RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 ANXA1P04083 346 aa13.36□□□□□ -0.27
NECAP1-206ENST00000542095 SSH3Q8TE77 659 aa13.36□□□□□ -0.27
NECAP1-206ENST00000542095 HYPKQ9NX55 129 aa13.36□□□□□ -0.27
NECAP1-206ENST00000542095 MRC1P22897 1456 aa13.35□□□□□ -0.27
NECAP1-206ENST00000542095 FRAT2O75474 233 aaPredicted RBP13.35□□□□□ -0.27
NECAP1-206ENST00000542095 ZNF790Q6PG37 636 aa13.35□□□□□ -0.27
NECAP1-206ENST00000542095 RAB11FIP3O75154 756 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 KSR2Q6VAB6 950 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 KIF2CQ99661 725 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 AK9Q5TCS8 1911 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 ABCA3Q99758 1704 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 ALDH1L1O75891 902 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 HSP90AB1P08238 724 aaKnown RBP13.34□□□□□ -0.27
NECAP1-206ENST00000542095 MX1P20591 662 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 POLA2Q14181 598 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 PPP1R42Q7Z4L9 355 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
NECAP1-206ENST00000542095 HDAC5Q9UQL6 1122 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 MAP3K2Q9Y2U5 619 aa13.34□□□□□ -0.27
NECAP1-206ENST00000542095 PRAMEF22A3QJZ6 481 aa13.33□□□□□ -0.28
NECAP1-206ENST00000542095 DDX58O95786 925 aaKnown RBP13.33□□□□□ -0.28
NECAP1-206ENST00000542095 NBPF7P0C2Y1 421 aaPredicted RBP13.33□□□□□ -0.28
NECAP1-206ENST00000542095 PROSER3Q2NL68 480 aa13.33□□□□□ -0.28
NECAP1-206ENST00000542095 DCAF5Q96JK2 942 aa13.33□□□□□ -0.28
NECAP1-206ENST00000542095 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
NECAP1-206ENST00000542095 SOS2Q07890 1332 aaPredicted RBP13.32□□□□□ -0.28
NECAP1-206ENST00000542095 SRGAP3O43295 1099 aa13.32□□□□□ -0.28
NECAP1-206ENST00000542095 NFATC2IPQ8NCF5 419 aa13.32□□□□□ -0.28
NECAP1-206ENST00000542095 SLAIN2Q9P270 581 aa13.32□□□□□ -0.28
NECAP1-206ENST00000542095 AOX1Q06278 1338 aa13.32□□□□□ -0.28
NECAP1-206ENST00000542095 REC8O95072 547 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 SLC39A6Q13433 755 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 STAP2Q9UGK3 403 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 KDM4FA0A1W2PPD8 638 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 CYP27B1O15528 508 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
NECAP1-206ENST00000542095 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 C9orf78Q9NZ63 289 aaPredicted RBP13.31□□□□□ -0.28
NECAP1-206ENST00000542095 LAMB4A4D0S4 1761 aa13.31□□□□□ -0.28
NECAP1-206ENST00000542095 ZNF335Q9H4Z2 1342 aaPredicted RBP13.31□□□□□ -0.28
NECAP1-206ENST00000542095 TTC5Q8N0Z6 440 aa13.3□□□□□ -0.28
NECAP1-206ENST00000542095 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
NECAP1-206ENST00000542095 ERC2O15083 957 aa13.3□□□□□ -0.28
NECAP1-206ENST00000542095 RABEP1Q15276 862 aa13.3□□□□□ -0.28
NECAP1-206ENST00000542095 KIF1BPQ96EK5 621 aa13.3□□□□□ -0.28
NECAP1-206ENST00000542095 WDR17Q8IZU2 1322 aa13.3□□□□□ -0.28
NECAP1-206ENST00000542095 NHSL1Q5SYE7 1610 aa13.29□□□□□ -0.28
NECAP1-206ENST00000542095 PDIA6Q15084 440 aa13.29□□□□□ -0.28
NECAP1-206ENST00000542095 LINS1Q8NG48 757 aa13.29□□□□□ -0.28
NECAP1-206ENST00000542095 MTX1Q13505 466 aa13.29□□□□□ -0.28
NECAP1-206ENST00000542095 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
NECAP1-206ENST00000542095 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
NECAP1-206ENST00000542095 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
NECAP1-206ENST00000542095 CABP4P57796 275 aa13.28□□□□□ -0.28
NECAP1-206ENST00000542095 AIMP1Q12904 312 aaKnown RBP13.28□□□□□ -0.28
NECAP1-206ENST00000542095 TSHZ3Q63HK5 1081 aa13.28□□□□□ -0.28
NECAP1-206ENST00000542095 ZNF496Q96IT1 587 aaPredicted RBP13.28□□□□□ -0.28
NECAP1-206ENST00000542095 IL1RAPL2Q9NP60 686 aa13.28□□□□□ -0.28
NECAP1-206ENST00000542095 COL5A2P05997 1499 aaPredicted RBP13.28□□□□□ -0.28
NECAP1-206ENST00000542095 AFDNP55196 1824 aaKnown RBP13.28□□□□□ -0.28
NECAP1-206ENST00000542095 TOM1L2Q6ZVM7 507 aa13.28□□□□□ -0.28
NECAP1-206ENST00000542095 FMNL2Q96PY5 1086 aa13.28□□□□□ -0.28
NECAP1-206ENST00000542095 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.28
NECAP1-206ENST00000542095 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.28
NECAP1-206ENST00000542095 TRIM6-TRIM34B2RNG4 842 aa13.27□□□□□ -0.29
NECAP1-206ENST00000542095 GSE1Q14687 1217 aa13.27□□□□□ -0.29
NECAP1-206ENST00000542095 CWF19L2Q2TBE0 894 aaKnown RBP13.27□□□□□ -0.29
NECAP1-206ENST00000542095 LARP1Q6PKG0 1096 aaKnown RBP13.27□□□□□ -0.29
NECAP1-206ENST00000542095 RIC3Q7Z5B4 369 aa13.27□□□□□ -0.29
NECAP1-206ENST00000542095 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
NECAP1-206ENST00000542095 UTYO14607 1347 aa13.27□□□□□ -0.29
NECAP1-206ENST00000542095 GRM8O00222 908 aa13.27□□□□□ -0.29
NECAP1-206ENST00000542095 RILPL2Q969X0 211 aa13.27□□□□□ -0.29
NECAP1-206ENST00000542095 ARFGEF2Q9Y6D5 1785 aa13.26□□□□□ -0.29
NECAP1-206ENST00000542095 HSP90AA1P07900 732 aaKnown RBP13.26□□□□□ -0.29
NECAP1-206ENST00000542095 MYL6BP14649 208 aa13.26□□□□□ -0.29
NECAP1-206ENST00000542095 NEXNQ0ZGT2 675 aa13.26□□□□□ -0.29
NECAP1-206ENST00000542095 AEBP2Q6ZN18 517 aaPredicted RBP13.26□□□□□ -0.29
NECAP1-206ENST00000542095 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
NECAP1-206ENST00000542095 UBR2Q8IWV8 1755 aa13.26□□□□□ -0.29
NECAP1-206ENST00000542095 SHANK3Q9BYB0 1731 aa13.26□□□□□ -0.29
NECAP1-206ENST00000542095 CD2BP2O95400 341 aaKnown RBP13.25□□□□□ -0.29
NECAP1-206ENST00000542095 DDIT3P35638 169 aa13.25□□□□□ -0.29
NECAP1-206ENST00000542095 OS9Q13438 667 aaPredicted RBP13.25□□□□□ -0.29
NECAP1-206ENST00000542095 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
NECAP1-206ENST00000542095 ZCRB1Q8TBF4 217 aaKnown RBP13.25□□□□□ -0.29
NECAP1-206ENST00000542095 GLI3P10071 1580 aa13.25□□□□□ -0.29
NECAP1-206ENST00000542095 ERC1Q8IUD2 1116 aa13.25□□□□□ -0.29
NECAP1-206ENST00000542095 XAGE3Q8WTP9 111 aa13.25□□□□□ -0.29
NECAP1-206ENST00000542095 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
NECAP1-206ENST00000542095 CHMLP26374 656 aa13.24□□□□□ -0.29
NECAP1-206ENST00000542095 COPS6Q7L5N1 327 aa13.24□□□□□ -0.29
NECAP1-206ENST00000542095 CARD10Q9BWT7 1032 aa13.24□□□□□ -0.29
NECAP1-206ENST00000542095 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
NECAP1-206ENST00000542095 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
NECAP1-206ENST00000542095 USP16Q9Y5T5 823 aa13.24□□□□□ -0.29
NECAP1-206ENST00000542095 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms