RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 PXDNQ92626 1479 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 F6X3S4 739 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 RNF214Q8ND24 703 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 OTUD7AQ8TE49 926 aaPredicted RBP11.19□□□□□ -0.62
THBS3-211ENST00000541990 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 RGPD2P0DJD1 1756 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 PTMSP20962 102 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 NCBP3Q53F19 620 aaKnown RBP11.19□□□□□ -0.62
THBS3-211ENST00000541990 TSC1Q92574 1164 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 IFT57Q9NWB7 429 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 TMEM63CQ9P1W3 806 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 SYCE3A1L190 88 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 CHL1O00533 1208 aa11.19□□□□□ -0.62
THBS3-211ENST00000541990 GOLGB1Q14789 3259 aaKnown RBP11.18□□□□□ -0.62
THBS3-211ENST00000541990 ZNF500O60304 480 aaPredicted RBP11.18□□□□□ -0.62
THBS3-211ENST00000541990 RAPGEF4Q8WZA2 1011 aa11.18□□□□□ -0.62
THBS3-211ENST00000541990 KDRP35968 1356 aa11.18□□□□□ -0.62
THBS3-211ENST00000541990 IPO8O15397 1037 aaKnown RBP11.18□□□□□ -0.62
THBS3-211ENST00000541990 CDC45O75419 566 aa11.18□□□□□ -0.62
THBS3-211ENST00000541990 ZKSCAN5Q9Y2L8 839 aa11.17□□□□□ -0.62
THBS3-211ENST00000541990 LTN1O94822 1766 aa11.17□□□□□ -0.62
THBS3-211ENST00000541990 SLC4A2P04920 1241 aa11.17□□□□□ -0.62
THBS3-211ENST00000541990 SLC4A10Q6U841 1118 aa11.17□□□□□ -0.62
THBS3-211ENST00000541990 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 PLEKHM2Q8IWE5 1019 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 NFATC2IPQ8NCF5 419 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 GCC1Q96CN9 775 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 RGPD5Q99666 1765 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 EP400Q96L91 3159 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 CYP27B1O15528 508 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 MRPL50Q8N5N7 158 aaKnown RBP11.16□□□□□ -0.62
THBS3-211ENST00000541990 DCCP43146 1447 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 DLG5Q8TDM6 1919 aa11.16□□□□□ -0.62
THBS3-211ENST00000541990 TEFQ10587 303 aa11.15□□□□□ -0.62
THBS3-211ENST00000541990 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.62
THBS3-211ENST00000541990 CRB1P82279 1406 aa11.15□□□□□ -0.62
THBS3-211ENST00000541990 KAT6BQ8WYB5 2073 aa11.15□□□□□ -0.62
THBS3-211ENST00000541990 TRPM3Q9HCF6 1732 aaPredicted RBP11.15□□□□□ -0.62
THBS3-211ENST00000541990 APBB1O00213 710 aa11.15□□□□□ -0.62
THBS3-211ENST00000541990 TERF1P54274 439 aa11.15□□□□□ -0.62
THBS3-211ENST00000541990 PLEKHO1Q53GL0 409 aaPredicted RBP11.15□□□□□ -0.62
THBS3-211ENST00000541990 USP26Q9BXU7 913 aa11.15□□□□□ -0.62
THBS3-211ENST00000541990 CCDC9Q9Y3X0 531 aaKnown RBP11.15□□□□□ -0.62
THBS3-211ENST00000541990 IL16Q14005 1332 aa11.15□□□□□ -0.62
THBS3-211ENST00000541990 MAP3K5Q99683 1374 aa11.15□□□□□ -0.62
THBS3-211ENST00000541990 BTBD11A6QL63 1104 aa11.15□□□□□ -0.63
THBS3-211ENST00000541990 RABEP1Q15276 862 aa11.15□□□□□ -0.63
THBS3-211ENST00000541990 PHAXQ9H814 394 aaKnown RBP11.15□□□□□ -0.63
THBS3-211ENST00000541990 FAM177BA6PVY3 158 aa11.14□□□□□ -0.63
THBS3-211ENST00000541990 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
THBS3-211ENST00000541990 MEGF6O75095 1541 aa11.14□□□□□ -0.63
THBS3-211ENST00000541990 RNMTO43148 476 aaKnown RBP11.14□□□□□ -0.63
THBS3-211ENST00000541990 SMARCA5O60264 1052 aaPredicted RBP11.14□□□□□ -0.63
THBS3-211ENST00000541990 TATP17735 454 aaPredicted RBP11.14□□□□□ -0.63
THBS3-211ENST00000541990 NUCB2P80303 420 aa11.14□□□□□ -0.63
THBS3-211ENST00000541990 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
THBS3-211ENST00000541990 HS1BP3Q53T59 392 aa11.14□□□□□ -0.63
THBS3-211ENST00000541990 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
THBS3-211ENST00000541990 TAF7Q15545 349 aaPredicted RBP11.13□□□□□ -0.63
THBS3-211ENST00000541990 FAM182BQ5T319 152 aa11.13□□□□□ -0.63
THBS3-211ENST00000541990 C17orf53Q8N3J3 647 aaPredicted RBP11.13□□□□□ -0.63
THBS3-211ENST00000541990 CAMTA1Q9Y6Y1 1673 aa11.13□□□□□ -0.63
THBS3-211ENST00000541990 TTC22Q5TAA0 569 aa11.13□□□□□ -0.63
THBS3-211ENST00000541990 LRSAM1Q6UWE0 723 aa11.13□□□□□ -0.63
THBS3-211ENST00000541990 ZNF830Q96NB3 372 aaPredicted RBP11.13□□□□□ -0.63
THBS3-211ENST00000541990 PROSER3Q2NL68 480 aa11.12□□□□□ -0.63
THBS3-211ENST00000541990 PTCD1O75127 700 aaKnown RBP11.12□□□□□ -0.63
THBS3-211ENST00000541990 RTL1A6NKG5 1358 aa11.12□□□□□ -0.63
THBS3-211ENST00000541990 ABCC4O15439 1325 aa11.12□□□□□ -0.63
THBS3-211ENST00000541990 SLIT3O75094 1523 aa11.12□□□□□ -0.63
THBS3-211ENST00000541990 RGPD1P0DJD0 1748 aa11.12□□□□□ -0.63
THBS3-211ENST00000541990 AIMP1Q12904 312 aaKnown RBP11.12□□□□□ -0.63
THBS3-211ENST00000541990 NOL8Q76FK4 1167 aaKnown RBP11.12□□□□□ -0.63
THBS3-211ENST00000541990 SYTL4Q96C24 671 aaPredicted RBP11.12□□□□□ -0.63
THBS3-211ENST00000541990 C8orf37Q96NL8 207 aa11.12□□□□□ -0.63
THBS3-211ENST00000541990 PODXL2Q9NZ53 605 aa11.12□□□□□ -0.63
THBS3-211ENST00000541990 SDSP20132 328 aa11.11□□□□□ -0.63
THBS3-211ENST00000541990 AKAP4Q5JQC9 854 aa11.11□□□□□ -0.63
THBS3-211ENST00000541990 GDPD2Q9HCC8 539 aa11.11□□□□□ -0.63
THBS3-211ENST00000541990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
THBS3-211ENST00000541990 DYNC1I1O14576 645 aa11.11□□□□□ -0.63
THBS3-211ENST00000541990 PHKG2P15735 406 aa11.11□□□□□ -0.63
THBS3-211ENST00000541990 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
THBS3-211ENST00000541990 SASS6Q6UVJ0 657 aa11.11□□□□□ -0.63
THBS3-211ENST00000541990 ALS2Q96Q42 1657 aa11.1□□□□□ -0.63
THBS3-211ENST00000541990 TOM1O60784 492 aa11.1□□□□□ -0.63
THBS3-211ENST00000541990 MYL6BP14649 208 aa11.1□□□□□ -0.63
THBS3-211ENST00000541990 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
THBS3-211ENST00000541990 ZNF710Q8N1W2 664 aa11.1□□□□□ -0.63
THBS3-211ENST00000541990 MAP7D2Q96T17 732 aa11.1□□□□□ -0.63
THBS3-211ENST00000541990 CHPF2Q9P2E5 772 aa11.1□□□□□ -0.63
THBS3-211ENST00000541990 SRCAPQ6ZRS2 3230 aa11.09□□□□□ -0.63
THBS3-211ENST00000541990 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
THBS3-211ENST00000541990 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
THBS3-211ENST00000541990 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
THBS3-211ENST00000541990 EIF4A1P60842 406 aaKnown RBP11.09□□□□□ -0.63
THBS3-211ENST00000541990 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
THBS3-211ENST00000541990 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
THBS3-211ENST00000541990 CCDC39Q9UFE4 941 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms