RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 GNAT3A8MTJ3 354 aa18.82■□□□□ 0.6
SUDS3-203ENST00000541591 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
SUDS3-203ENST00000541591 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
SUDS3-203ENST00000541591 USPL1Q5W0Q7 1092 aa18.82■□□□□ 0.6
SUDS3-203ENST00000541591 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
SUDS3-203ENST00000541591 LAMB4A4D0S4 1761 aa18.81■□□□□ 0.6
SUDS3-203ENST00000541591 KCNQ3O43525 872 aa18.81■□□□□ 0.6
SUDS3-203ENST00000541591 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
SUDS3-203ENST00000541591 TEFQ10587 303 aa18.81■□□□□ 0.6
SUDS3-203ENST00000541591 ZNF526Q8TF50 670 aaPredicted RBP18.81■□□□□ 0.6
SUDS3-203ENST00000541591 KDM3BQ7LBC6 1761 aa18.81■□□□□ 0.6
SUDS3-203ENST00000541591 COL11A2P13942 1736 aaPredicted RBP18.8■□□□□ 0.6
SUDS3-203ENST00000541591 DPEP1P16444 411 aa18.8■□□□□ 0.6
SUDS3-203ENST00000541591 TTC5Q8N0Z6 440 aa18.8■□□□□ 0.6
SUDS3-203ENST00000541591 ZNF496Q96IT1 587 aaPredicted RBP18.79■□□□□ 0.6
SUDS3-203ENST00000541591 BCS1LQ9Y276 419 aa18.79■□□□□ 0.6
SUDS3-203ENST00000541591 ZNF330Q9Y3S2 320 aaPredicted RBP18.79■□□□□ 0.6
SUDS3-203ENST00000541591 DCTN1Q14203 1278 aa18.78■□□□□ 0.6
SUDS3-203ENST00000541591 MCM10Q7L590 875 aa18.78■□□□□ 0.6
SUDS3-203ENST00000541591 ZPR1O75312 459 aa18.77■□□□□ 0.6
SUDS3-203ENST00000541591 HEG1Q9ULI3 1381 aa18.77■□□□□ 0.6
SUDS3-203ENST00000541591 CHRNA5P30532 468 aa18.76■□□□□ 0.59
SUDS3-203ENST00000541591 PIP4K2AP48426 406 aaPredicted RBP18.76■□□□□ 0.59
SUDS3-203ENST00000541591 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
SUDS3-203ENST00000541591 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
SUDS3-203ENST00000541591 CEMIPQ8WUJ3 1361 aa18.76■□□□□ 0.59
SUDS3-203ENST00000541591 PRAMEF22A3QJZ6 481 aa18.75■□□□□ 0.59
SUDS3-203ENST00000541591 POLRMTO00411 1230 aaKnown RBP18.75■□□□□ 0.59
SUDS3-203ENST00000541591 GIGYF1O75420 1035 aaPredicted RBP18.75■□□□□ 0.59
SUDS3-203ENST00000541591 BICDL1Q6ZP65 573 aa18.75■□□□□ 0.59
SUDS3-203ENST00000541591 BCL2L12Q9HB09 334 aa18.75■□□□□ 0.59
SUDS3-203ENST00000541591 ADCY9O60503 1353 aa18.75■□□□□ 0.59
SUDS3-203ENST00000541591 BTBD11A6QL63 1104 aa18.74■□□□□ 0.59
SUDS3-203ENST00000541591 FCHSD2O94868 740 aa18.74■□□□□ 0.59
SUDS3-203ENST00000541591 NARFQ9UHQ1 456 aa18.74■□□□□ 0.59
SUDS3-203ENST00000541591 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
SUDS3-203ENST00000541591 NUP98P52948 1817 aa18.73■□□□□ 0.59
SUDS3-203ENST00000541591 C1QTNF8P60827 252 aa18.73■□□□□ 0.59
SUDS3-203ENST00000541591 TGFB2P61812 414 aa18.73■□□□□ 0.59
SUDS3-203ENST00000541591 NFIXQ14938 502 aa18.73■□□□□ 0.59
SUDS3-203ENST00000541591 VSIG10Q8N0Z9 540 aa18.73■□□□□ 0.59
SUDS3-203ENST00000541591 TIAM2Q8IVF5 1701 aa18.73■□□□□ 0.59
SUDS3-203ENST00000541591 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
SUDS3-203ENST00000541591 A1BGP04217 495 aa18.72■□□□□ 0.59
SUDS3-203ENST00000541591 KCNA3P22001 575 aa18.72■□□□□ 0.59
SUDS3-203ENST00000541591 TM4SF1P30408 202 aa18.72■□□□□ 0.59
SUDS3-203ENST00000541591 ARHGAP27Q6ZUM4 889 aa18.72■□□□□ 0.59
SUDS3-203ENST00000541591 CCDC24Q8N4L8 307 aa18.71■□□□□ 0.59
SUDS3-203ENST00000541591 FMNL2Q96PY5 1086 aa18.71■□□□□ 0.59
SUDS3-203ENST00000541591 TBC1D2BQ9UPU7 963 aa18.71■□□□□ 0.59
SUDS3-203ENST00000541591 STARD3NLO95772 234 aa18.7■□□□□ 0.58
SUDS3-203ENST00000541591 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
SUDS3-203ENST00000541591 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
SUDS3-203ENST00000541591 ARFGEF2Q9Y6D5 1785 aa18.69■□□□□ 0.58
SUDS3-203ENST00000541591 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
SUDS3-203ENST00000541591 SERPINB2P05120 415 aa18.68■□□□□ 0.58
SUDS3-203ENST00000541591 TBC1D9BQ66K14 1250 aa18.68■□□□□ 0.58
SUDS3-203ENST00000541591 THUMPD2Q9BTF0 503 aaKnown RBP18.68■□□□□ 0.58
SUDS3-203ENST00000541591 GPBP1L1Q9HC44 474 aaPredicted RBP18.68■□□□□ 0.58
SUDS3-203ENST00000541591 USP16Q9Y5T5 823 aa18.68■□□□□ 0.58
SUDS3-203ENST00000541591 SLX4Q8IY92 1834 aa18.67■□□□□ 0.58
SUDS3-203ENST00000541591 DICER1Q9UPY3 1922 aaKnown RBP18.67■□□□□ 0.58
SUDS3-203ENST00000541591 DDX10Q13206 875 aaKnown RBP18.67■□□□□ 0.58
SUDS3-203ENST00000541591 PIM2Q9P1W9 311 aa18.66■□□□□ 0.58
SUDS3-203ENST00000541591 FER1L6Q2WGJ9 1857 aa18.66■□□□□ 0.58
SUDS3-203ENST00000541591 DALRD3Q5D0E6 543 aaKnown RBP18.65■□□□□ 0.58
SUDS3-203ENST00000541591 TNRC6CQ9HCJ0 1690 aaKnown RBP18.63■□□□□ 0.57
SUDS3-203ENST00000541591 A0A087WZG4 1122 aa18.63■□□□□ 0.57
SUDS3-203ENST00000541591 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
SUDS3-203ENST00000541591 RASSF7Q02833 373 aa18.63■□□□□ 0.57
SUDS3-203ENST00000541591 PLEKHF1Q96S99 279 aa18.63■□□□□ 0.57
SUDS3-203ENST00000541591 TEX13AQ9BXU3 409 aaPredicted RBP18.63■□□□□ 0.57
SUDS3-203ENST00000541591 CAMTA2O94983 1202 aa18.62■□□□□ 0.57
SUDS3-203ENST00000541591 C2CD5Q86YS7 1000 aa18.62■□□□□ 0.57
SUDS3-203ENST00000541591 ZNF219Q9P2Y4 722 aaPredicted RBP18.62■□□□□ 0.57
SUDS3-203ENST00000541591 C9orf131Q5VYM1 1079 aa18.61■□□□□ 0.57
SUDS3-203ENST00000541591 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
SUDS3-203ENST00000541591 MAPK8IP3Q9UPT6 1336 aa18.6■□□□□ 0.57
SUDS3-203ENST00000541591 NBPF26B4DH59 902 aa18.6■□□□□ 0.57
SUDS3-203ENST00000541591 NEFMP07197 916 aa18.6■□□□□ 0.57
SUDS3-203ENST00000541591 NFE2L2Q16236 605 aa18.6■□□□□ 0.57
SUDS3-203ENST00000541591 NBPF10Q6P3W6 841 aaKnown RBP18.6■□□□□ 0.57
SUDS3-203ENST00000541591 NBPF15Q8N660 670 aa18.6■□□□□ 0.57
SUDS3-203ENST00000541591 ANKRD36CQ5JPF3 1778 aa18.6■□□□□ 0.57
SUDS3-203ENST00000541591 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
SUDS3-203ENST00000541591 TAF7Q15545 349 aaPredicted RBP18.59■□□□□ 0.57
SUDS3-203ENST00000541591 PRR5LQ6MZQ0 368 aa18.59■□□□□ 0.57
SUDS3-203ENST00000541591 NPM2Q86SE8 214 aaKnown RBP18.59■□□□□ 0.57
SUDS3-203ENST00000541591 NGEFQ8N5V2 710 aa18.59■□□□□ 0.57
SUDS3-203ENST00000541591 FAM177BA6PVY3 158 aa18.58■□□□□ 0.56
SUDS3-203ENST00000541591 CCDC146Q8IYE0 955 aa18.58■□□□□ 0.56
SUDS3-203ENST00000541591 NMRK2Q9NPI5 230 aa18.58■□□□□ 0.56
SUDS3-203ENST00000541591 RNF181Q9P0P0 153 aa18.58■□□□□ 0.56
SUDS3-203ENST00000541591 KIF3CO14782 793 aa18.57■□□□□ 0.56
SUDS3-203ENST00000541591 NPHP1O15259 732 aa18.57■□□□□ 0.56
SUDS3-203ENST00000541591 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
SUDS3-203ENST00000541591 ZNF622Q969S3 477 aaKnown RBP eCLIP18.57■□□□□ 0.56
SUDS3-203ENST00000541591 RRP7AQ9Y3A4 280 aaKnown RBP18.57■□□□□ 0.56
SUDS3-203ENST00000541591 LAMB2P55268 1798 aa18.57■□□□□ 0.56
SUDS3-203ENST00000541591 PRELPP51888 382 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms