RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 KIF16BQ96L93 1317 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 SIPA1L3O60292 1781 aaPredicted RBP8.36□□□□□ -1.07
VEGFB-203ENST00000541681 N4BP2Q86UW6 1770 aaPredicted RBP8.36□□□□□ -1.07
VEGFB-203ENST00000541681 SCN11AQ9UI33 1791 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 VAMP4O75379 141 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 GAS2L2Q8NHY3 880 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 SSH1Q8WYL5 1049 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 PIGBQ92521 554 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 SMARCC1Q92922 1105 aaPredicted RBP8.36□□□□□ -1.07
VEGFB-203ENST00000541681 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 SMC4Q9NTJ3 1288 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 WWC3Q9ULE0 1092 aa8.36□□□□□ -1.07
VEGFB-203ENST00000541681 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
VEGFB-203ENST00000541681 CHL1O00533 1208 aa8.35□□□□□ -1.07
VEGFB-203ENST00000541681 DZIP1LQ8IYY4 767 aaKnown RBP8.35□□□□□ -1.07
VEGFB-203ENST00000541681 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
VEGFB-203ENST00000541681 PANK1Q8TE04 598 aa8.35□□□□□ -1.07
VEGFB-203ENST00000541681 ARHGAP45Q92619 1136 aa8.35□□□□□ -1.07
VEGFB-203ENST00000541681 MBIPQ9NS73 344 aa8.35□□□□□ -1.07
VEGFB-203ENST00000541681 COG6Q9Y2V7 657 aa8.35□□□□□ -1.07
VEGFB-203ENST00000541681 LAS1LQ9Y4W2 734 aaKnown RBP8.35□□□□□ -1.07
VEGFB-203ENST00000541681 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
VEGFB-203ENST00000541681 LOC102724428A0A0B4J2F2 783 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 GNPATO15228 680 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 PHKG2P15735 406 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 SIK1P57059 783 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 MVPQ14764 893 aaKnown RBP8.34□□□□□ -1.07
VEGFB-203ENST00000541681 MTHFSDQ2M296 383 aaKnown RBP8.34□□□□□ -1.07
VEGFB-203ENST00000541681 ZNF530Q6P9A1 599 aaPredicted RBP8.34□□□□□ -1.07
VEGFB-203ENST00000541681 ATF7IPQ6VMQ6 1270 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 AMIGO3Q86WK7 504 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 IFNL2Q8IZJ0 200 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 LINC00116Q8NCU8 138 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 RTF1Q92541 710 aaKnown RBP8.34□□□□□ -1.07
VEGFB-203ENST00000541681 ASAP1Q9ULH1 1129 aa8.34□□□□□ -1.07
VEGFB-203ENST00000541681 RLBP1P12271 317 aa8.33□□□□□ -1.08
VEGFB-203ENST00000541681 ATP6V1AP38606 617 aa8.33□□□□□ -1.08
VEGFB-203ENST00000541681 TWISTNBQ3B726 338 aaPredicted RBP8.33□□□□□ -1.08
VEGFB-203ENST00000541681 FTSJ3Q8IY81 847 aaKnown RBP8.33□□□□□ -1.08
VEGFB-203ENST00000541681 MRPL50Q8N5N7 158 aaKnown RBP8.33□□□□□ -1.08
VEGFB-203ENST00000541681 FLAD1Q8NFF5 587 aa8.33□□□□□ -1.08
VEGFB-203ENST00000541681 RBM42Q9BTD8 480 aaKnown RBP8.33□□□□□ -1.08
VEGFB-203ENST00000541681 THUMPD2Q9BTF0 503 aaKnown RBP8.33□□□□□ -1.08
VEGFB-203ENST00000541681 BCL2L13Q9BXK5 485 aa8.33□□□□□ -1.08
VEGFB-203ENST00000541681 CHMP4BQ9H444 224 aaKnown RBP8.33□□□□□ -1.08
VEGFB-203ENST00000541681 BABAM1Q9NWV8 329 aa8.33□□□□□ -1.08
VEGFB-203ENST00000541681 NOB1Q9ULX3 412 aaKnown RBP8.33□□□□□ -1.08
VEGFB-203ENST00000541681 DDX19BQ9UMR2 479 aa8.33□□□□□ -1.08
VEGFB-203ENST00000541681 ADAMTS7Q9UKP4 1686 aa8.33□□□□□ -1.08
VEGFB-203ENST00000541681 KDM6AO15550 1401 aaPredicted RBP8.32□□□□□ -1.08
VEGFB-203ENST00000541681 GNAT3A8MTJ3 354 aa8.32□□□□□ -1.08
VEGFB-203ENST00000541681 TRIM27P14373 513 aa8.32□□□□□ -1.08
VEGFB-203ENST00000541681 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.08
VEGFB-203ENST00000541681 ITPK1Q13572 414 aa8.32□□□□□ -1.08
VEGFB-203ENST00000541681 DCTN1Q14203 1278 aa8.32□□□□□ -1.08
VEGFB-203ENST00000541681 C1orf141Q5JVX7 400 aa8.32□□□□□ -1.08
VEGFB-203ENST00000541681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.32□□□□□ -1.08
VEGFB-203ENST00000541681 SOS1Q07889 1333 aaPredicted RBP8.31□□□□□ -1.08
VEGFB-203ENST00000541681 HMGB2P26583 209 aaKnown RBP8.31□□□□□ -1.08
VEGFB-203ENST00000541681 CABP4P57796 275 aa8.31□□□□□ -1.08
VEGFB-203ENST00000541681 NKX1-1Q15270 411 aaPredicted RBP8.31□□□□□ -1.08
VEGFB-203ENST00000541681 PLEKHO1Q53GL0 409 aaPredicted RBP8.31□□□□□ -1.08
VEGFB-203ENST00000541681 MCM10Q7L590 875 aa8.31□□□□□ -1.08
VEGFB-203ENST00000541681 TSPYL6Q8N831 410 aa8.31□□□□□ -1.08
VEGFB-203ENST00000541681 C8orf58Q8NAV2 365 aa8.31□□□□□ -1.08
VEGFB-203ENST00000541681 RWDD1Q9H446 243 aaPredicted RBP8.31□□□□□ -1.08
VEGFB-203ENST00000541681 ATG3Q9NT62 314 aa8.31□□□□□ -1.08
VEGFB-203ENST00000541681 TNNQ9UQP3 1299 aa8.31□□□□□ -1.08
VEGFB-203ENST00000541681 CICQ96RK0 1608 aaPredicted RBP8.31□□□□□ -1.08
VEGFB-203ENST00000541681 C4AP0C0L4 1744 aa8.31□□□□□ -1.08
VEGFB-203ENST00000541681 COL5A3P25940 1745 aaPredicted RBP8.31□□□□□ -1.08
VEGFB-203ENST00000541681 GIGYF1O75420 1035 aaPredicted RBP8.3□□□□□ -1.08
VEGFB-203ENST00000541681 IGHDP01880 384 aa8.3□□□□□ -1.08
VEGFB-203ENST00000541681 HSP90AB1P08238 724 aaKnown RBP8.3□□□□□ -1.08
VEGFB-203ENST00000541681 SSFA2P28290 1259 aa8.3□□□□□ -1.08
VEGFB-203ENST00000541681 ZNF526Q8TF50 670 aaPredicted RBP8.3□□□□□ -1.08
VEGFB-203ENST00000541681 TJP1Q07157 1748 aa8.29□□□□□ -1.08
VEGFB-203ENST00000541681 GRIN3BO60391 1043 aa8.29□□□□□ -1.08
VEGFB-203ENST00000541681 PTCD1O75127 700 aaKnown RBP8.29□□□□□ -1.08
VEGFB-203ENST00000541681 AMOTQ4VCS5 1084 aa8.29□□□□□ -1.08
VEGFB-203ENST00000541681 DCAF5Q96JK2 942 aa8.29□□□□□ -1.08
VEGFB-203ENST00000541681 API5Q9BZZ5 524 aaKnown RBP8.29□□□□□ -1.08
VEGFB-203ENST00000541681 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
VEGFB-203ENST00000541681 CD2APQ9Y5K6 639 aa8.29□□□□□ -1.08
VEGFB-203ENST00000541681 PLEKHG2Q9H7P9 1386 aa8.29□□□□□ -1.08
VEGFB-203ENST00000541681 ERVV-2B6SEH9 535 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 ELL2O00472 640 aaPredicted RBP8.28□□□□□ -1.08
VEGFB-203ENST00000541681 MMP10P09238 476 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 PDE4AP27815 886 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 HDAC1Q13547 482 aaPredicted RBP8.28□□□□□ -1.08
VEGFB-203ENST00000541681 TAF7Q15545 349 aaPredicted RBP8.28□□□□□ -1.08
VEGFB-203ENST00000541681 ITPRIPQ8IWB1 547 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 TMEM57Q8N5G2 664 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 IL17REQ8NFR9 667 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 ZBTB40Q9NUA8 1239 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 TSPYL4Q9UJ04 414 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
VEGFB-203ENST00000541681 ATP10DQ9P241 1426 aa8.28□□□□□ -1.08
VEGFB-203ENST00000541681 ABCC4O15439 1325 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms