RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CALML4Q96GE6 196 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 AMPD3Q01432 767 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 CIZ1Q9ULV3 898 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-204ENST00000541819 KCNH5Q8NCM2 988 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 HMGB1P09429 215 aaKnown RBP12.42□□□□□ -0.42
GABRB3-204ENST00000541819 CCDC175P0C221 793 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 DNA2P51530 1060 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 SREK1Q8WXA9 508 aaKnown RBP12.42□□□□□ -0.42
GABRB3-204ENST00000541819 KIF1BPQ96EK5 621 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 PTPN14Q15678 1187 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 C8orf76Q96K31 380 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 FGD6Q6ZV73 1430 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 POGZQ7Z3K3 1410 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 C6orf163Q5TEZ5 329 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 ACTN2P35609 894 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 CATIPQ7Z7H3 387 aa12.42□□□□□ -0.42
GABRB3-204ENST00000541819 CCDC40Q4G0X9 1142 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 FAM114A1Q8IWE2 563 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 MTIF2P46199 727 aaKnown RBP12.41□□□□□ -0.42
GABRB3-204ENST00000541819 CABP5Q9NP86 173 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 PUF60Q9UHX1 559 aaKnown RBP12.41□□□□□ -0.42
GABRB3-204ENST00000541819 GAPVD1Q14C86 1478 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 PRC1O43663 620 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 GLRX3O76003 335 aaKnown RBP12.41□□□□□ -0.42
GABRB3-204ENST00000541819 SPECC1Q5M775 1068 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 RNF187Q5TA31 235 aaPredicted RBP12.41□□□□□ -0.42
GABRB3-204ENST00000541819 SYCP3Q8IZU3 236 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 DDX12PQ92771 950 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 GOLGA8BA8MQT2 603 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 IFIT5Q13325 482 aaKnown RBP12.41□□□□□ -0.42
GABRB3-204ENST00000541819 MYD88Q99836 296 aa12.41□□□□□ -0.42
GABRB3-204ENST00000541819 PRPF40BQ6NWY9 871 aaKnown RBP12.4□□□□□ -0.42
GABRB3-204ENST00000541819 PUS7Q96PZ0 661 aaKnown RBP12.4□□□□□ -0.42
GABRB3-204ENST00000541819 PRKCSHP14314 528 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-204ENST00000541819 TICAM2Q86XR7 235 aa12.4□□□□□ -0.42
GABRB3-204ENST00000541819 IKBKGQ9Y6K9 419 aa12.4□□□□□ -0.42
GABRB3-204ENST00000541819 POTEB2H3BUK9 544 aa12.4□□□□□ -0.42
GABRB3-204ENST00000541819 ZNF213O14771 459 aa12.4□□□□□ -0.42
GABRB3-204ENST00000541819 PPP1R14CQ8TAE6 165 aa12.4□□□□□ -0.42
GABRB3-204ENST00000541819 TCERG1LQ5VWI1 586 aa12.4□□□□□ -0.42
GABRB3-204ENST00000541819 SPTY2D1Q68D10 685 aaPredicted RBP12.4□□□□□ -0.42
GABRB3-204ENST00000541819 RAB3IL1Q8TBN0 382 aa12.4□□□□□ -0.42
GABRB3-204ENST00000541819 BICD1Q96G01 975 aa12.4□□□□□ -0.42
GABRB3-204ENST00000541819 ZNF644Q9H582 1327 aaPredicted RBP12.4□□□□□ -0.43
GABRB3-204ENST00000541819 LRRC27Q9C0I9 530 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 ZNF354CQ86Y25 554 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 CNNM3Q8NE01 707 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 PYM1Q9BRP8 204 aaKnown RBP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 SCAND2PQ9GZW5 306 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 SAMM50Q9Y512 469 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 ATAD2Q6PL18 1390 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 URI1O94763 535 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 ZC3H6P61129 1189 aaKnown RBP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 RRS1Q15050 365 aaKnown RBP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 SPECC1LQ69YQ0 1117 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 CFAP57Q96MR6 1250 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 TCP11L1Q9NUJ3 509 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 CTAGE5O15320 804 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 CCDC174Q6PII3 467 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 KIF18AQ8NI77 898 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
GABRB3-204ENST00000541819 HLA-DOAP06340 250 aa12.39□□□□□ -0.43
GABRB3-204ENST00000541819 MX1P20591 662 aa12.38□□□□□ -0.43
GABRB3-204ENST00000541819 KIF5BP33176 963 aa12.38□□□□□ -0.43
GABRB3-204ENST00000541819 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
GABRB3-204ENST00000541819 UTP14AQ9BVJ6 771 aaKnown RBP12.38□□□□□ -0.43
GABRB3-204ENST00000541819 FAM107BQ9H098 131 aa12.38□□□□□ -0.43
GABRB3-204ENST00000541819 PLEKHH1Q9ULM0 1364 aa12.38□□□□□ -0.43
GABRB3-204ENST00000541819 IFIT3O14879 490 aaKnown RBP12.38□□□□□ -0.43
GABRB3-204ENST00000541819 CCDC183Q5T5S1 534 aa12.38□□□□□ -0.43
GABRB3-204ENST00000541819 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
GABRB3-204ENST00000541819 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
GABRB3-204ENST00000541819 TRMT112Q9UI30 125 aaKnown RBP12.38□□□□□ -0.43
GABRB3-204ENST00000541819 MYO1BO43795 1136 aa12.38□□□□□ -0.43
GABRB3-204ENST00000541819 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
GABRB3-204ENST00000541819 PTCD1O75127 700 aaKnown RBP12.37□□□□□ -0.43
GABRB3-204ENST00000541819 FCHSD2O94868 740 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 LDHCP07864 332 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 CCDC172P0C7W6 258 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 IFI16Q16666 785 aaKnown RBP12.37□□□□□ -0.43
GABRB3-204ENST00000541819 SYNCQ9H7C4 482 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 SYCE3A1L190 88 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 FERMT3Q86UX7 667 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 NFE2L2Q16236 605 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 CLIP2Q9UDT6 1046 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 BRPF3Q9ULD4 1205 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 KAT14Q9H8E8 782 aa12.37□□□□□ -0.43
GABRB3-204ENST00000541819 TBCAO75347 108 aaKnown RBP12.36□□□□□ -0.43
GABRB3-204ENST00000541819 ARL1P40616 181 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms