 293 aa20.49■□□□□ 0.87
SCNN1A-218ENST00000542436 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
SCNN1A-218ENST00000542436 GLTPD2A6NH11 291 aa20.48■□□□□ 0.87
SCNN1A-218ENST00000542436 DCTN1Q14203 1278 aa20.48■□□□□ 0.87
SCNN1A-218ENST00000542436 DICER1Q9UPY3 1922 aaKnown RBP20.48■□□□□ 0.87
SCNN1A-218ENST00000542436 NFKBIEO00221 500 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms