RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 FAM163AQ96GL9 167 aaPredicted RBP11.89□□□□□ -0.51
LDHA-220ENST00000542179 DCAF5Q96JK2 942 aa11.89□□□□□ -0.51
LDHA-220ENST00000542179 CDCA7Q9BWT1 371 aaPredicted RBP11.89□□□□□ -0.51
LDHA-220ENST00000542179 TSPYL4Q9UJ04 414 aa11.89□□□□□ -0.51
LDHA-220ENST00000542179 SCN11AQ9UI33 1791 aa11.88□□□□□ -0.51
LDHA-220ENST00000542179 G3V3G9 751 aa11.88□□□□□ -0.51
LDHA-220ENST00000542179 ECM2O94769 699 aaPredicted RBP11.88□□□□□ -0.51
LDHA-220ENST00000542179 TEFQ10587 303 aa11.88□□□□□ -0.51
LDHA-220ENST00000542179 FNBP4Q8N3X1 1017 aaPredicted RBP11.88□□□□□ -0.51
LDHA-220ENST00000542179 SPATA31A1Q5TZJ5 1347 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
LDHA-220ENST00000542179 KDM6AO15550 1401 aaPredicted RBP11.87□□□□□ -0.51
LDHA-220ENST00000542179 PDE3AQ14432 1141 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 TSPYL6Q8N831 410 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 SSH1Q8WYL5 1049 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 MIS18AQ9NYP9 233 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 VIRMAQ69YN4 1812 aaKnown RBP11.87□□□□□ -0.51
LDHA-220ENST00000542179 MRC1P22897 1456 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 KDM3BQ7LBC6 1761 aa11.87□□□□□ -0.51
LDHA-220ENST00000542179 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
LDHA-220ENST00000542179 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
LDHA-220ENST00000542179 LRP6O75581 1613 aa11.86□□□□□ -0.51
LDHA-220ENST00000542179 SHANK3Q9BYB0 1731 aa11.86□□□□□ -0.51
LDHA-220ENST00000542179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.86□□□□□ -0.51
LDHA-220ENST00000542179 PLIN1O60240 522 aa11.86□□□□□ -0.51
LDHA-220ENST00000542179 IRX6P78412 446 aaPredicted RBP11.86□□□□□ -0.51
LDHA-220ENST00000542179 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
LDHA-220ENST00000542179 ZFP91Q96JP5 570 aaPredicted RBP11.86□□□□□ -0.51
LDHA-220ENST00000542179 WNK3Q9BYP7 1800 aa11.86□□□□□ -0.51
LDHA-220ENST00000542179 BCL9LQ86UU0 1499 aa11.85□□□□□ -0.51
LDHA-220ENST00000542179 BTBD11A6QL63 1104 aa11.85□□□□□ -0.51
LDHA-220ENST00000542179 VPS72Q15906 364 aa11.85□□□□□ -0.51
LDHA-220ENST00000542179 BARGINQ6ZT62 677 aa11.85□□□□□ -0.51
LDHA-220ENST00000542179 NGLY1Q96IV0 654 aa11.85□□□□□ -0.51
LDHA-220ENST00000542179 SLC52A2Q9HAB3 445 aa11.85□□□□□ -0.51
LDHA-220ENST00000542179 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
LDHA-220ENST00000542179 USP35Q9P2H5 1018 aa11.85□□□□□ -0.51
LDHA-220ENST00000542179 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.84□□□□□ -0.51
LDHA-220ENST00000542179 ERVV-2B6SEH9 535 aa11.84□□□□□ -0.51
LDHA-220ENST00000542179 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
LDHA-220ENST00000542179 HOXB7P09629 217 aa11.84□□□□□ -0.51
LDHA-220ENST00000542179 MS4A1P11836 297 aa11.84□□□□□ -0.51
LDHA-220ENST00000542179 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
LDHA-220ENST00000542179 ARHGAP45Q92619 1136 aa11.84□□□□□ -0.51
LDHA-220ENST00000542179 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
LDHA-220ENST00000542179 PPP4R2Q9NY27 417 aa11.84□□□□□ -0.51
LDHA-220ENST00000542179 KIF16BQ96L93 1317 aa11.84□□□□□ -0.51
LDHA-220ENST00000542179 HEG1Q9ULI3 1381 aa11.83□□□□□ -0.52
LDHA-220ENST00000542179 EXOC5O00471 708 aa11.83□□□□□ -0.52
LDHA-220ENST00000542179 IPO8O15397 1037 aaKnown RBP11.83□□□□□ -0.52
LDHA-220ENST00000542179 EIF4A1P60842 406 aaKnown RBP11.83□□□□□ -0.52
LDHA-220ENST00000542179 KRT24Q2M2I5 525 aa11.83□□□□□ -0.52
LDHA-220ENST00000542179 ZKSCAN2Q63HK3 967 aa11.83□□□□□ -0.52
LDHA-220ENST00000542179 C8orf37Q96NL8 207 aa11.83□□□□□ -0.52
LDHA-220ENST00000542179 POTEMA6NI47 508 aa11.82□□□□□ -0.52
LDHA-220ENST00000542179 C20orf194Q5TEA3 1177 aa11.82□□□□□ -0.52
LDHA-220ENST00000542179 IFFO2Q5TF58 517 aa11.82□□□□□ -0.52
LDHA-220ENST00000542179 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
LDHA-220ENST00000542179 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
LDHA-220ENST00000542179 BCL2L13Q9BXK5 485 aa11.82□□□□□ -0.52
LDHA-220ENST00000542179 TNS2Q63HR2 1409 aa11.81□□□□□ -0.52
LDHA-220ENST00000542179 CANXP27824 592 aaKnown RBP11.81□□□□□ -0.52
LDHA-220ENST00000542179 CABP4P57796 275 aa11.81□□□□□ -0.52
LDHA-220ENST00000542179 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
LDHA-220ENST00000542179 POTEGQ6S5H5 508 aa11.81□□□□□ -0.52
LDHA-220ENST00000542179 ATF7IPQ6VMQ6 1270 aa11.81□□□□□ -0.52
LDHA-220ENST00000542179 EXOC6Q8TAG9 804 aa11.81□□□□□ -0.52
LDHA-220ENST00000542179 DDX54Q8TDD1 881 aaKnown RBP11.81□□□□□ -0.52
LDHA-220ENST00000542179 USP21Q9UK80 565 aa11.81□□□□□ -0.52
LDHA-220ENST00000542179 NOB1Q9ULX3 412 aaKnown RBP11.81□□□□□ -0.52
LDHA-220ENST00000542179 SNPHO15079 494 aa11.8□□□□□ -0.52
LDHA-220ENST00000542179 KCNQ3O43525 872 aa11.8□□□□□ -0.52
LDHA-220ENST00000542179 AAMPQ13685 434 aa11.8□□□□□ -0.52
LDHA-220ENST00000542179 CCDC30Q5VVM6 783 aa11.8□□□□□ -0.52
LDHA-220ENST00000542179 ZNF790Q6PG37 636 aa11.8□□□□□ -0.52
LDHA-220ENST00000542179 CRBNQ96SW2 442 aa11.8□□□□□ -0.52
LDHA-220ENST00000542179 TRIM27P14373 513 aa11.79□□□□□ -0.52
LDHA-220ENST00000542179 DDB1Q16531 1140 aa11.79□□□□□ -0.52
LDHA-220ENST00000542179 MEX3CQ5U5Q3 659 aaKnown RBP11.79□□□□□ -0.52
LDHA-220ENST00000542179 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
LDHA-220ENST00000542179 BOLA1Q9Y3E2 137 aa11.79□□□□□ -0.52
LDHA-220ENST00000542179 PTPRCP08575 1304 aa11.79□□□□□ -0.52
LDHA-220ENST00000542179 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
LDHA-220ENST00000542179 API5Q9BZZ5 524 aaKnown RBP11.78□□□□□ -0.52
LDHA-220ENST00000542179 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
LDHA-220ENST00000542179 CACNA1FO60840 1977 aa11.78□□□□□ -0.52
LDHA-220ENST00000542179 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.52
LDHA-220ENST00000542179 RLBP1P12271 317 aa11.77□□□□□ -0.53
LDHA-220ENST00000542179 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.53
LDHA-220ENST00000542179 PANK1Q8TE04 598 aa11.77□□□□□ -0.53
LDHA-220ENST00000542179 STK31Q9BXU1 1019 aa11.77□□□□□ -0.53
LDHA-220ENST00000542179 PAPPAQ13219 1627 aa11.76□□□□□ -0.53
LDHA-220ENST00000542179 TCERG1O14776 1098 aaKnown RBP11.76□□□□□ -0.53
LDHA-220ENST00000542179 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
LDHA-220ENST00000542179 SLC39A6Q13433 755 aa11.76□□□□□ -0.53
LDHA-220ENST00000542179 MVPQ14764 893 aaKnown RBP11.76□□□□□ -0.53
LDHA-220ENST00000542179 HDGFL1Q5TGJ6 251 aa11.76□□□□□ -0.53
LDHA-220ENST00000542179 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms