RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TTC12Q9H892 705 aaPredicted RBP18.51■□□□□ 0.55
CNOT9-208ENST00000542068 CCDC9Q9Y3X0 531 aaKnown RBP18.51■□□□□ 0.55
CNOT9-208ENST00000542068 PRDM10Q9NQV6 1147 aa18.51■□□□□ 0.55
CNOT9-208ENST00000542068 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.51■□□□□ 0.55
CNOT9-208ENST00000542068 TBX22Q9Y458 520 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 PTPRUQ92729 1446 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 CHPF2Q9P2E5 772 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 SPG7Q9UQ90 795 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 SPATA31D1Q6ZQQ2 1576 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 NBPF6Q5VWK0 638 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 NBPF4Q96M43 638 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 TTC21AQ8NDW8 1320 aa18.5■□□□□ 0.55
CNOT9-208ENST00000542068 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
CNOT9-208ENST00000542068 DLC1Q96QB1 1528 aa18.49■□□□□ 0.55
CNOT9-208ENST00000542068 SBNO1A3KN83 1393 aa18.49■□□□□ 0.55
CNOT9-208ENST00000542068 CWC27Q6UX04 472 aaKnown RBP18.48■□□□□ 0.55
CNOT9-208ENST00000542068 CDC42BPGQ6DT37 1551 aa18.48■□□□□ 0.55
CNOT9-208ENST00000542068 ZNF500O60304 480 aaPredicted RBP18.48■□□□□ 0.55
CNOT9-208ENST00000542068 PPP1R42Q7Z4L9 355 aa18.48■□□□□ 0.55
CNOT9-208ENST00000542068 SYAP1Q96A49 352 aaPredicted RBP18.48■□□□□ 0.55
CNOT9-208ENST00000542068 ORAI2Q96SN7 254 aa18.48■□□□□ 0.55
CNOT9-208ENST00000542068 C9orf78Q9NZ63 289 aaPredicted RBP18.48■□□□□ 0.55
CNOT9-208ENST00000542068 BTBD11A6QL63 1104 aa18.48■□□□□ 0.55
CNOT9-208ENST00000542068 SRCIN1Q9C0H9 1055 aa18.48■□□□□ 0.55
CNOT9-208ENST00000542068 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
CNOT9-208ENST00000542068 KIF24Q5T7B8 1368 aa18.47■□□□□ 0.55
CNOT9-208ENST00000542068 ANKRD26Q9UPS8 1709 aa18.47■□□□□ 0.55
CNOT9-208ENST00000542068 DLG5Q8TDM6 1919 aa18.47■□□□□ 0.55
CNOT9-208ENST00000542068 BCL11BQ9C0K0 894 aaPredicted RBP18.47■□□□□ 0.55
CNOT9-208ENST00000542068 NBPF7P0C2Y1 421 aaPredicted RBP18.47■□□□□ 0.55
CNOT9-208ENST00000542068 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
CNOT9-208ENST00000542068 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
CNOT9-208ENST00000542068 MCM2P49736 904 aa18.46■□□□□ 0.55
CNOT9-208ENST00000542068 KIAA2012Q0VF49 1180 aa18.46■□□□□ 0.55
CNOT9-208ENST00000542068 HS1BP3Q53T59 392 aa18.46■□□□□ 0.55
CNOT9-208ENST00000542068 CSB-PGBD3P0DP91 1061 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 GIMAP6Q6P9H5 292 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 SPC24Q8NBT2 197 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 AGLP35573 1532 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 SIL1Q9H173 461 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 IGSF1Q8N6C5 1336 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 USP44Q9H0E7 712 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 OSBPL3Q9H4L5 887 aa18.45■□□□□ 0.54
CNOT9-208ENST00000542068 OVOS2A0A0J9YW53 1432 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 OVOS2Q6IE36 1432 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 KIAA0232Q92628 1395 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 CSPP1Q1MSJ5 1256 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 ANKLE2Q86XL3 938 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 ADCY5O95622 1261 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 MYL6BP14649 208 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 CUL4AQ13619 759 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 RASEFQ8IZ41 740 aa18.44■□□□□ 0.54
CNOT9-208ENST00000542068 WDR33Q9C0J8 1336 aaKnown RBP18.44■□□□□ 0.54
CNOT9-208ENST00000542068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.43■□□□□ 0.54
CNOT9-208ENST00000542068 PRAMEF22A3QJZ6 481 aa18.43■□□□□ 0.54
CNOT9-208ENST00000542068 VPS37CA5D8V6 355 aaPredicted RBP18.43■□□□□ 0.54
CNOT9-208ENST00000542068 KCNJ4P48050 445 aa18.43■□□□□ 0.54
CNOT9-208ENST00000542068 CCDC83Q8IWF9 413 aa18.43■□□□□ 0.54
CNOT9-208ENST00000542068 CRB1P82279 1406 aa18.43■□□□□ 0.54
CNOT9-208ENST00000542068 DDX17Q92841 729 aaKnown RBP18.43■□□□□ 0.54
CNOT9-208ENST00000542068 NLRP2Q9NX02 1062 aa18.43■□□□□ 0.54
CNOT9-208ENST00000542068 PA2G4Q9UQ80 394 aaKnown RBP18.43■□□□□ 0.54
CNOT9-208ENST00000542068 AK2P54819 239 aa18.42■□□□□ 0.54
CNOT9-208ENST00000542068 SLC39A6Q13433 755 aa18.42■□□□□ 0.54
CNOT9-208ENST00000542068 SMC3Q9UQE7 1217 aa18.42■□□□□ 0.54
CNOT9-208ENST00000542068 SASS6Q6UVJ0 657 aa18.42■□□□□ 0.54
CNOT9-208ENST00000542068 MAP3K5Q99683 1374 aa18.41■□□□□ 0.54
CNOT9-208ENST00000542068 CASTP20810 708 aaKnown RBP18.41■□□□□ 0.54
CNOT9-208ENST00000542068 CWF19L2Q2TBE0 894 aaKnown RBP18.41■□□□□ 0.54
CNOT9-208ENST00000542068 FERMT3Q86UX7 667 aa18.41■□□□□ 0.54
CNOT9-208ENST00000542068 ARHGEF10O15013 1369 aa18.41■□□□□ 0.54
CNOT9-208ENST00000542068 PHF14O94880 888 aa18.41■□□□□ 0.54
CNOT9-208ENST00000542068 LARGE1O95461 756 aa18.4■□□□□ 0.54
CNOT9-208ENST00000542068 TCEANC2Q96MN5 208 aa18.4■□□□□ 0.54
CNOT9-208ENST00000542068 NECAB1Q8N987 351 aa18.4■□□□□ 0.54
CNOT9-208ENST00000542068 SYT1P21579 422 aa18.4■□□□□ 0.54
CNOT9-208ENST00000542068 FAM173BQ6P4H8 233 aa18.4■□□□□ 0.54
CNOT9-208ENST00000542068 DNAAF4Q8WXU2 420 aa18.4■□□□□ 0.54
CNOT9-208ENST00000542068 SNX14Q9Y5W7 946 aa18.4■□□□□ 0.54
CNOT9-208ENST00000542068 CEP170BQ9Y4F5 1589 aaPredicted RBP18.39■□□□□ 0.53
CNOT9-208ENST00000542068 NRXN3Q9Y4C0 1643 aa18.39■□□□□ 0.53
CNOT9-208ENST00000542068 DNM1Q05193 864 aaKnown RBP18.39■□□□□ 0.53
CNOT9-208ENST00000542068 INTS4Q96HW7 963 aaKnown RBP18.39■□□□□ 0.53
CNOT9-208ENST00000542068 ZNF330Q9Y3S2 320 aaPredicted RBP18.39■□□□□ 0.53
CNOT9-208ENST00000542068 TECPR2O15040 1411 aa18.39■□□□□ 0.53
CNOT9-208ENST00000542068 STX6O43752 255 aa18.38■□□□□ 0.53
CNOT9-208ENST00000542068 CAMK4Q16566 473 aa18.38■□□□□ 0.53
CNOT9-208ENST00000542068 CABLES1Q8TDN4 633 aa18.38■□□□□ 0.53
CNOT9-208ENST00000542068 PLEKHO1Q53GL0 409 aaPredicted RBP18.38■□□□□ 0.53
CNOT9-208ENST00000542068 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
CNOT9-208ENST00000542068 RHPN1Q8TCX5 695 aa18.38■□□□□ 0.53
CNOT9-208ENST00000542068 MAP3K2Q9Y2U5 619 aa18.38■□□□□ 0.53
CNOT9-208ENST00000542068 ZSCAN22P10073 491 aaPredicted RBP18.38■□□□□ 0.53
CNOT9-208ENST00000542068 PROSER3Q2NL68 480 aa18.38■□□□□ 0.53
CNOT9-208ENST00000542068 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
CNOT9-208ENST00000542068 JAKMIP1Q96N16 626 aaKnown RBP18.38■□□□□ 0.53
CNOT9-208ENST00000542068 SALL3Q9BXA9 1300 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms