RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 KIAA1551Q9HCM1 1747 aa24.23■■□□□ 1.47
PTPN6-216ENST00000542277 IFFO2Q5TF58 517 aa24.22■■□□□ 1.47
PTPN6-216ENST00000542277 U2SURPO15042 1029 aaKnown RBP24.21■■□□□ 1.47
PTPN6-216ENST00000542277 SERPINB2P05120 415 aa24.2■■□□□ 1.46
PTPN6-216ENST00000542277 RNF181Q9P0P0 153 aa24.2■■□□□ 1.46
PTPN6-216ENST00000542277 STARD3NLO95772 234 aa24.18■■□□□ 1.46
PTPN6-216ENST00000542277 APLP1P51693 650 aa24.18■■□□□ 1.46
PTPN6-216ENST00000542277 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
PTPN6-216ENST00000542277 DNAJC5GQ8N7S2 189 aa24.18■■□□□ 1.46
PTPN6-216ENST00000542277 ZNF496Q96IT1 587 aaPredicted RBP24.18■■□□□ 1.46
PTPN6-216ENST00000542277 RRAGCQ9HB90 399 aa24.17■■□□□ 1.46
PTPN6-216ENST00000542277 COL15A1P39059 1388 aa24.16■■□□□ 1.46
PTPN6-216ENST00000542277 TJP1Q07157 1748 aa24.16■■□□□ 1.46
PTPN6-216ENST00000542277 GNAT3A8MTJ3 354 aa24.16■■□□□ 1.46
PTPN6-216ENST00000542277 BICDL1Q6ZP65 573 aa24.16■■□□□ 1.46
PTPN6-216ENST00000542277 TTC5Q8N0Z6 440 aa24.16■■□□□ 1.46
PTPN6-216ENST00000542277 ZNF790Q6PG37 636 aa24.15■■□□□ 1.46
PTPN6-216ENST00000542277 SCN11AQ9UI33 1791 aa24.15■■□□□ 1.46
PTPN6-216ENST00000542277 KCPQ6ZWJ8 1503 aa24.15■■□□□ 1.46
PTPN6-216ENST00000542277 TEFQ10587 303 aa24.14■■□□□ 1.45
PTPN6-216ENST00000542277 GAS2L2Q8NHY3 880 aa24.14■■□□□ 1.45
PTPN6-216ENST00000542277 RBM46Q8TBY0 533 aaKnown RBP24.14■■□□□ 1.45
PTPN6-216ENST00000542277 PHACTR3Q96KR7 559 aa24.14■■□□□ 1.45
PTPN6-216ENST00000542277 MRC1P22897 1456 aa24.13■■□□□ 1.45
PTPN6-216ENST00000542277 PRELPP51888 382 aa24.13■■□□□ 1.45
PTPN6-216ENST00000542277 RASSF7Q02833 373 aa24.13■■□□□ 1.45
PTPN6-216ENST00000542277 C2CD5Q86YS7 1000 aa24.13■■□□□ 1.45
PTPN6-216ENST00000542277 TBC1D2BQ9UPU7 963 aa24.13■■□□□ 1.45
PTPN6-216ENST00000542277 A0A087WZG4 1122 aa24.12■■□□□ 1.45
PTPN6-216ENST00000542277 TBC1D9BQ66K14 1250 aa24.12■■□□□ 1.45
PTPN6-216ENST00000542277 C16orf71Q8IYS4 520 aaPredicted RBP24.12■■□□□ 1.45
PTPN6-216ENST00000542277 TTLL6Q8N841 843 aa24.12■■□□□ 1.45
PTPN6-216ENST00000542277 TEX13AQ9BXU3 409 aaPredicted RBP24.12■■□□□ 1.45
PTPN6-216ENST00000542277 NPC1L1Q9UHC9 1359 aa24.12■■□□□ 1.45
PTPN6-216ENST00000542277 ADAMTS7Q9UKP4 1686 aa24.11■■□□□ 1.45
PTPN6-216ENST00000542277 KDM2BQ8NHM5 1336 aa24.11■■□□□ 1.45
PTPN6-216ENST00000542277 KCNQ3O43525 872 aa24.11■■□□□ 1.45
PTPN6-216ENST00000542277 A1BGP04217 495 aa24.11■■□□□ 1.45
PTPN6-216ENST00000542277 H0YIN7 160 aa24.1■■□□□ 1.45
PTPN6-216ENST00000542277 HTRA3P83110 453 aa24.1■■□□□ 1.45
PTPN6-216ENST00000542277 CCDC24Q8N4L8 307 aa24.1■■□□□ 1.45
PTPN6-216ENST00000542277 HEG1Q9ULI3 1381 aa24.09■■□□□ 1.45
PTPN6-216ENST00000542277 ZNF330Q9Y3S2 320 aaPredicted RBP24.09■■□□□ 1.45
PTPN6-216ENST00000542277 LMNB1P20700 586 aa24.07■■□□□ 1.44
PTPN6-216ENST00000542277 PRKAR2BP31323 418 aa24.07■■□□□ 1.44
PTPN6-216ENST00000542277 FSTL1Q12841 308 aa24.07■■□□□ 1.44
PTPN6-216ENST00000542277 FMNL2Q96PY5 1086 aa24.07■■□□□ 1.44
PTPN6-216ENST00000542277 BRCA1P38398 1863 aaKnown RBP24.07■■□□□ 1.44
PTPN6-216ENST00000542277 COL3A1P02461 1466 aaPredicted RBP24.07■■□□□ 1.44
PTPN6-216ENST00000542277 CARMIL3Q8ND23 1372 aa24.06■■□□□ 1.44
PTPN6-216ENST00000542277 BTBD11A6QL63 1104 aa24.06■■□□□ 1.44
PTPN6-216ENST00000542277 IL6STP40189 918 aaPredicted RBP24.06■■□□□ 1.44
PTPN6-216ENST00000542277 BRIP1Q9BX63 1249 aa24.06■■□□□ 1.44
PTPN6-216ENST00000542277 RSPH6AQ9H0K4 717 aa24.06■■□□□ 1.44
PTPN6-216ENST00000542277 ZNF622Q969S3 477 aaKnown RBP eCLIP24.05■■□□□ 1.44
PTPN6-216ENST00000542277 USP16Q9Y5T5 823 aa24.05■■□□□ 1.44
PTPN6-216ENST00000542277 NFKBIEO00221 500 aa24.04■■□□□ 1.44
PTPN6-216ENST00000542277 PRR5LQ6MZQ0 368 aa24.04■■□□□ 1.44
PTPN6-216ENST00000542277 GLTPD2A6NH11 291 aa24.03■■□□□ 1.44
PTPN6-216ENST00000542277 ZNF219Q9P2Y4 722 aaPredicted RBP24.03■■□□□ 1.44
PTPN6-216ENST00000542277 CEMIPQ8WUJ3 1361 aa24.03■■□□□ 1.44
PTPN6-216ENST00000542277 CAMTA2O94983 1202 aa24.02■■□□□ 1.44
PTPN6-216ENST00000542277 PDE6BP35913 854 aa24.02■■□□□ 1.44
PTPN6-216ENST00000542277 PIP4K2AP48426 406 aaPredicted RBP24.02■■□□□ 1.44
PTPN6-216ENST00000542277 CFAP53Q96M91 514 aa24.02■■□□□ 1.44
PTPN6-216ENST00000542277 ARFGEF1Q9Y6D6 1849 aa24.02■■□□□ 1.44
PTPN6-216ENST00000542277 PRAMEF22A3QJZ6 481 aa24.01■■□□□ 1.43
PTPN6-216ENST00000542277 C21orf2O43822 256 aa24.01■■□□□ 1.43
PTPN6-216ENST00000542277 SETDB2Q96T68 719 aa24.01■■□□□ 1.43
PTPN6-216ENST00000542277 U2AF1L5P0DN76 240 aaPredicted RBP24■■□□□ 1.43
PTPN6-216ENST00000542277 VEGFAP15692 232 aaPredicted RBP24■■□□□ 1.43
PTPN6-216ENST00000542277 U2AF1Q01081 240 aaKnown RBP eCLIP24■■□□□ 1.43
PTPN6-216ENST00000542277 MCM10Q7L590 875 aa24■■□□□ 1.43
PTPN6-216ENST00000542277 NPM2Q86SE8 214 aaKnown RBP24■■□□□ 1.43
PTPN6-216ENST00000542277 NUDCQ9Y266 331 aa24■■□□□ 1.43
PTPN6-216ENST00000542277 ZC3H4Q9UPT8 1303 aaKnown RBP24■■□□□ 1.43
PTPN6-216ENST00000542277 PPP2R1AP30153 589 aa23.99■■□□□ 1.43
PTPN6-216ENST00000542277 PDZRN3Q9UPQ7 1066 aa23.99■■□□□ 1.43
PTPN6-216ENST00000542277 POTECB2RU33 542 aa23.98■■□□□ 1.43
PTPN6-216ENST00000542277 DZIP3Q86Y13 1208 aaKnown RBP23.98■■□□□ 1.43
PTPN6-216ENST00000542277 SMC1BQ8NDV3 1235 aa23.98■■□□□ 1.43
PTPN6-216ENST00000542277 KLRG1Q96E93 195 aa23.98■■□□□ 1.43
PTPN6-216ENST00000542277 DCTN1Q14203 1278 aa23.97■■□□□ 1.43
PTPN6-216ENST00000542277 AFDNP55196 1824 aaKnown RBP23.96■■□□□ 1.43
PTPN6-216ENST00000542277 RTF1Q92541 710 aaKnown RBP23.96■■□□□ 1.43
PTPN6-216ENST00000542277 NRXN2Q9P2S2 1712 aa23.96■■□□□ 1.43
PTPN6-216ENST00000542277 SNRPA1P09661 255 aaKnown RBP23.95■■□□□ 1.42
PTPN6-216ENST00000542277 CNBD1Q8NA66 436 aa23.95■■□□□ 1.42
PTPN6-216ENST00000542277 SRGNP10124 158 aa23.94■■□□□ 1.42
PTPN6-216ENST00000542277 JMYQ8N9B5 988 aa23.94■■□□□ 1.42
PTPN6-216ENST00000542277 SBF1O95248 1867 aa23.94■■□□□ 1.42
PTPN6-216ENST00000542277 NPHP1O15259 732 aa23.93■■□□□ 1.42
PTPN6-216ENST00000542277 ERFEQ4G0M1 354 aa23.93■■□□□ 1.42
PTPN6-216ENST00000542277 DPY19L2Q6NUT2 758 aa23.93■■□□□ 1.42
PTPN6-216ENST00000542277 NBPF26B4DH59 902 aa23.92■■□□□ 1.42
PTPN6-216ENST00000542277 STYK1Q6J9G0 422 aa23.92■■□□□ 1.42
PTPN6-216ENST00000542277 NBPF10Q6P3W6 841 aaKnown RBP23.92■■□□□ 1.42
PTPN6-216ENST00000542277 CLEC4GQ6UXB4 293 aa23.92■■□□□ 1.42
PTPN6-216ENST00000542277 NBPF15Q8N660 670 aa23.92■■□□□ 1.42
PTPN6-216ENST00000542277 CNKSR1Q969H4 720 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms